{ "cells": [ { "cell_type": "markdown", "metadata": { "lines_to_next_cell": 0 }, "source": [ "# Formatting Cis-BP probability weight matrices to MEME\n", "\n", "## Goal:\n", "\n", "Prototype and convert probability weight matrices (PWMs) from Cis-BP to MEME format, for use with FIMO (to annotate gene and TE promoters) at a later stage. \n", "\n", "Documentation for the MEME format can be found [here](http://meme-suite.org/doc/meme-format.html).\n", "\n", "## Data provenance:\n", "\n", "The complete \"Homo Sapiens\" species archive was downloaded from , on 2020.06.15. \n", "The zipped directory was exported to the newly created directory `cisbp_homo_sapiens`.\n", "\n", "## New fields required in the MEME PWM format\n", "\n", "For MEME formatted PWMs, find the documentation [here](http://meme-suite.org/doc/meme-format.html).\n", "\n", "### Version number\n", "\n", "The version number of the MEME suite version we are using. We are using MEME version 5.1.1, therefore the field shoud be: \n", "`MEME version 5.1.1`\n", "\n", "### Alphabet\n", "\n", "It is possible to specify a custom alaphabet (for example with special characters other than ACGT for DNA), but we don't need it there. We use standard DNA alphabet. \n", "`ALPHABET= ACGT`\n", "\n", "### Background frequencies\n", "It is possible to specify the background frequency at two stages: either in the MEME PWMs or in a separate Markov Background Model Format text file, where only the 0-order is taken into account. We will use that option and set uniform background frequencies of 0.25 per nucleotide. \n", "\n", "- [documentation for Markov Background Model Format](http://meme-suite.org/doc/bfile-format.html)\n", "- [fasta-get-markov](http://meme-suite.org/doc/fasta-get-markov.html) generates Markov Background Model Format of any order.\n", "\n", "To set uniform background frequencies: \n", "`A 0.25 C 0.25 G 0.25 T 0.25`\n", "\n", "### Motif name line\n", "\n", "The unique motif identifier, we take it from the cisbp PMW filename. If the PWM is named `motif123.txt`, then the Motif name line contains: \n", "`MOTIF motif123`\n", "\n", "### Motif letter probability matrix lines\n", "\n", "Rows are positions in the motif, columns are letters in the alphabet (here the DNA, in the order specified in the alphabet)\n", "We do not define any optional value. Therefore, we only need to declare the matrix after the line: \n", "`letter-probability matrix:` \n", "... matrix goes here\n", "\n", "## Prototyping the conversion on a single PWM \n", "\n", "### Getting all the information from a Cis-BP-formatted PWM\n", "Parsing the PWM matrix text file. \n", "We sanity check the order of the columns to be `A C G T` to avoid bad surprises." ] }, { "cell_type": "code", "execution_count": 28, "metadata": {}, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ "M09104_2.00 /home/pulver/Workspace/cisbp-to-meme/cisbp_homo_sapiens/pwms_all_motifs/M09104_2.00.txt\n" ] } ], "source": [ "import os\n", "\n", "# relative paths\n", "project_rootdir = os.path.join(*os.getcwd().split(os.sep)[:-1])\n", "project_rootdir = '/'+project_rootdir # there must bet a cleaner way to add the first slash...\n", "\n", "pwms_cisbp_path = os.path.join(project_rootdir, 'cisbp_homo_sapiens/pwms_all_motifs/')\n", "\n", "# Random test motif: HOCOMOMCO FOXA2 motif\n", "cisbp_motif_filename = 'M09104_2.00.txt'\n", "\n", "# removing the extension (and the path) from the filename\n", "# code from https://stackoverflow.com/questions/678236/how-to-get-the-filename-without-the-extension-from-a-path-in-python\n", "from pathlib import Path\n", "motif_name = Path(cisbp_motif_filename).resolve().stem\n", "\n", "pwm_path = os.path.join(pwms_cisbp_path, cisbp_motif_filename)\n", "print(motif_name, pwm_path) " ] }, { "cell_type": "code", "execution_count": 29, "metadata": { "lines_to_next_cell": 0 }, "outputs": [ { "data": { "text/html": [ "
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PosACGT
010.1100.4000.1800.310
120.1680.3580.2540.220
230.1980.2660.1140.422
340.0460.0080.0020.944
450.3040.0140.6820.000
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" ], "text/plain": [ " Pos A C G T\n", "0 1 0.110 0.400 0.180 0.310\n", "1 2 0.168 0.358 0.254 0.220\n", "2 3 0.198 0.266 0.114 0.422\n", "3 4 0.046 0.008 0.002 0.944\n", "4 5 0.304 0.014 0.682 0.000\n", "5 6 0.008 0.004 0.004 0.984\n", "6 7 0.006 0.002 0.066 0.926\n", "7 8 0.000 0.000 0.296 0.704\n", "8 9 0.904 0.002 0.064 0.030\n", "9 10 0.004 0.908 0.002 0.086\n", "10 11 0.436 0.106 0.002 0.456\n", "11 12 0.096 0.286 0.098 0.520\n", "12 13 0.472 0.008 0.038 0.482" ] }, "execution_count": 29, "metadata": {}, "output_type": "execute_result" } ], "source": [ "import pandas as pd\n", "pwm_df = pd.read_csv(pwm_path, header=0, sep='\\t')\n", "pwm_df" ] }, { "cell_type": "markdown", "metadata": { "lines_to_next_cell": 0 }, "source": [ "The matrix section of the MEME formatted PWM is the content of this table without the position column (it is implicit) and without the header (it is specified in at the `ALPHABHET` line." ] }, { "cell_type": "code", "execution_count": 30, "metadata": {}, "outputs": [], "source": [ "# sanity checking that columns are always in the same order\n", "assert all(pwm_df.columns == pd.Index(['Pos', 'A', 'C', 'G', 'T'])),\\\n", "'Motif {}: the letters of the DNA alphabet are not in the correct order [A, C, G, T]'.format(motif_name)" ] }, { "cell_type": "code", "execution_count": 31, "metadata": { "lines_to_next_cell": 0 }, "outputs": [], "source": [ "# sanity checking that rowsums of the PWM sum up to 1 (within tolerance)\n", "import numpy as np\n", "\n", "assert all(pwm_df.drop(columns='Pos').apply(axis=1, func=lambda x: np.isclose(sum(x), 1))), \\\n", "'Motif {}: some rows in the PWM do not sum up to 1'.format(motif_name)" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "### Writing the Cis-BP PWM to MEME-format" ] }, { "cell_type": "code", "execution_count": 32, "metadata": { "lines_to_next_cell": 0 }, "outputs": [ { "data": { "text/plain": [ "['MOTIF M09104_2.00', 'letter-probability matrix:']" ] }, "execution_count": 32, "metadata": {}, "output_type": "execute_result" } ], "source": [ "meme_version_number = '5.1.1'\n", "meme_version_line = 'MEME version ' + meme_version_number\n", "\n", "alphabet_line = 'ALPHABET= ACGT'\n", "strands_line = 'strands: + -'\n", "background_letter_frequencies_lines = ['Background letter frequencies', 'A 0.25 C 0.25 G 0.25 T 0.25']\n", "\n", "motif_line = 'MOTIF ' + motif_name\n", "letter_probability_line = 'letter-probability matrix:'\n", "\n", "lines_head = [meme_version_line, alphabet_line, strands_line]\n", "lines_head.extend(background_letter_frequencies_lines)\n", "lines_before_matrix = [motif_line, letter_probability_line]\n", "\n", "[l for l in lines_before_matrix]" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "To write the PWM in MEME format:\n", "- create an output directory and file for all PWMs\n", "- write the `lines_before_matrix`\n", "- for each motif:\n", " - write the motif line\n", " - append `pmw_df` without index, header and the `Pos` column" ] }, { "cell_type": "code", "execution_count": 33, "metadata": {}, "outputs": [], "source": [ "pwms_meme_output_dir = os.path.join(project_rootdir, 'pwms_MEME')\n", "import shutil\n", "if os.path.exists(pwms_meme_output_dir):\n", " shutil.rmtree(pwms_meme_output_dir, ignore_errors=True)\n", "os.mkdir(pwms_meme_output_dir)\n", "motif_source = 'cisbp'\n", "outfile_path = os.path.join(pwms_meme_output_dir, 'pwms_'+motif_source+'_meme.txt')\n", "\n", "# head of the file (only written once for all motifs)\n", "with open(outfile_path, 'w') as f:\n", " [f.write(l+'\\n') for l in lines_head]\n", "\n", "# specific to each motif\n", "with open(outfile_path, 'a') as f:\n", " [f.write(l+'\\n') for l in lines_before_matrix]\n", "\n", "pwm_df[['A', 'C', 'G', 'T']]\\\n", ".round(6)\\\n", ".applymap('{:.6f}'.format)\\\n", ".to_csv(outfile_path, sep='\\t', index=None, header=None, mode='a')" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "## Testing the new MEME matrix with FIMO\n", "\n", "To make sure that the matrix behaves as expected, we will scan a mock fasta file (random DNA sequence + the consensus TF motif at base 7, counting with 1-indexing, and at position final base -7 -length of the motif for the reverse complement).