diff --git a/README.md b/README.md index 8bd1461..28891e3 100644 --- a/README.md +++ b/README.md @@ -1,24 +1,29 @@ +singularity-pipeline +=== + Description --- `singularity-pipeline` is a Python-based tool for describing, building and running Singularity container-based pipelines. This tool has been built as part of the Pipeline Interoperability initiative of the [EnhanceR project](https://www.enhancer.ch/). -PyPi: https://pypi.python.org/pypi/singularity-pipeline/ +PyPi: [https://pypi.python.org/pypi/singularity-pipeline/](https://pypi.python.org/pypi/singularity-pipeline/) + +Note that the script is still rough around the edges. Installing --- -``` +```bash pip install singularity-pipeline ``` Running --- See usage instructions with -``` +```bash singularity-pipeline help -``` \ No newline at end of file +```