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setup.py
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setup.py

# -*- coding: utf-8 -*-
# @Author: Theo Lemaire
# @Email: theo.lemaire@epfl.ch
# @Date: 2017-06-13 09:40:02
# @Last Modified by: Theo Lemaire
# @Last Modified time: 2021-03-16 18:26:21
import os
from setuptools import setup
readme_file = 'README.md'
def readme():
with open(readme_file, encoding="utf8") as f:
return f.read()
def description():
with open(readme_file, encoding="utf8") as f:
started = False
lines = []
for line in f:
if not started:
if line.startswith('# Description'):
started = True
else:
if line.startswith('#'):
break
else:
lines.append(line)
return ''.join(lines).strip('\n')
def getFiles(path):
return [f'{path}/{x}' for x in os.listdir(path)]
setup(
name='PySONIC',
version='1.0',
description=description(),
long_description=readme(),
url='https://iopscience.iop.org/article/10.1088/1741-2552/ab1685',
classifiers=[
'Development Status :: 4 - Beta',
'Intended Audience :: Science/Research',
'Programming Language :: Python :: 3',
'Topic :: Scientific/Engineering :: Physics'
],
keywords=('SONIC NICE acoustic ultrasound ultrasonic neuromodulation neurostimulation excitation\
computational model intramembrane cavitation'),
author='Théo Lemaire',
author_email='theo.lemaire@epfl.ch',
license='MIT',
packages=['PySONIC'],
scripts=getFiles('scripts') + getFiles('tests'),
install_requires=[
'numpy>=1.10',
'scipy>=0.17',
'matplotlib>=2',
'pandas>=1.0.2',
'colorlog>=3.0.1',
'tqdm>=4.3',
'lockfile>=0.1.2',
'multiprocess>=0.70',
'pushbullet.py>=0.11.0',
'boltons>=20.1.0'
],
zip_safe=False
)

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