\n", "\n", "The random DNA sequence was generated as a fasta file [here](https://www.bioinformatics.org/sms2/random_dna.html).\n", "\n", "The expected match is the following sequence (in capital letters): CCTTGTTTACTTT\n" ] }, { "cell_type": "code", "execution_count": 52, "metadata": {}, "outputs": [], "source": [ "motif_test_consensus = 'CCTTGTTTACTTT'\n", "motif_test_consensus_rev = 'AAAGTAAACAAGG'\n", "\n", "# deleting the fimo outdir if it already exists\n", "fimo_outdir = os.path.join(project_rootdir, 'fimo_out')\n", "if os.path.exists(fimo_outdir):\n", " shutil.rmtree(fimo_outdir, ignore_errors=True)\n", "\n", "# is fimo installed ?\n", "assert shutil.which('fimo') is not None, 'Error: please install FIMO 5.1.1 on this machine'\n", "\n", "# Running a test instance of FIMO:\n", "os.chdir(project_rootdir)\n", "os.system('fimo pwms_MEME/pwms_cisbp_meme.txt test_fimo/test_sequence.fa')\n", "os.chdir(os.path.join(project_rootdir, 'notebooks'))" ] }, { "cell_type": "code", "execution_count": 53, "metadata": {}, "outputs": [ { "data": { "text/html": [ "
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motif_idmotif_alt_idsequence_namestartstopstrandscorep-valueq-valuematched_sequence
0M09104_2.00NaNrandom985.0997.0-16.5962.290000e-080.000023CCTTGTTTACTTT
1M09104_2.00NaNrandom7.019.0+16.5962.290000e-080.000023CCTTGTTTACTTT
2# FIMO (Find Individual Motif Occurrences): Ve...NaNNaNNaNNaNNaNNaNNaNNaNNaN
3# The format of this file is described at http...NaNNaNNaNNaNNaNNaNNaNNaNNaN
4# fimo pwms_MEME/pwms_cisbp_meme.txt test_fimo...NaNNaNNaNNaNNaNNaNNaNNaNNaN
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" ], "text/plain": [ " motif_id motif_alt_id \\\n", "0 M09104_2.00 NaN \n", "1 M09104_2.00 NaN \n", "2 # FIMO (Find Individual Motif Occurrences): Ve... NaN \n", "3 # The format of this file is described at http... NaN \n", "4 # fimo pwms_MEME/pwms_cisbp_meme.txt test_fimo... NaN \n", "\n", " sequence_name start stop strand score p-value q-value \\\n", "0 random 985.0 997.0 - 16.596 2.290000e-08 0.000023 \n", "1 random 7.0 19.0 + 16.596 2.290000e-08 0.000023 \n", "2 NaN NaN NaN NaN NaN NaN NaN \n", "3 NaN NaN NaN NaN NaN NaN NaN \n", "4 NaN NaN NaN NaN NaN NaN NaN \n", "\n", " matched_sequence \n", "0 CCTTGTTTACTTT \n", "1 CCTTGTTTACTTT \n", "2 NaN \n", "3 NaN \n", "4 NaN " ] }, "execution_count": 53, "metadata": {}, "output_type": "execute_result" } ], "source": [ "fimo_test_out = pd.read_csv(os.path.join(project_rootdir, 'fimo_out/fimo.tsv'), sep='\\t', header=0)\n", "fimo_test_out" ] }, { "cell_type": "code", "execution_count": 54, "metadata": {}, "outputs": [], "source": [ "assert all(fimo_test_out['matched_sequence'].dropna() == ['CCTTGTTTACTTT', 'CCTTGTTTACTTT']),\\\n", "'Error: we do not find the expected number of motifs (2 motifs, one in reverse and one in forward)'" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "# Converting all Cis-BP PWMs to MEME format (into a single file)\n", "## Filtering on open-source human PWMs with direct experimental evidence\n", "Because all PWMs are always included, no matter the selection on Cis-BP, we need to filter out motifs:\n", "- Not from human TFs\n", "- Not with direct experimental evidence\n", "- from Transfac" ] }, { "cell_type": "code", "execution_count": 192, "metadata": { "scrolled": true }, "outputs": [ { "data": { "text/html": [ "
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TF_IDFamily_IDTSource_IDMotif_IDMSource_IDDBIDTF_NameTF_SpeciesTF_StatusFamily_Name...MSource_YearPMIDMSource_VersionSR_ModelSR_NoThresholdTfSource_NameTfSource_URLTfSource_YearTfSource_MonthTfSource_Day
0T010820_2.00F024_2.00TS12_2.00M02753_2.00MS33_2.00ENSG00000008196TFAP2BHomo_sapiensDAP-2...201323332764January 2013SequenceIdentityTrueEnsemblhttp://www.ensembl.org/2018Dec8
1T010820_2.00F024_2.00TS12_2.00M02754_2.00MS33_2.00ENSG00000008196TFAP2BHomo_sapiensDAP-2...201323332764January 2013SequenceIdentityTrueEnsemblhttp://www.ensembl.org/2018Dec8
2T010820_2.00F024_2.00TS12_2.00M02755_2.00MS33_2.00ENSG00000008196TFAP2BHomo_sapiensDAP-2...201323332764January 2013SequenceIdentityTrueEnsemblhttp://www.ensembl.org/2018Dec8
3T010820_2.00F024_2.00TS12_2.00M04046_2.00MS62_2.00ENSG00000008196TFAP2BHomo_sapiensDAP-2...201728473536April 2017SequenceIdentityTrueEnsemblhttp://www.ensembl.org/2018Dec8
4T010820_2.00F024_2.00TS12_2.00M04047_2.00MS62_2.00ENSG00000008196TFAP2BHomo_sapiensDAP-2...201728473536April 2017SequenceIdentityTrueEnsemblhttp://www.ensembl.org/2018Dec8
..................................................................
5856T350311_2.00F319_2.00TS12_2.00M11439_2.00MS59_2.00ENSG00000230257NFE4Homo_sapiensDUnknown...2006163818257.0SequenceIdentityTrueEnsemblhttp://www.ensembl.org/2018Dec8
5857T350312_2.00F319_2.00TS12_2.00M07782_2.00MS03_2.00ENSG00000243660ZNF487Homo_sapiensDUnknown...201829146583March 2018SequenceIdentityTrueEnsemblhttp://www.ensembl.org/2018Dec8
5858T350313_2.00F319_2.00TS12_2.00..ENSG00000243678NME2Homo_sapiensNUnknown......SequenceIdentityTrueEnsemblhttp://www.ensembl.org/2018Dec8
5859T350314_2.00F319_2.00TS12_2.00..ENSG00000276644DACH1Homo_sapiensNUnknown......SequenceIdentityTrueEnsemblhttp://www.ensembl.org/2018Dec8
5860T350315_2.00F319_2.00TS12_2.00..ENSG00000277258PCGF2Homo_sapiensNUnknown......SequenceIdentityTrueEnsemblhttp://www.ensembl.org/2018Dec8
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5861 rows × 28 columns

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" ], "text/plain": [ " TF_ID Family_ID TSource_ID Motif_ID MSource_ID \\\n", "0 T010820_2.00 F024_2.00 TS12_2.00 M02753_2.00 MS33_2.00 \n", "1 T010820_2.00 F024_2.00 TS12_2.00 M02754_2.00 MS33_2.00 \n", "2 T010820_2.00 F024_2.00 TS12_2.00 M02755_2.00 MS33_2.00 \n", "3 T010820_2.00 F024_2.00 TS12_2.00 M04046_2.00 MS62_2.00 \n", "4 T010820_2.00 F024_2.00 TS12_2.00 M04047_2.00 MS62_2.00 \n", "... ... ... ... ... ... \n", "5856 T350311_2.00 F319_2.00 TS12_2.00 M11439_2.00 MS59_2.00 \n", "5857 T350312_2.00 F319_2.00 TS12_2.00 M07782_2.00 MS03_2.00 \n", "5858 T350313_2.00 F319_2.00 TS12_2.00 . . \n", "5859 T350314_2.00 F319_2.00 TS12_2.00 . . \n", "5860 T350315_2.00 F319_2.00 TS12_2.00 . . \n", "\n", " DBID TF_Name TF_Species TF_Status Family_Name ... \\\n", "0 ENSG00000008196 TFAP2B Homo_sapiens D AP-2 ... \n", "1 ENSG00000008196 TFAP2B Homo_sapiens D AP-2 ... \n", "2 ENSG00000008196 TFAP2B Homo_sapiens D AP-2 ... \n", "3 ENSG00000008196 TFAP2B Homo_sapiens D AP-2 ... \n", "4 ENSG00000008196 TFAP2B Homo_sapiens D AP-2 ... \n", "... ... ... ... ... ... ... \n", "5856 ENSG00000230257 NFE4 Homo_sapiens D Unknown ... \n", "5857 ENSG00000243660 ZNF487 Homo_sapiens D Unknown ... \n", "5858 ENSG00000243678 NME2 Homo_sapiens N Unknown ... \n", "5859 ENSG00000276644 DACH1 Homo_sapiens N Unknown ... \n", "5860 ENSG00000277258 PCGF2 Homo_sapiens N Unknown ... \n", "\n", " MSource_Year PMID MSource_Version SR_Model SR_NoThreshold \\\n", "0 2013 23332764 January 2013 SequenceIdentity True \n", "1 2013 23332764 January 2013 SequenceIdentity True \n", "2 2013 23332764 January 2013 SequenceIdentity True \n", "3 2017 28473536 April 2017 SequenceIdentity True \n", "4 2017 28473536 April 2017 SequenceIdentity True \n", "... ... ... ... ... ... \n", "5856 2006 16381825 7.0 SequenceIdentity True \n", "5857 2018 29146583 March 2018 SequenceIdentity True \n", "5858 . . . SequenceIdentity True \n", "5859 . . . SequenceIdentity True \n", "5860 . . . SequenceIdentity True \n", "\n", " TfSource_Name TfSource_URL TfSource_Year TfSource_Month \\\n", "0 Ensembl http://www.ensembl.org/ 2018 Dec \n", "1 Ensembl http://www.ensembl.org/ 2018 Dec \n", "2 Ensembl http://www.ensembl.org/ 2018 Dec \n", "3 Ensembl http://www.ensembl.org/ 2018 Dec \n", "4 Ensembl http://www.ensembl.org/ 2018 Dec \n", "... ... ... ... ... \n", "5856 Ensembl http://www.ensembl.org/ 2018 Dec \n", "5857 Ensembl http://www.ensembl.org/ 2018 Dec \n", "5858 Ensembl http://www.ensembl.org/ 2018 Dec \n", "5859 Ensembl http://www.ensembl.org/ 2018 Dec \n", "5860 Ensembl http://www.ensembl.org/ 2018 Dec \n", "\n", " TfSource_Day \n", "0 8 \n", "1 8 \n", "2 8 \n", "3 8 \n", "4 8 \n", "... ... \n", "5856 8 \n", "5857 8 \n", "5858 8 \n", "5859 8 \n", "5860 8 \n", "\n", "[5861 rows x 28 columns]" ] }, "execution_count": 192, "metadata": {}, "output_type": "execute_result" } ], "source": [ "cisbp_metadata = pd.read_csv(os.path.join(project_rootdir, 'cisbp_homo_sapiens/TF_Information.txt'), sep='\\t', header=0)\n", "cisbp_metadata" ] }, { "cell_type": "code", "execution_count": 193, "metadata": {}, "outputs": [ { "data": { "text/plain": [ "Index(['TF_ID', 'Family_ID', 'TSource_ID', 'Motif_ID', 'MSource_ID', 'DBID',\n", " 'TF_Name', 'TF_Species', 'TF_Status', 'Family_Name', 'DBDs',\n", " 'DBD_Count', 'Cutoff', 'DBID.1', 'Motif_Type', 'MSource_Identifier',\n", " 'MSource_Type', 'MSource_Author', 'MSource_Year', 'PMID',\n", " 'MSource_Version', 'SR_Model', 'SR_NoThreshold', 'TfSource_Name',\n", " 'TfSource_URL', 'TfSource_Year', 'TfSource_Month', 'TfSource_Day'],\n", " dtype='object')" ] }, "execution_count": 193, "metadata": {}, "output_type": "execute_result" } ], "source": [ "cisbp_metadata.columns" ] }, { "cell_type": "code", "execution_count": 194, "metadata": { "scrolled": true }, "outputs": [ { "data": { "text/plain": [ "4126" ] }, "execution_count": 194, "metadata": {}, "output_type": "execute_result" } ], "source": [ "cisbp_metadata = cisbp_metadata[(cisbp_metadata['TF_Species']=='Homo_sapiens') & \\\n", "(cisbp_metadata['TF_Status']=='D') & \\\n", "(cisbp_metadata['Motif_Type']!='Transfac')].reset_index()\n", "len(cisbp_metadata)" ] }, { "cell_type": "code", "execution_count": 195, "metadata": {}, "outputs": [], "source": [ "motifs_selected = set(cisbp_metadata['Motif_ID'].unique())" ] }, { "cell_type": "code", "execution_count": 198, "metadata": {}, "outputs": [], "source": [ "def cisbp_to_meme(pmws_cisbp_path, motifs_selected, outfile_path, meme_version_number='5.1.1'):\n", "\n", "\n", " \"\"\"\n", " convert cis-BP-formatted position weight matrices text files to a single MEME PWM text file.\n", " \n", " pws_cisbp_path: path of directory where all files are cisbp-formatted PWMS (str)\n", " outfile_path: path of target file (str)\n", " meme_version_number: version number (str)\n", " \"\"\"\n", "\n", " # header of the MEME formatted file\n", " meme_version_line = 'MEME version ' + meme_version_number\n", " alphabet_line = 'ALPHABET= ACGT'\n", " strands_line = 'strands: + -'\n", " background_letter_frequencies_lines = ['Background letter frequencies', 'A 0.25 C 0.25 G 0.25 T 0.25']\n", " lines_head = [meme_version_line, alphabet_line, strands_line]\n", " lines_head.extend(background_letter_frequencies_lines)\n", " with open(outfile_path, 'w') as f:\n", " [f.write(l+'\\n') for l in lines_head]\n", "\n", "\n", "\n", " cisbp_motif_files = [f for f in os.listdir(pmws_cisbp_path) if (os.path.isfile(os.path.join(pwms_cisbp_path, f)) and Path(f).resolve().stem in motifs_selected)]\n", " \n", " cisbp_pwms_stats = pd.DataFrame({'motif_filename':cisbp_motif_files})\n", " cisbp_pwms_max_prob_errors = np.zeros(len(cisbp_motif_files))\n", " \n", " for idx, cisbp_motif_filename in enumerate(cisbp_motif_files):\n", " print(idx, cisbp_motif_filename)\n", " pwm_path = os.path.join(pwms_cisbp_path, cisbp_motif_filename)\n", " pwm_df = pd.read_csv(pwm_path, header=0, sep='\\t')\n", " motif_name = Path(cisbp_motif_filename).resolve().stem\n", " \n", " # sanity checking that columns are always in the same order\n", " assert all(pwm_df.columns == pd.Index(['Pos', 'A', 'C', 'G', 'T'])),\\\n", " 'Motif {}: the letters of the DNA alphabet are not in the correct order [A, C, G, T]'.format(motif_name)\n", " \n", " # sanity checking that rowsums of the PWM sum up to 1 (within tolerance)\n", " prob_error = pwm_df.drop(columns='Pos').apply(axis=1, func=lambda x: abs(sum(x)-1))\n", " cisbp_pwms_max_prob_errors[idx] = max(prob_error)\n", " if not all(np.isclose(prob_error, 0, 1e-3, 1e-3)):\n", " print('Motif {} warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision'.format(motif_name)) \n", " motif_line = 'MOTIF ' + motif_name\n", " letter_probability_line = 'letter-probability matrix:'\n", " lines_before_matrix = [motif_line, letter_probability_line]\n", "\n", " with open(outfile_path, 'a') as f:\n", " [f.write(l+'\\n') for l in lines_before_matrix]\n", "\n", " pwm_df[['A', 'C', 'G', 'T']]\\\n", " .round(6)\\\n", " .applymap('{:.6f}'.format)\\\n", " .to_csv(outfile_path, sep='\\t', index=None, header=None, mode='a')\n", " \n", " cisbp_pwms_stats['max_prob_error'] = cisbp_pwms_max_prob_errors\n", " return cisbp_pwms_stats\n", " " ] }, { "cell_type": "code", "execution_count": 199, "metadata": { "scrolled": true }, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ "0 M04333_2.00.txt\n", "1 M09140_2.00.txt\n", "2 M03027_2.00.txt\n", "3 M03565_2.00.txt\n", "4 M04023_2.00.txt\n", "5 M04500_2.00.txt\n", "6 M07956_2.00.txt\n", "7 M09388_2.00.txt\n", "8 M00348_2.00.txt\n", "9 M03297_2.00.txt\n", "10 M03307_2.00.txt\n", "11 M09635_2.00.txt\n", "Motif M09635_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "12 M07642_2.00.txt\n", "13 M05887_2.00.txt\n", "Motif M05887_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "14 M00244_2.00.txt\n", "15 M02812_2.00.txt\n", "16 M04249_2.00.txt\n", "17 M04794_2.00.txt\n", "18 M00307_2.00.txt\n", "19 M05042_2.00.txt\n", "20 M07631_2.00.txt\n", "21 M08374_2.00.txt\n", "22 M04401_2.00.txt\n", "23 M00341_2.00.txt\n", "24 M04047_2.00.txt\n", "25 M07905_2.00.txt\n", "26 M07885_2.00.txt\n", "27 M08115_2.00.txt\n", "28 M05577_2.00.txt\n", "29 M03370_2.00.txt\n", "30 M00326_2.00.txt\n", "31 M08107_2.00.txt\n", "32 M02892_2.00.txt\n", "33 M08938_2.00.txt\n", "34 M04057_2.00.txt\n", "35 M04449_2.00.txt\n", "36 M01172_2.00.txt\n", "37 M05568_2.00.txt\n", "38 M05428_2.00.txt\n", "39 M04460_2.00.txt\n", "40 M04939_2.00.txt\n", "41 M08053_2.00.txt\n", "42 M05566_2.00.txt\n", "43 M04522_2.00.txt\n", "44 M08260_2.00.txt\n", "45 M08252_2.00.txt\n", "46 M05541_2.00.txt\n", "47 M00218_2.00.txt\n", "48 M05558_2.00.txt\n", "49 M07936_2.00.txt\n", "50 M02883_2.00.txt\n", "51 M00256_2.00.txt\n", "52 M05478_2.00.txt\n", "53 M05037_2.00.txt\n", "54 M05118_2.00.txt\n", "55 M03198_2.00.txt\n", "56 M05590_2.00.txt\n", "57 M09544_2.00.txt\n", "Motif M09544_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "58 M02896_2.00.txt\n", "59 M04477_2.00.txt\n", "60 M05213_2.00.txt\n", "61 M07848_2.00.txt\n", "62 M04911_2.00.txt\n", "63 M05216_2.00.txt\n", "64 M04940_2.00.txt\n", "65 M05811_2.00.txt\n", "66 M00370_2.00.txt\n", "67 M05790_2.00.txt\n", "68 M05189_2.00.txt\n", "69 M08317_2.00.txt\n", "70 M03358_2.00.txt\n", "71 M05475_2.00.txt\n", "72 M04626_2.00.txt\n", "73 M08289_2.00.txt\n", "74 M05645_2.00.txt\n", "75 M07948_2.00.txt\n", "76 M08933_2.00.txt\n", "77 M03525_2.00.txt\n", "78 M04608_2.00.txt\n", "79 M05694_2.00.txt\n", "80 M04855_2.00.txt\n", "81 M04991_2.00.txt\n", "82 M05187_2.00.txt\n", "83 M02809_2.00.txt\n", "84 M03344_2.00.txt\n", "85 M08801_2.00.txt\n", "86 M00290_2.00.txt\n", "87 M04251_2.00.txt\n", "88 M04314_2.00.txt\n", "89 M04497_2.00.txt\n", "90 M00342_2.00.txt\n", "91 