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install_pyeddl_GPU.sh
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Sat, Aug 31, 20:22
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R9868 DeepHealth_UC13_seizure_detection
install_pyeddl_GPU.sh
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#!/bin/sh
git clone --recurse-submodules https://github.com/deephealthproject/pyeddl.git
cd pyeddl/
git fetch --tags
git checkout tags/0.6.0
git submodule update --recursive
PYEDDL_FOLDER=$(pwd)
cd third_party/eddl
EIGEN_PATH=/scrap/users/$USER/miniconda3/envs/eddl/include/eigen3
export EDDL_WITH_PROTOBUF=OFF
export EDDL_DIR=/scrap/users/$USER/eddl
export CPATH="${EIGEN_PATH}:${CPATH}"
# Compiling eddl
mkdir build
cd build
cmake3 .. -DEDDL_SHARED=ON -DBUILD_TARGET=CPU -DCMAKE_CUDA_COMPILER=/usr/local/cuda-10.1/bin/nvcc -DBUILD_PROTOBUF=$EDDL_WITH_PROTOBUF -DBUILD_EXAMPLES=OFF -DBUILD_TESTS=OFF -DCMAKE_INSTALL_PREFIX=$EDDL_DIR
make -j$(nproc)
# Moving relevant files in /scrap/users/$USER/eddl/include and /scrap/users/$USER/eddl/lib
make install
cd $PYEDDL_FOLDER
python setup.py install
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