Diffusion genocrunch-2.1 9d7afc95513e

Debug R version Debug clustering Improved interval refresh for tables Debug…
9d7afc95513e
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Authored by rapin on Jun 6 2018, 09:32.

Description

Debug R version Debug clustering Improved interval refresh for tables Debug table searching

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Committed

rapin

Jun 6 2018, 09:32

Pushed

arapin

Jun 6 2018, 09:34

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R5853:5ee89126c133: Added a description view Added a link to stderr.log on the description view…

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rapin committed R5853:9d7afc95513e: Debug R version Debug clustering Improved interval refresh for tables Debug… (authored by rapin).Jun 6 2018, 09:32

Changes (88)

		Path
P		.gitignore Copied to .gitignore.keep
P		.gitignore.keep Copied from .gitignore
M		README.md
M		app/assets/images/genocrunch_pipeline.png
M		app/assets/javascripts/changes.js
M		app/assets/javascripts/correlationNetwork.js
M		app/assets/javascripts/form.js
M		app/assets/javascripts/general.js
M		app/assets/javascripts/heatmap.js
M		app/assets/javascripts/pca.js
M		app/assets/javascripts/pcoa.js
M		app/assets/javascripts/similarityNetwork.js
M		app/assets/stylesheets/general.css.scss
M		app/assets/stylesheets/index.css.scss
D		app/controllers/admins_controller.rb
M		app/controllers/examples_controller.rb
M		app/controllers/jobs_controller.rb
A		app/controllers/users_controller.rb
M		app/models/example.rb
D		app/views/admins
D		app/views/admins/_index.html.erb
D		app/views/admins/_users.html.erb
M		app/views/examples/_form.html.erb
M		app/views/examples/index.html.erb
M		app/views/examples/new.html.erb
M		app/views/examples/show.html.erb
M		app/views/home/_doc.html.erb
M		app/views/home/_doc_index.html.erb
M		app/views/home/doc.html.erb
M		app/views/home/reference.html.erb
M		app/views/home/terms.html.erb
M		app/views/home/tutorial.html.erb
M		app/views/jobs/_form.html.erb
M		app/views/jobs/_jobs.html.erb
M		app/views/jobs/_list_messages.html.erb
M		app/views/jobs/_refresh.html.erb
M		app/views/jobs/_standard_fig_layout.html.erb
M		app/views/jobs/_view_clustering.html.erb
M		app/views/jobs/_view_details.html.erb
M		app/views/jobs/_view_heatmap.html.erb
M		app/views/jobs/_view_map.html.erb
M		app/views/jobs/_view_primary_dataset.html.erb
M		app/views/jobs/_view_secondary_dataset.html.erb
M		app/views/jobs/edit.html.erb
M		app/views/jobs/index.html.erb
D		app/views/jobs/manage.js.erb
M		app/views/jobs/new.html.erb
M		app/views/jobs/show.html.erb
A		app/views/jobs/update_index.js.erb
M		app/views/layouts/application.html.erb
A		app/views/users/_users.html.erb
A		app/views/users/index.html.erb
M		app/views/users/registrations/edit.html.erb
M		app/views/users/registrations/new.html.erb
M		app/views/users/sessions/new.html.erb
M		app/views/versions/_form.html.erb
M		app/views/versions/index.html.erb
M		app/views/versions/new.html.erb
M		app/views/versions/show.html.erb
M		config/config.yml.keep
M		config/initializers/rucaptcha.rb
M		config/locales/devise.en.yml
M		config/routes.rb
A	(dir)	db/migrate/
A		db/migrate/20180528202114_update_database.rb
M		db/schema.rb
M		db/seeds.rb.keep
M		lib/genocrunch_console/bin/analyse_table.R
M		lib/genocrunch_console/bin/get_version.R
M		lib/genocrunch_console/bin/get_version.sh
M		lib/genocrunch_console/bin/modify_table.R
M		lib/genocrunch_console/bin/validate_format.R
M		lib/genocrunch_console/etc/genocrunchlib.json
M		lib/genocrunch_console/etc/packages_R.json
M		lib/genocrunch_console/lib/genocrunchlib.R
M		lib/genocrunch_console/lib/genocrunchlib.py
M		lib/genocrunch_console/lib/genocrunchlib.pyc
A		lib/tasks/cleanup.rake
A		lib/tasks/format_job_stderr.rake
A		lib/tasks/make_job_archive.rake
M		lib/tasks/run_job.rake
A		public/examples/mock_map_timepoints.txt
A		public/examples/mock_otus_table_timepoints.txt
D		public/examples/peerj32_description.txt
D		public/examples/peerj32_lipids.txt
D		public/examples/peerj32_map.txt
D		public/examples/peerj32_otus.txt
D		version_2018-03-23_12:26:24.467505.json