M08391_2.00.txt\n", "92 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M09630_2.00.txt\n", "Motif M09630_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "333 M04439_2.00.txt\n", "334 M04084_2.00.txt\n", "335 M05422_2.00.txt\n", "336 M08165_2.00.txt\n", "337 M05174_2.00.txt\n", "338 M05367_2.00.txt\n", "339 M04306_2.00.txt\n", "340 M07836_2.00.txt\n", "341 M08956_2.00.txt\n", "342 M04161_2.00.txt\n", "343 M07752_2.00.txt\n", "344 M04494_2.00.txt\n", "345 M04036_2.00.txt\n", "346 M08048_2.00.txt\n", "347 M08879_2.00.txt\n", "348 M04666_2.00.txt\n", "349 M03453_2.00.txt\n", "350 M05096_2.00.txt\n", "351 M04273_2.00.txt\n", "352 M04312_2.00.txt\n", "353 M08337_2.00.txt\n", "354 M08167_2.00.txt\n", "355 M03527_2.00.txt\n", "356 M04453_2.00.txt\n", "357 M05807_2.00.txt\n", "358 M00225_2.00.txt\n", "359 M02738_2.00.txt\n", "360 M05357_2.00.txt\n", "361 M05049_2.00.txt\n", "362 M03526_2.00.txt\n", "363 M00365_2.00.txt\n", "364 M04919_2.00.txt\n", "365 M05610_2.00.txt\n", "366 M02944_2.00.txt\n", "367 M03230_2.00.txt\n", "368 M05893_2.00.txt\n", "Motif M05893_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "369 M04896_2.00.txt\n", "370 M04819_2.00.txt\n", "371 M04194_2.00.txt\n", "372 M02823_2.00.txt\n", "373 M04128_2.00.txt\n", "374 M05783_2.00.txt\n", "375 M02851_2.00.txt\n", "376 M09292_2.00.txt\n", "377 M05361_2.00.txt\n", "378 M02783_2.00.txt\n", "379 M04201_2.00.txt\n", "380 M07728_2.00.txt\n", "381 M04328_2.00.txt\n", "382 M04850_2.00.txt\n", "383 M07811_2.00.txt\n", "384 M05706_2.00.txt\n", "385 M08892_2.00.txt\n", "386 M05116_2.00.txt\n", "387 M07726_2.00.txt\n", "388 M03127_2.00.txt\n", "389 M05459_2.00.txt\n", "390 M04771_2.00.txt\n", "391 M09344_2.00.txt\n", "392 M09533_2.00.txt\n", "393 M05849_2.00.txt\n", "394 M05650_2.00.txt\n", "395 M07639_2.00.txt\n", "396 M05797_2.00.txt\n", "397 M05364_2.00.txt\n", "398 M05058_2.00.txt\n", "399 M04058_2.00.txt\n", "400 M04595_2.00.txt\n", "401 M08311_2.00.txt\n", "402 M03345_2.00.txt\n", "403 M08335_2.00.txt\n", "404 M04424_2.00.txt\n", "405 M07719_2.00.txt\n", "406 M02728_2.00.txt\n" ] }, { "name": "stdout", "output_type": "stream", "text": [ "407 M02958_2.00.txt\n", "408 M04350_2.00.txt\n", "409 M04263_2.00.txt\n", "410 M05585_2.00.txt\n", "411 M00319_2.00.txt\n", "412 M04060_2.00.txt\n", "413 M02947_2.00.txt\n", "414 M09416_2.00.txt\n", "415 M05627_2.00.txt\n", "416 M04763_2.00.txt\n", "417 M07820_2.00.txt\n", "418 M08876_2.00.txt\n", "419 M05431_2.00.txt\n", "420 M04847_2.00.txt\n", "421 M09378_2.00.txt\n", "422 M05127_2.00.txt\n", "423 M03467_2.00.txt\n", "424 M03883_2.00.txt\n", "425 M04901_2.00.txt\n", "426 M08401_2.00.txt\n", "427 M05113_2.00.txt\n", "428 M05491_2.00.txt\n", "429 M08239_2.00.txt\n", "430 M05848_2.00.txt\n", "Motif M05848_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "431 M05399_2.00.txt\n", "432 M03437_2.00.txt\n", "433 M05095_2.00.txt\n", "434 M04200_2.00.txt\n", "435 M05222_2.00.txt\n", "436 M03048_2.00.txt\n", "437 M09144_2.00.txt\n", "438 M04789_2.00.txt\n", "439 M04756_2.00.txt\n", "440 M03128_2.00.txt\n", "441 M08255_2.00.txt\n", "442 M08319_2.00.txt\n", "443 M05609_2.00.txt\n", "444 M07623_2.00.txt\n", "445 M07894_2.00.txt\n", "446 M05426_2.00.txt\n", "447 M03092_2.00.txt\n", "448 M02928_2.00.txt\n", "449 M07944_2.00.txt\n", "450 M03355_2.00.txt\n", "451 M04532_2.00.txt\n", "452 M05883_2.00.txt\n", "Motif M05883_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "453 M08738_2.00.txt\n", "454 M08389_2.00.txt\n", "455 M04455_2.00.txt\n", "456 M08376_2.00.txt\n", "457 M08221_2.00.txt\n", "458 M07975_2.00.txt\n", "459 M00838_2.00.txt\n", "460 M04609_2.00.txt\n", "461 M07841_2.00.txt\n", "462 M08235_2.00.txt\n", "463 M08212_2.00.txt\n", "464 M05100_2.00.txt\n", "465 M04065_2.00.txt\n", "466 M07866_2.00.txt\n", "467 M05755_2.00.txt\n", "468 M05128_2.00.txt\n", "469 M04335_2.00.txt\n", "470 M04749_2.00.txt\n", "471 M05735_2.00.txt\n", "472 M03448_2.00.txt\n", "473 M08223_2.00.txt\n", "474 M09095_2.00.txt\n", "475 M02849_2.00.txt\n", "476 M05737_2.00.txt\n", "477 M03150_2.00.txt\n", "478 M08381_2.00.txt\n", "479 M03101_2.00.txt\n", "480 M03510_2.00.txt\n", "481 M02919_2.00.txt\n", "482 M07732_2.00.txt\n", "483 M03131_2.00.txt\n", "484 M02807_2.00.txt\n", "485 M07663_2.00.txt\n", "486 M03186_2.00.txt\n", "487 M02980_2.00.txt\n", "488 M08131_2.00.txt\n", "489 M04852_2.00.txt\n", "490 M03202_2.00.txt\n", "491 M05550_2.00.txt\n", "492 M09283_2.00.txt\n", "493 M02872_2.00.txt\n", "494 M03490_2.00.txt\n", "495 M02994_2.00.txt\n", "496 M05154_2.00.txt\n", "497 M04729_2.00.txt\n", "498 M05069_2.00.txt\n", "499 M09370_2.00.txt\n", "500 M08877_2.00.txt\n", "501 M04352_2.00.txt\n", "502 M00303_2.00.txt\n", "503 M04906_2.00.txt\n", "504 M02749_2.00.txt\n", "505 M03450_2.00.txt\n", "506 M07772_2.00.txt\n", "507 M04207_2.00.txt\n", "508 M05068_2.00.txt\n", "509 M09439_2.00.txt\n", "510 M08904_2.00.txt\n", "511 M03386_2.00.txt\n", "512 M00270_2.00.txt\n", "513 M03075_2.00.txt\n", "514 M07744_2.00.txt\n", "515 M09218_2.00.txt\n", "516 M07725_2.00.txt\n", "517 M03484_2.00.txt\n", "518 M03338_2.00.txt\n", "519 M04146_2.00.txt\n", "520 M03486_2.00.txt\n", "521 M07747_2.00.txt\n", "522 M09092_2.00.txt\n", "523 M05416_2.00.txt\n", "524 M03483_2.00.txt\n", "525 M05404_2.00.txt\n", "526 M09035_2.00.txt\n", "527 M04637_2.00.txt\n", "528 M05692_2.00.txt\n", "529 M02971_2.00.txt\n", "530 M02939_2.00.txt\n", "531 M05729_2.00.txt\n", "532 M03390_2.00.txt\n", "533 M03381_2.00.txt\n", "534 M08888_2.00.txt\n", "535 M03374_2.00.txt\n", "536 M04276_2.00.txt\n", "537 M05143_2.00.txt\n", "538 M05115_2.00.txt\n", "539 M02916_2.00.txt\n", "540 M00226_2.00.txt\n", "541 M04540_2.00.txt\n", "542 M04489_2.00.txt\n", "543 M04410_2.00.txt\n", "544 M08052_2.00.txt\n", "545 M00272_2.00.txt\n", "546 M04294_2.00.txt\n", "547 M08251_2.00.txt\n", "548 M03444_2.00.txt\n", "549 M07659_2.00.txt\n", "550 M07622_2.00.txt\n", "551 M08313_2.00.txt\n", "552 M03040_2.00.txt\n", "553 M09154_2.00.txt\n", "554 M05159_2.00.txt\n", "555 M05536_2.00.txt\n", "556 M00336_2.00.txt\n", "557 M08950_2.00.txt\n", "558 M04515_2.00.txt\n", "559 M03455_2.00.txt\n", "560 M08954_2.00.txt\n", "561 M04062_2.00.txt\n", "562 M04652_2.00.txt\n", "563 M05623_2.00.txt\n", "564 M05062_2.00.txt\n", "565 M05132_2.00.txt\n", "566 M03329_2.00.txt\n", "567 M03112_2.00.txt\n", "568 M05485_2.00.txt\n", "569 M00292_2.00.txt\n", "570 M04598_2.00.txt\n", "571 M03321_2.00.txt\n", "572 M04234_2.00.txt\n", "573 M05845_2.00.txt\n", "Motif M05845_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "574 M04274_2.00.txt\n", "575 M02084_2.00.txt\n", "576 M08090_2.00.txt\n", "577 M03296_2.00.txt\n", "578 M08332_2.00.txt\n", "579 M03401_2.00.txt\n", "580 M05691_2.00.txt\n", "581 M05182_2.00.txt\n", "582 M03301_2.00.txt\n", "583 M08020_2.00.txt\n", "584 M04098_2.00.txt\n", "585 M08794_2.00.txt\n", "586 M09233_2.00.txt\n", "587 M08257_2.00.txt\n", "588 M05869_2.00.txt\n", "Motif M05869_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "589 M05082_2.00.txt\n", "590 M05876_2.00.txt\n", "Motif M05876_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "591 M05328_2.00.txt\n", "592 M04827_2.00.txt\n", "593 M05311_2.00.txt\n", "594 M04184_2.00.txt\n", "595 M04571_2.00.txt\n", "596 M04973_2.00.txt\n", "597 M03044_2.00.txt\n", "598 M05504_2.00.txt\n", "599 M03562_2.00.txt\n", "600 M04718_2.00.txt\n", "601 M05352_2.00.txt\n", "602 M05197_2.00.txt\n", "603 M07932_2.00.txt\n", "604 M03146_2.00.txt\n", "605 M04663_2.00.txt\n", "606 M05677_2.00.txt\n", "607 M07577_2.00.txt\n", "608 M04936_2.00.txt\n", "609 M05750_2.00.txt\n", "610 M04634_2.00.txt\n", "611 M02850_2.00.txt\n", "612 M02957_2.00.txt\n", "613 M04425_2.00.txt\n", "614 M05772_2.00.txt\n", "615 M09296_2.00.txt\n", "616 M03313_2.00.txt\n", "617 M08309_2.00.txt\n", "618 M04157_2.00.txt\n", "619 M09346_2.00.txt\n", "620 M05040_2.00.txt\n", "621 M03579_2.00.txt\n", "622 M00741_2.00.txt\n", "623 M04893_2.00.txt\n", "624 M04227_2.00.txt\n", "625 M00295_2.00.txt\n", "626 M03377_2.00.txt\n", "627 M04843_2.00.txt\n", "628 M04857_2.00.txt\n", "629 M03167_2.00.txt\n", "630 M08290_2.00.txt\n", "631 M08116_2.00.txt\n", "632 M05161_2.00.txt\n", "633 M00327_2.00.txt\n", "634 M05003_2.00.txt\n", "635 M04869_2.00.txt\n", "636 M02089_2.00.txt\n", "637 M00742_2.00.txt\n", "638 M04809_2.00.txt\n", "639 M03004_2.00.txt\n", "640 M03203_2.00.txt\n", "641 M03153_2.00.txt\n", "642 M05713_2.00.txt\n", "643 M02090_2.00.txt\n", "644 M05464_2.00.txt\n", "645 M04440_2.00.txt\n", "646 M03522_2.00.txt\n", "647 M05083_2.00.txt\n", "648 M07624_2.00.txt\n", "649 M08095_2.00.txt\n", "650 M08011_2.00.txt\n", "651 M07668_2.00.txt\n", "652 M03411_2.00.txt\n", "653 M07618_2.00.txt\n", "654 M03568_2.00.txt\n", "655 M08232_2.00.txt\n", "656 M02876_2.00.txt\n", "657 M04356_2.00.txt\n", "658 M07876_2.00.txt\n", "659 M01272_2.00.txt\n", "660 M04529_2.00.txt\n", "661 M04093_2.00.txt\n", "662 M03188_2.00.txt\n", "663 M03491_2.00.txt\n", "664 M05854_2.00.txt\n", "665 M04853_2.00.txt\n", "666 M07735_2.00.txt\n", "667 M08303_2.00.txt\n", "668 M04373_2.00.txt\n", "669 M04072_2.00.txt\n", "670 M04705_2.00.txt\n", "671 M04014_2.00.txt\n", "672 M02998_2.00.txt\n", "673 M04975_2.00.txt\n", "674 M03064_2.00.txt\n", "675 M04788_2.00.txt\n", "676 M04379_2.00.txt\n", "677 M05275_2.00.txt\n", "678 M05507_2.00.txt\n", "679 M08714_2.00.txt\n", "680 M07665_2.00.txt\n", "681 M07570_2.00.txt\n", "682 M07648_2.00.txt\n", "683 M04104_2.00.txt\n", "684 M05272_2.00.txt\n", "685 M08305_2.00.txt\n", "686 M04805_2.00.txt\n", "687 M04992_2.00.txt\n", "688 M07870_2.00.txt\n", "689 M05655_2.00.txt\n", "690 M07675_2.00.txt\n", "691 M04793_2.00.txt\n", "692 M04291_2.00.txt\n", "693 M07947_2.00.txt\n", "694 M04824_2.00.txt\n", "695 M04066_2.00.txt\n", "696 M05331_2.00.txt\n", "697 M08058_2.00.txt\n", "698 M05025_2.00.txt\n", "699 M05839_2.00.txt\n", "Motif M05839_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "700 M04454_2.00.txt\n", "701 M04516_2.00.txt\n", "702 M05572_2.00.txt\n", "703 M05294_2.00.txt\n", "704 M05725_2.00.txt\n", "705 M08286_2.00.txt\n", "706 M08390_2.00.txt\n", "707 M04099_2.00.txt\n", "708 M09377_2.00.txt\n", "709 M05538_2.00.txt\n", "710 M05315_2.00.txt\n", "711 M05712_2.00.txt\n", "712 M05596_2.00.txt\n", "713 M02912_2.00.txt\n", "714 M04517_2.00.txt\n", "715 M05716_2.00.txt\n", "716 M09288_2.00.txt\n", "717 M08086_2.00.txt\n", "718 M05881_2.00.txt\n", "Motif M05881_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "719 M04672_2.00.txt\n", "720 M08287_2.00.txt\n", "721 M03347_2.00.txt\n", "722 M04398_2.00.txt\n", "723 M07833_2.00.txt\n", "724 M04320_2.00.txt\n", "725 M03470_2.00.txt\n", "726 M03457_2.00.txt\n", "727 M04733_2.00.txt\n", "728 M08797_2.00.txt\n", "729 M09091_2.00.txt\n", "730 M04620_2.00.txt\n", "731 M04838_2.00.txt\n", "732 M05602_2.00.txt\n", "733 M05649_2.00.txt\n", "734 M04327_2.00.txt\n", "735 M04458_2.00.txt\n", "736 M02859_2.00.txt\n", "737 M04268_2.00.txt\n", "738 M05258_2.00.txt\n", "739 M05664_2.00.txt\n", "740 M05701_2.00.txt\n", "741 M04658_2.00.txt\n", "742 M02920_2.00.txt\n", "743 M09089_2.00.txt\n", "744 M04553_2.00.txt\n", "745 M08719_2.00.txt\n", "746 M09426_2.00.txt\n", "747 M08322_2.00.txt\n", "748 M09276_2.00.txt\n", "749 M05164_2.00.txt\n", "750 M04601_2.00.txt\n", "751 M08790_2.00.txt\n", "752 M04253_2.00.txt\n", "753 M05569_2.00.txt\n", "754 M05878_2.00.txt\n", "Motif M05878_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "755 M00281_2.00.txt\n", "756 M03214_2.00.txt\n", "757 M07999_2.00.txt\n", "758 M00301_2.00.txt\n", "759 M01501_2.00.txt\n", "760 M00366_2.00.txt\n", "761 M05139_2.00.txt\n", "762 M07654_2.00.txt\n", "763 M08327_2.00.txt\n", "764 M07937_2.00.txt\n", "765 M05857_2.00.txt\n", "766 M03293_2.00.txt\n", "767 M02889_2.00.txt\n", "768 M00297_2.00.txt\n", "769 M04744_2.00.txt\n", "770 M05517_2.00.txt\n", "771 M09607_2.00.txt\n", "Motif M09607_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "772 M04315_2.00.txt\n", "773 M03451_2.00.txt\n", "774 M02778_2.00.txt\n", "775 M09609_2.00.txt\n", "Motif M09609_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "776 M09396_2.00.txt\n" ] }, { "name": "stdout", "output_type": "stream", "text": [ "777 M05660_2.00.txt\n", "778 M05758_2.00.txt\n", "779 M05809_2.00.txt\n", "780 M07770_2.00.txt\n", "781 M04684_2.00.txt\n", "782 M09248_2.00.txt\n", "783 M03552_2.00.txt\n", "784 M08192_2.00.txt\n", "785 M04216_2.00.txt\n", "786 M02680_2.00.txt\n", "787 M03372_2.00.txt\n", "788 M09345_2.00.txt\n", "789 M03517_2.00.txt\n", "790 M08256_2.00.txt\n", "791 M05671_2.00.txt\n", "792 M04600_2.00.txt\n", "793 M09335_2.00.txt\n", "794 M04107_2.00.txt\n", "795 M05099_2.00.txt\n", "796 M05866_2.00.txt\n", "Motif M05866_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "797 M03077_2.00.txt\n", "798 M02717_2.00.txt\n", "799 M08370_2.00.txt\n", "800 M07939_2.00.txt\n", "801 M00333_2.00.txt\n", "802 M07760_2.00.txt\n", "803 M02748_2.00.txt\n", "804 M04823_2.00.txt\n", "805 M04714_2.00.txt\n", "806 M08184_2.00.txt\n", "807 M05672_2.00.txt\n", "808 M03031_2.00.txt\n", "809 M05819_2.00.txt\n", "810 M09595_2.00.txt\n", "Motif M09595_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "811 M04243_2.00.txt\n", "812 M04821_2.00.txt\n", "813 M08340_2.00.txt\n", "814 M05447_2.00.txt\n", "815 M08068_2.00.txt\n", "816 M08220_2.00.txt\n", "817 M08331_2.00.txt\n", "818 M05836_2.00.txt\n", "Motif M05836_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "819 M03093_2.00.txt\n", "820 M03331_2.00.txt\n", "821 M08720_2.00.txt\n", "822 M05144_2.00.txt\n", "823 M05434_2.00.txt\n", "824 M04882_2.00.txt\n", "825 M02658_2.00.txt\n", "826 M03465_2.00.txt\n", "827 M03518_2.00.txt\n", "828 M03335_2.00.txt\n", "829 M04543_2.00.txt\n", "830 M09391_2.00.txt\n", "831 M04496_2.00.txt\n", "832 M04654_2.00.txt\n", "833 M09523_2.00.txt\n", "834 M00358_2.00.txt\n", "835 M05571_2.00.txt\n", "836 M05661_2.00.txt\n", "837 M04492_2.00.txt\n", "838 M05430_2.00.txt\n", "839 M04237_2.00.txt\n", "840 M04640_2.00.txt\n", "841 M00984_2.00.txt\n", "842 M08781_2.00.txt\n", "843 M02449_2.00.txt\n", "844 M09504_2.00.txt\n", "Motif M09504_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "845 M04509_2.00.txt\n", "846 M08735_2.00.txt\n", "847 M04527_2.00.txt\n", "848 M05892_2.00.txt\n", "Motif M05892_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "849 M04396_2.00.txt\n", "850 M04645_2.00.txt\n", "851 M04582_2.00.txt\n", "852 M05687_2.00.txt\n", "853 M04111_2.00.txt\n", "854 M04697_2.00.txt\n", "855 M07565_2.00.txt\n", "856 M03218_2.00.txt\n", "857 M07764_2.00.txt\n", "858 M00287_2.00.txt\n", "859 M07795_2.00.txt\n", "860 M09083_2.00.txt\n", "861 M00242_2.00.txt\n", "862 M05183_2.00.txt\n", "863 M05055_2.00.txt\n", "864 M02093_2.00.txt\n", "865 M07969_2.00.txt\n", "866 M05757_2.00.txt\n", "867 M02792_2.00.txt\n", "868 M08917_2.00.txt\n", "869 M09294_2.00.txt\n", "870 M07934_2.00.txt\n", "871 M03187_2.00.txt\n", "872 M08320_2.00.txt\n", "873 M03547_2.00.txt\n", "874 M05515_2.00.txt\n", "875 M07653_2.00.txt\n", "876 M09270_2.00.txt\n", "877 M07585_2.00.txt\n", "878 M03414_2.00.txt\n", "879 M05598_2.00.txt\n", "880 M04854_2.00.txt\n", "881 M05023_2.00.txt\n", "882 M05356_2.00.txt\n", "883 M04423_2.00.txt\n", "884 M04178_2.00.txt\n", "885 M04706_2.00.txt\n", "886 M03072_2.00.txt\n", "887 M05479_2.00.txt\n", "888 M04812_2.00.txt\n", "889 M04173_2.00.txt\n", "890 M00938_2.00.txt\n", "891 M00324_2.00.txt\n", "892 M02824_2.00.txt\n", "893 M05683_2.00.txt\n", "894 M07812_2.00.txt\n", "895 M04985_2.00.txt\n", "896 M03138_2.00.txt\n", "897 M04116_2.00.txt\n", "898 M03507_2.00.txt\n", "899 M05398_2.00.txt\n", "900 M04803_2.00.txt\n", "901 M03316_2.00.txt\n", "902 M02735_2.00.txt\n", "903 M00222_2.00.txt\n", "904 M09503_2.00.txt\n", "Motif M09503_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "905 M04257_2.00.txt\n", "906 M01506_2.00.txt\n", "907 M02088_2.00.txt\n", "908 M03119_2.00.txt\n", "909 M03506_2.00.txt\n", "910 M09286_2.00.txt\n", "911 M08382_2.00.txt\n", "912 M04703_2.00.txt\n", "913 M04815_2.00.txt\n", "914 M05012_2.00.txt\n", "915 M09162_2.00.txt\n", "916 M05323_2.00.txt\n", "917 M03105_2.00.txt\n", "918 M03122_2.00.txt\n", "919 M08894_2.00.txt\n", "920 M09020_2.00.txt\n", "921 M03129_2.00.txt\n", "922 M04709_2.00.txt\n", "923 M04820_2.00.txt\n", "924 M04338_2.00.txt\n", "925 M05445_2.00.txt\n", "926 M09457_2.00.txt\n", "927 M00234_2.00.txt\n", "928 M05084_2.00.txt\n", "929 M08869_2.00.txt\n", "930 M07965_2.00.txt\n", "931 M00368_2.00.txt\n", "932 M05021_2.00.txt\n", "933 M04448_2.00.txt\n", "934 M04245_2.00.txt\n", "935 M03332_2.00.txt\n", "936 M03489_2.00.txt\n", "937 M00363_2.00.txt\n", "938 M08726_2.00.txt\n", "939 M03558_2.00.txt\n", "940 M09622_2.00.txt\n", "Motif M09622_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "941 M04840_2.00.txt\n", "942 M03363_2.00.txt\n", "943 M03572_2.00.txt\n", "944 M08733_2.00.txt\n", "945 M05579_2.00.txt\n", "946 M09164_2.00.txt\n", "947 M00340_2.00.txt\n", "948 M04651_2.00.txt\n", "949 M03216_2.00.txt\n", "950 M09052_2.00.txt\n", "951 M04019_2.00.txt\n", "952 M05043_2.00.txt\n", "953 M08316_2.00.txt\n", "954 M02813_2.00.txt\n", "955 M01500_2.00.txt\n", "956 M07962_2.00.txt\n", "957 M04602_2.00.txt\n", "958 M05529_2.00.txt\n", "959 M05077_2.00.txt\n", "960 M02848_2.00.txt\n", "961 M05730_2.00.txt\n", "962 M04063_2.00.txt\n", "963 M04746_2.00.txt\n", "964 M09291_2.00.txt\n", "965 M04848_2.00.txt\n", "966 M04141_2.00.txt\n", "967 M08721_2.00.txt\n", "968 M04132_2.00.txt\n", "969 M01961_2.00.txt\n", "970 M07859_2.00.txt\n", "971 M07778_2.00.txt\n", "972 M08130_2.00.txt\n", "973 M09395_2.00.txt\n", "974 M04933_2.00.txt\n", "975 M07881_2.00.txt\n", "976 M04226_2.00.txt\n", "977 M09285_2.00.txt\n", "978 M04957_2.00.txt\n", "979 M04928_2.00.txt\n", "980 M05103_2.00.txt\n", "981 M08268_2.00.txt\n", "982 M02806_2.00.txt\n", "983 M04064_2.00.txt\n", "984 M04366_2.00.txt\n", "985 M04755_2.00.txt\n", "986 M05890_2.00.txt\n", "Motif M05890_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "987 M05134_2.00.txt\n", "988 M03078_2.00.txt\n", "989 M08188_2.00.txt\n", "990 M05283_2.00.txt\n", "991 M09149_2.00.txt\n", "992 M07573_2.00.txt\n", "993 M02716_2.00.txt\n", "994 M04359_2.00.txt\n", "995 M04796_2.00.txt\n", "996 M04559_2.00.txt\n", "997 M05332_2.00.txt\n", "998 M07896_2.00.txt\n", "999 M08229_2.00.txt\n", "1000 M05224_2.00.txt\n", "1001 M04518_2.00.txt\n", "1002 M04248_2.00.txt\n", "1003 M04258_2.00.txt\n", "1004 M04916_2.00.txt\n", "1005 M08356_2.00.txt\n", "1006 M04150_2.00.txt\n", "1007 M04780_2.00.txt\n", "1008 M04673_2.00.txt\n", "1009 M09046_2.00.txt\n", "1010 M04871_2.00.txt\n", "1011 M04930_2.00.txt\n", "1012 M04134_2.00.txt\n", "1013 M05837_2.00.txt\n", "Motif M05837_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1014 M04859_2.00.txt\n", "1015 M07763_2.00.txt\n", "1016 M04142_2.00.txt\n", "1017 M07617_2.00.txt\n", "1018 M05494_2.00.txt\n", "1019 M03145_2.00.txt\n", "1020 M04829_2.00.txt\n", "1021 M04034_2.00.txt\n", "1022 M02905_2.00.txt\n", "1023 M09054_2.00.txt\n", "1024 M05371_2.00.txt\n", "1025 M02829_2.00.txt\n", "1026 M05192_2.00.txt\n", "1027 M09129_2.00.txt\n", "1028 M05680_2.00.txt\n", "1029 M05601_2.00.txt\n", "1030 M05304_2.00.txt\n", "1031 M04918_2.00.txt\n", "1032 M03185_2.00.txt\n", "1033 M04917_2.00.txt\n", "1034 M07645_2.00.txt\n", "1035 M05006_2.00.txt\n", "1036 M08384_2.00.txt\n", "1037 M04984_2.00.txt\n", "1038 M05226_2.00.txt\n", "1039 M08806_2.00.txt\n", "1040 M09119_2.00.txt\n", "1041 M08906_2.00.txt\n", "1042 M00264_2.00.txt\n", "1043 M05738_2.00.txt\n", "1044 M04836_2.00.txt\n", "1045 M05818_2.00.txt\n", "1046 M05377_2.00.txt\n", "1047 M08799_2.00.txt\n", "1048 M08946_2.00.txt\n", "1049 M04924_2.00.txt\n", "1050 M03500_2.00.txt\n", "1051 M03330_2.00.txt\n", "1052 M05855_2.00.txt\n", "1053 M08918_2.00.txt\n", "1054 M04446_2.00.txt\n", "1055 M04073_2.00.txt\n", "1056 M08927_2.00.txt\n", "1057 M04324_2.00.txt\n", "1058 M04995_2.00.txt\n", "1059 M04623_2.00.txt\n", "1060 M09118_2.00.txt\n", "1061 M02960_2.00.txt\n", "1062 M09549_2.00.txt\n", "Motif M09549_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1063 M06465_2.00.txt\n", "1064 M09532_2.00.txt\n", "Motif M09532_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1065 M08172_2.00.txt\n", "1066 M09585_2.00.txt\n", "Motif M09585_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1067 M08273_2.00.txt\n", "1068 M07730_2.00.txt\n", "1069 M08244_2.00.txt\n", "1070 M04136_2.00.txt\n", "1071 M07729_2.00.txt\n", "1072 M05296_2.00.txt\n", "1073 M05351_2.00.txt\n", "1074 M03178_2.00.txt\n", "1075 M01304_2.00.txt\n", "1076 M03314_2.00.txt\n", "1077 M04586_2.00.txt\n", "1078 M04262_2.00.txt\n", "1079 M07899_2.00.txt\n", "1080 M09462_2.00.txt\n", "Motif M09462_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1081 M05480_2.00.txt\n", "1082 M01210_2.00.txt\n", "1083 M03570_2.00.txt\n", "1084 M04247_2.00.txt\n", "1085 M03117_2.00.txt\n", "1086 M05053_2.00.txt\n", "1087 M02730_2.00.txt\n", "1088 M05273_2.00.txt\n", "1089 M04357_2.00.txt\n", "1090 M08203_2.00.txt\n", "1091 M05212_2.00.txt\n", "1092 M04074_2.00.txt\n", "1093 M07883_2.00.txt\n", "1094 M04160_2.00.txt\n", "1095 M04163_2.00.txt\n", "1096 M09603_2.00.txt\n", "1097 M04754_2.00.txt\n", "1098 M04818_2.00.txt\n", "1099 M04244_2.00.txt\n", "1100 M08342_2.00.txt\n", "1101 M04981_2.00.txt\n", "1102 M05277_2.00.txt\n", "1103 M07966_2.00.txt\n", "1104 M03033_2.00.txt\n", "1105 M07887_2.00.txt\n", "1106 M03531_2.00.txt\n", "1107 M05752_2.00.txt\n", "1108 M07858_2.00.txt\n", "1109 M03242_2.00.txt\n", "1110 M09275_2.00.txt\n", "1111 M03109_2.00.txt\n", "1112 M09135_2.00.txt\n", "1113 M03292_2.00.txt\n", "1114 M03120_2.00.txt\n", "1115 M00343_2.00.txt\n", "1116 M07781_2.00.txt\n", "1117 M08461_2.00.txt\n", "1118 M08868_2.00.txt\n", "1119 M02802_2.00.txt\n", "1120 M05427_2.00.txt\n", "1121 M04362_2.00.txt\n", "1122 M04378_2.00.txt\n", "1123 M03063_2.00.txt\n", "1124 M04961_2.00.txt\n", "1125 M07834_2.00.txt\n", "1126 M03156_2.00.txt\n", "1127 M08785_2.00.txt\n", "1128 M00289_2.00.txt\n", "1129 M08857_2.00.txt\n", "1130 M08292_2.00.txt\n", "1131 M00315_2.00.txt\n", "1132 M05586_2.00.txt\n", "1133 M08372_2.00.txt\n", "1134 M07895_2.00.txt\n", "1135 M04345_2.00.txt\n", "1136 M08338_2.00.txt\n", "1137 M00263_2.00.txt\n", "1138 M07897_2.00.txt\n", "1139 M09273_2.00.txt\n", "1140 M08264_2.00.txt\n", "1141 M03200_2.00.txt\n", "1142 M08294_2.00.txt\n", "1143 M04075_2.00.txt\n", "1144 M09236_2.00.txt\n", "1145 M08112_2.00.txt\n", "1146 M09269_2.00.txt\n", "1147 M05642_2.00.txt\n", "1148 M05369_2.00.txt\n", "1149 M04418_2.00.txt\n", "1150 M05574_2.00.txt\n", "1151 M04088_2.00.txt\n" ] }, { "name": "stdout", "output_type": "stream", "text": [ "1152 M04038_2.00.txt\n", "1153 M07745_2.00.txt\n", "1154 M07822_2.00.txt\n", "1155 M07567_2.00.txt\n", "1156 M04165_2.00.txt\n", "1157 M07873_2.00.txt\n", "1158 M07718_2.00.txt\n", "1159 M05007_2.00.txt\n", "1160 M07911_2.00.txt\n", "1161 M02962_2.00.txt\n", "1162 M05440_2.00.txt\n", "1163 M04293_2.00.txt\n", "1164 M02891_2.00.txt\n", "1165 M04394_2.00.txt\n", "1166 M00258_2.00.txt\n", "1167 M02940_2.00.txt\n", "1168 M08069_2.00.txt\n", "1169 M02879_2.00.txt\n", "1170 M08809_2.00.txt\n", "1171 M05031_2.00.txt\n", "1172 M09502_2.00.txt\n", "1173 M08913_2.00.txt\n", "1174 M08948_2.00.txt\n", "1175 M08222_2.00.txt\n", "1176 M05302_2.00.txt\n", "1177 M07776_2.00.txt\n", "1178 M02973_2.00.txt\n", "1179 M04980_2.00.txt\n", "1180 M05309_2.00.txt\n", "1181 M08050_2.00.txt\n", "1182 M05765_2.00.txt\n", "1183 M03221_2.00.txt\n", "1184 M04197_2.00.txt\n", "1185 M02906_2.00.txt\n", "1186 M04135_2.00.txt\n", "1187 M03194_2.00.txt\n", "1188 M05829_2.00.txt\n", "1189 M04704_2.00.txt\n", "1190 M05013_2.00.txt\n", "1191 M05071_2.00.txt\n", "1192 M04040_2.00.txt\n", "1193 M00260_2.00.txt\n", "1194 M00351_2.00.txt\n", "1195 M04523_2.00.txt\n", "1196 M07987_2.00.txt\n", "1197 M04225_2.00.txt\n", "1198 M02739_2.00.txt\n", "1199 M08135_2.00.txt\n", "1200 M03235_2.00.txt\n", "1201 M04392_2.00.txt\n", "1202 M09087_2.00.txt\n", "1203 M05233_2.00.txt\n", "1204 M04862_2.00.txt\n", "1205 M07562_2.00.txt\n", "1206 M03246_2.00.txt\n", "1207 M01246_2.00.txt\n", "1208 M05496_2.00.txt\n", "1209 M04081_2.00.txt\n", "1210 M03495_2.00.txt\n", "1211 M09596_2.00.txt\n", "Motif M09596_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1212 M02926_2.00.txt\n", "1213 M03362_2.00.txt\n", "1214 M07984_2.00.txt\n", "1215 M05814_2.00.txt\n", "1216 M04259_2.00.txt\n", "1217 M05191_2.00.txt\n", "1218 M04191_2.00.txt\n", "1219 M04715_2.00.txt\n", "1220 M04059_2.00.txt\n", "1221 M03065_2.00.txt\n", "1222 M05644_2.00.txt\n", "1223 M05374_2.00.txt\n", "1224 M05140_2.00.txt\n", "1225 M02951_2.00.txt\n", "1226 M09264_2.00.txt\n", "1227 M03208_2.00.txt\n", "1228 M08270_2.00.txt\n", "1229 M04240_2.00.txt\n", "1230 M05307_2.00.txt\n", "1231 M05856_2.00.txt\n", "Motif M05856_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1232 M04206_2.00.txt\n", "1233 M03085_2.00.txt\n", "1234 M05126_2.00.txt\n", "1235 M08089_2.00.txt\n", "1236 M07824_2.00.txt\n", "1237 M04441_2.00.txt\n", "1238 M04935_2.00.txt\n", "1239 M08057_2.00.txt\n", "1240 M05257_2.00.txt\n", "1241 M09047_2.00.txt\n", "1242 M04445_2.00.txt\n", "1243 M04534_2.00.txt\n", "1244 M05262_2.00.txt\n", "1245 M05486_2.00.txt\n", "1246 M09394_2.00.txt\n", "1247 M05147_2.00.txt\n", "1248 M05152_2.00.txt\n", "1249 M04159_2.00.txt\n", "1250 M08363_2.00.txt\n", "1251 M09146_2.00.txt\n", "1252 M07797_2.00.txt\n", "1253 M08701_2.00.txt\n", "1254 M04551_2.00.txt\n", "1255 M04830_2.00.txt\n", "1256 M02968_2.00.txt\n", "1257 M08015_2.00.txt\n", "1258 M05695_2.00.txt\n", "1259 M09397_2.00.txt\n", "1260 M02882_2.00.txt\n", "1261 M05578_2.00.txt\n", "1262 M04202_2.00.txt\n", "1263 M04179_2.00.txt\n", "1264 M08731_2.00.txt\n", "1265 M07716_2.00.txt\n", "1266 M04297_2.00.txt\n", "1267 M05663_2.00.txt\n", "1268 M07854_2.00.txt\n", "1269 M04450_2.00.txt\n", "1270 M03113_2.00.txt\n", "1271 M02877_2.00.txt\n", "1272 M08076_2.00.txt\n", "1273 M04636_2.00.txt\n", "1274 M04760_2.00.txt\n", "1275 M07550_2.00.txt\n", "1276 M02763_2.00.txt\n", "1277 M00334_2.00.txt\n", "1278 M03308_2.00.txt\n", "1279 M07977_2.00.txt\n", "1280 M05436_2.00.txt\n", "1281 M04100_2.00.txt\n", "1282 M04217_2.00.txt\n", "1283 M07643_2.00.txt\n", "1284 M05466_2.00.txt\n", "1285 M07907_2.00.txt\n", "1286 M05228_2.00.txt\n", "1287 M04260_2.00.txt\n", "1288 M05123_2.00.txt\n", "1289 M07686_2.00.txt\n", "1290 M05129_2.00.txt\n", "1291 M08304_2.00.txt\n", "1292 M00362_2.00.txt\n", "1293 M05549_2.00.txt\n", "1294 M04464_2.00.txt\n", "1295 M07657_2.00.txt\n", "1296 M07801_2.00.txt\n", "1297 M09115_2.00.txt\n", "1298 M05343_2.00.txt\n", "1299 M04488_2.00.txt\n", "1300 M05198_2.00.txt\n", "1301 M05395_2.00.txt\n", "1302 M03227_2.00.txt\n", "1303 M03443_2.00.txt\n", "1304 M04127_2.00.txt\n", "1305 M07869_2.00.txt\n", "1306 M04467_2.00.txt\n", "1307 M03553_2.00.txt\n", "1308 M05618_2.00.txt\n", "1309 M04685_2.00.txt\n", "1310 M04646_2.00.txt\n", "1311 M07926_2.00.txt\n", "1312 M04325_2.00.txt\n", "1313 M05771_2.00.txt\n", "1314 M02839_2.00.txt\n", "1315 M02873_2.00.txt\n", "1316 M03404_2.00.txt\n", "1317 M03234_2.00.txt\n", "1318 M08935_2.00.txt\n", "1319 M03173_2.00.txt\n", "1320 M07835_2.00.txt\n", "1321 M00265_2.00.txt\n", "1322 M04125_2.00.txt\n", "1323 M00288_2.00.txt\n", "1324 M07847_2.00.txt\n", "1325 M02751_2.00.txt\n", "1326 M05316_2.00.txt\n", "1327 M02902_2.00.txt\n", "1328 M09347_2.00.txt\n", "1329 M09655_2.00.txt\n", "Motif M09655_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1330 M03454_2.00.txt\n", "1331 M04618_2.00.txt\n", "1332 M04055_2.00.txt\n", "1333 M04210_2.00.txt\n", "1334 M04498_2.00.txt\n", "1335 M04603_2.00.txt\n", "1336 M05721_2.00.txt\n", "1337 M05489_2.00.txt\n", "1338 M08789_2.00.txt\n", "1339 M08901_2.00.txt\n", "1340 M03125_2.00.txt\n", "1341 M09453_2.00.txt\n", "Motif M09453_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1342 M04295_2.00.txt\n", "1343 M07880_2.00.txt\n", "1344 M07630_2.00.txt\n", "1345 M02781_2.00.txt\n", "1346 M00837_2.00.txt\n", "1347 M00302_2.00.txt\n", "1348 M05348_2.00.txt\n", "1349 M04546_2.00.txt\n", "1350 M04592_2.00.txt\n", "1351 M07704_2.00.txt\n", "1352 M05215_2.00.txt\n", "1353 M04482_2.00.txt\n", "1354 M05643_2.00.txt\n", "1355 M02942_2.00.txt\n", "1356 M05581_2.00.txt\n", "1357 M00332_2.00.txt\n", "1358 M04123_2.00.txt\n", "1359 M04722_2.00.txt\n", "1360 M02976_2.00.txt\n", "1361 M07759_2.00.txt\n", "1362 M04808_2.00.txt\n", "1363 M04589_2.00.txt\n", "1364 M04223_2.00.txt\n", "1365 M08368_2.00.txt\n", "1366 M04341_2.00.txt\n", "1367 M05220_2.00.txt\n", "1368 M09509_2.00.txt\n", "1369 M05522_2.00.txt\n", "1370 M08734_2.00.txt\n", "1371 M04670_2.00.txt\n", "1372 M07850_2.00.txt\n", "1373 M03022_2.00.txt\n", "1374 M00219_2.00.txt\n", "1375 M04813_2.00.txt\n", "1376 M04914_2.00.txt\n", "1377 M05195_2.00.txt\n", "1378 M04386_2.00.txt\n", "1379 M09415_2.00.txt\n", "1380 M05444_2.00.txt\n", "1381 M02966_2.00.txt\n", "1382 M00330_2.00.txt\n", "1383 M05259_2.00.txt\n", "1384 M07974_2.00.txt\n", "1385 M03087_2.00.txt\n", "1386 M04388_2.00.txt\n", "1387 M09267_2.00.txt\n", "1388 M04261_2.00.txt\n", "1389 M03204_2.00.txt\n", "1390 M05715_2.00.txt\n", "1391 M03024_2.00.txt\n", "1392 M08009_2.00.txt\n", "1393 M05614_2.00.txt\n", "1394 M09282_2.00.txt\n", "1395 M01173_2.00.txt\n", "1396 M04554_2.00.txt\n", "1397 M04795_2.00.txt\n", "1398 M07578_2.00.txt\n", "1399 M08880_2.00.txt\n", "1400 M04612_2.00.txt\n", "1401 M07671_2.00.txt\n", "1402 M05341_2.00.txt\n", "1403 M05787_2.00.txt\n", "1404 M09412_2.00.txt\n", "1405 M04459_2.00.txt\n", "1406 M05303_2.00.txt\n", "1407 M05707_2.00.txt\n", "1408 M04566_2.00.txt\n", "1409 M00344_2.00.txt\n", "1410 M04461_2.00.txt\n", "1411 M03498_2.00.txt\n", "1412 M07877_2.00.txt\n", "1413 M03516_2.00.txt\n", "1414 M09161_2.00.txt\n", "1415 M04872_2.00.txt\n", "1416 M04188_2.00.txt\n", "1417 M05483_2.00.txt\n", "1418 M09287_2.00.txt\n", "1419 M03133_2.00.txt\n", "1420 M07588_2.00.txt\n", "1421 M04900_2.00.txt\n", "1422 M05435_2.00.txt\n", "1423 M04054_2.00.txt\n", "1424 M04561_2.00.txt\n", "1425 M05122_2.00.txt\n", "1426 M05589_2.00.txt\n", "1427 M09157_2.00.txt\n", "1428 M00367_2.00.txt\n", "1429 M04958_2.00.txt\n", "1430 M04181_2.00.txt\n", "1431 M04876_2.00.txt\n", "1432 M04177_2.00.txt\n", "1433 M04330_2.00.txt\n", "1434 M03130_2.00.txt\n", "1435 M05548_2.00.txt\n", "1436 M07633_2.00.txt\n", "1437 M08002_2.00.txt\n", "1438 M04937_2.00.txt\n", "1439 M03337_2.00.txt\n", "1440 M07846_2.00.txt\n", "1441 M05405_2.00.txt\n", "1442 M07607_2.00.txt\n", "1443 M07608_2.00.txt\n", "1444 M04694_2.00.txt\n", "1445 M05611_2.00.txt\n", "1446 M04707_2.00.txt\n", "1447 M03154_2.00.txt\n", "1448 M05350_2.00.txt\n", "1449 M04309_2.00.txt\n", "1450 M04231_2.00.txt\n", "1451 M07844_2.00.txt\n", "1452 M07733_2.00.txt\n", "1453 M09132_2.00.txt\n", "1454 M08707_2.00.txt\n", "1455 M05073_2.00.txt\n", "1456 M04661_2.00.txt\n", "1457 M05363_2.00.txt\n", "1458 M04748_2.00.txt\n", "1459 M05045_2.00.txt\n", "1460 M04329_2.00.txt\n", "1461 M04647_2.00.txt\n", "1462 M05514_2.00.txt\n", "1463 M08274_2.00.txt\n", "1464 M09271_2.00.txt\n", "1465 M09219_2.00.txt\n", "1466 M04781_2.00.txt\n", "1467 M08955_2.00.txt\n", "1468 M05054_2.00.txt\n", "1469 M04015_2.00.txt\n", "1470 M04712_2.00.txt\n", "1471 M05210_2.00.txt\n", "1472 M08367_2.00.txt\n", "1473 M03007_2.00.txt\n", "1474 M07845_2.00.txt\n", "1475 M04804_2.00.txt\n", "1476 M07768_2.00.txt\n", "1477 M02915_2.00.txt\n", "1478 M07967_2.00.txt\n", "1479 M05423_2.00.txt\n", "1480 M04344_2.00.txt\n", "1481 M08209_2.00.txt\n", "1482 M04817_2.00.txt\n", "1483 M05446_2.00.txt\n", "1484 M05016_2.00.txt\n", "1485 M05532_2.00.txt\n", "1486 M04270_2.00.txt\n", "1487 M08182_2.00.txt\n", "1488 M05370_2.00.txt\n", "1489 M00836_2.00.txt\n", "1490 M03556_2.00.txt\n", "1491 M05471_2.00.txt\n", "1492 M03189_2.00.txt\n", "1493 M04167_2.00.txt\n", "1494 M03380_2.00.txt\n", "1495 M07890_2.00.txt\n", "1496 M04285_2.00.txt\n", "1497 M05652_2.00.txt\n", "1498 M04175_2.00.txt\n", "1499 M07789_2.00.txt\n", "1500 M05437_2.00.txt\n", "1501 M04474_2.00.txt\n", "1502 M05236_2.00.txt\n", "1503 M04438_2.00.txt\n", "1504 M04154_2.00.txt\n", "1505 M04147_2.00.txt\n", "1506 M05264_2.00.txt\n", "1507 M09455_2.00.txt\n", "Motif M09455_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1508 M08082_2.00.txt\n", "1509 M02804_2.00.txt\n", "1510 M05107_2.00.txt\n", "1511 M03207_2.00.txt\n", "1512 M05131_2.00.txt\n", "1513 M08054_2.00.txt\n", "1514 M08254_2.00.txt\n", "1515 M04400_2.00.txt\n", "1516 M04648_2.00.txt\n", "1517 M09364_2.00.txt\n", "1518 M08397_2.00.txt\n", "1519 M04304_2.00.txt\n", "1520 M04528_2.00.txt\n", "1521 M08213_2.00.txt\n", "1522 M02982_2.00.txt\n", "1523 M05612_2.00.txt\n", "1524 M05056_2.00.txt\n", "1525 M03158_2.00.txt\n", "1526 M07913_2.00.txt\n", "1527 M07669_2.00.txt\n", "1528 M04955_2.00.txt\n", "1529 M05465_2.00.txt\n", "1530 M07819_2.00.txt\n" ] }, { "name": "stdout", "output_type": "stream", "text": [ "1531 M05400_2.00.txt\n", "1532 M05094_2.00.txt\n", "1533 M00249_2.00.txt\n", "1534 M07864_2.00.txt\n", "1535 M04888_2.00.txt\n", "1536 M09151_2.00.txt\n", "1537 M04865_2.00.txt\n", "1538 M05880_2.00.txt\n", "Motif M05880_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1539 M04948_2.00.txt\n", "1540 M04596_2.00.txt\n", "1541 M04572_2.00.txt\n", "1542 M03017_2.00.txt\n", "1543 M05808_2.00.txt\n", "1544 M03036_2.00.txt\n", "1545 M05121_2.00.txt\n", "1546 M00372_2.00.txt\n", "1547 M07611_2.00.txt\n", "1548 M03126_2.00.txt\n", "1549 M07712_2.00.txt\n", "1550 M05482_2.00.txt\n", "1551 M04486_2.00.txt\n", "1552 M08346_2.00.txt\n", "1553 M03140_2.00.txt\n", "1554 M03528_2.00.txt\n", "1555 M00314_2.00.txt\n", "1556 M08124_2.00.txt\n", "1557 M03561_2.00.txt\n", "1558 M05322_2.00.txt\n", "1559 M04665_2.00.txt\n", "1560 M08855_2.00.txt\n", "1561 M05038_2.00.txt\n", "1562 M07985_2.00.txt\n", "1563 M04868_2.00.txt\n", "1564 M07810_2.00.txt\n", "1565 M04720_2.00.txt\n", "1566 M04664_2.00.txt\n", "1567 M07893_2.00.txt\n", "1568 M03375_2.00.txt\n", "1569 M09537_2.00.txt\n", "1570 M04682_2.00.txt\n", "1571 M08371_2.00.txt\n", "1572 M04402_2.00.txt\n", "1573 M05597_2.00.txt\n", "1574 M04753_2.00.txt\n", "1575 M08891_2.00.txt\n", "1576 M02782_2.00.txt\n", "1577 M05795_2.00.txt\n", "1578 M04385_2.00.txt\n", "1579 M04061_2.00.txt\n", "1580 M04415_2.00.txt\n", "1581 M08293_2.00.txt\n", "1582 M00255_2.00.txt\n", "1583 M05028_2.00.txt\n", "1584 M08198_2.00.txt\n", "1585 M05454_2.00.txt\n", "1586 M00231_2.00.txt\n", "1587 M05870_2.00.txt\n", "1588 M04790_2.00.txt\n", "1589 M04112_2.00.txt\n", "1590 M04507_2.00.txt\n", "1591 M04549_2.00.txt\n", "1592 M04211_2.00.txt\n", "1593 M03343_2.00.txt\n", "1594 M08065_2.00.txt\n", "1595 M04762_2.00.txt\n", "1596 M08231_2.00.txt\n", "1597 M05639_2.00.txt\n", "1598 M05647_2.00.txt\n", "1599 M05342_2.00.txt\n", "1600 M04334_2.00.txt\n", "1601 M05537_2.00.txt\n", "1602 M03399_2.00.txt\n", "1603 M03213_2.00.txt\n", "1604 M03115_2.00.txt\n", "1605 M05882_2.00.txt\n", "Motif M05882_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1606 M09628_2.00.txt\n", "1607 M02921_2.00.txt\n", "1608 M05817_2.00.txt\n", "1609 M05396_2.00.txt\n", "1610 M09032_2.00.txt\n", "1611 M08344_2.00.txt\n", "1612 M03026_2.00.txt\n", "1613 M08330_2.00.txt\n", "1614 M05470_2.00.txt\n", "1615 M05265_2.00.txt\n", "1616 M08377_2.00.txt\n", "1617 M04043_2.00.txt\n", "1618 M08096_2.00.txt\n", "1619 M02984_2.00.txt\n", "1620 M08929_2.00.txt\n", "1621 M07750_2.00.txt\n", "1622 M05186_2.00.txt\n", "1623 M08853_2.00.txt\n", "1624 M05731_2.00.txt\n", "1625 M02808_2.00.txt\n", "1626 M05263_2.00.txt\n", "1627 M04552_2.00.txt\n", "1628 M05488_2.00.txt\n", "1629 M04860_2.00.txt\n", "1630 M08914_2.00.txt\n", "1631 M05379_2.00.txt\n", "1632 M03019_2.00.txt\n", "1633 M08218_2.00.txt\n", "1634 M04562_2.00.txt\n", "1635 M09257_2.00.txt\n", "1636 M05535_2.00.txt\n", "1637 M03245_2.00.txt\n", "1638 M07634_2.00.txt\n", "1639 M04970_2.00.txt\n", "1640 M04669_2.00.txt\n", "1641 M02887_2.00.txt\n", "1642 M07715_2.00.txt\n", "1643 M07919_2.00.txt\n", "1644 M08366_2.00.txt\n", "1645 M04095_2.00.txt\n", "1646 M02643_2.00.txt\n", "Motif M02643_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1647 M09459_2.00.txt\n", "1648 M09168_2.00.txt\n", "1649 M02907_2.00.txt\n", "1650 M08903_2.00.txt\n", "1651 M03317_2.00.txt\n", "1652 M09521_2.00.txt\n", "Motif M09521_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1653 M07943_2.00.txt\n", "1654 M00224_2.00.txt\n", "1655 M07886_2.00.txt\n", "1656 M08348_2.00.txt\n", "1657 M05871_2.00.txt\n", "Motif M05871_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1658 M04426_2.00.txt\n", "1659 M05232_2.00.txt\n", "1660 M08084_2.00.txt\n", "1661 M02995_2.00.txt\n", "1662 M03180_2.00.txt\n", "1663 M09511_2.00.txt\n", "1664 M08804_2.00.txt\n", "1665 M03151_2.00.txt\n", "1666 M04550_2.00.txt\n", "1667 M04174_2.00.txt\n", "1668 M02894_2.00.txt\n", "1669 M04989_2.00.txt\n", "1670 M05826_2.00.txt\n", "1671 M01931_2.00.txt\n", "1672 M09277_2.00.txt\n", "1673 M02092_2.00.txt\n", "1674 M04849_2.00.txt\n", "1675 M04662_2.00.txt\n", "1676 M05397_2.00.txt\n", "1677 M09088_2.00.txt\n", "1678 M05365_2.00.txt\n", "1679 M05280_2.00.txt\n", "1680 M04283_2.00.txt\n", "1681 M02706_2.00.txt\n", "1682 M05005_2.00.txt\n", "1683 M05368_2.00.txt\n", "1684 M00349_2.00.txt\n", "1685 M08951_2.00.txt\n", "1686 M04728_2.00.txt\n", "1687 M04301_2.00.txt\n", "1688 M05495_2.00.txt\n", "1689 M02799_2.00.txt\n", "1690 M07576_2.00.txt\n", "1691 M03211_2.00.txt\n", "1692 M05696_2.00.txt\n", "1693 M05310_2.00.txt\n", "1694 M09018_2.00.txt\n", "1695 M04289_2.00.txt\n", "1696 M04908_2.00.txt\n", "1697 M09411_2.00.txt\n", "1698 M05838_2.00.txt\n", "1699 M04798_2.00.txt\n", "1700 M05441_2.00.txt\n", "1701 M01502_2.00.txt\n", "1702 M03076_2.00.txt\n", "1703 M03164_2.00.txt\n", "1704 M07594_2.00.txt\n", "1705 M04800_2.00.txt\n", "1706 M02801_2.00.txt\n", "1707 M08302_2.00.txt\n", "1708 M05676_2.00.txt\n", "1709 M09097_2.00.txt\n", "1710 M07955_2.00.txt\n", "1711 M04214_2.00.txt\n", "1712 M00346_2.00.txt\n", "1713 M08155_2.00.txt\n", "1714 M09626_2.00.txt\n", "Motif M09626_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1715 M05544_2.00.txt\n", "1716 M05718_2.00.txt\n", "1717 M07814_2.00.txt\n", "1718 M04686_2.00.txt\n", "1719 M03410_2.00.txt\n", "1720 M03391_2.00.txt\n", "1721 M05418_2.00.txt\n", "1722 M05190_2.00.txt\n", "1723 M04427_2.00.txt\n", "1724 M09260_2.00.txt\n", "1725 M05685_2.00.txt\n", "1726 M04317_2.00.txt\n", "1727 M00306_2.00.txt\n", "1728 M04931_2.00.txt\n", "1729 M07641_2.00.txt\n", "1730 M07950_2.00.txt\n", "1731 M05295_2.00.txt\n", "1732 M05344_2.00.txt\n", "1733 M08354_2.00.txt\n", "1734 M00238_2.00.txt\n", "1735 M04902_2.00.txt\n", "1736 M05633_2.00.txt\n", "1737 M05065_2.00.txt\n", "1738 M03351_2.00.txt\n", "1739 M02791_2.00.txt\n", "1740 M03231_2.00.txt\n", "1741 M04610_2.00.txt\n", "1742 M09023_2.00.txt\n", "1743 M03365_2.00.txt\n", "1744 M09136_2.00.txt\n", "1745 M03029_2.00.txt\n", "1746 M07968_2.00.txt\n", "1747 M05297_2.00.txt\n", "1748 M03103_2.00.txt\n", "1749 M04365_2.00.txt\n", "1750 M05791_2.00.txt\n", "1751 M08862_2.00.txt\n", "1752 M00369_2.00.txt\n", "1753 M05527_2.00.txt\n", "1754 M05632_2.00.txt\n", "1755 M09341_2.00.txt\n", "1756 M02091_2.00.txt\n", "1757 M05034_2.00.txt\n", "1758 M09279_2.00.txt\n", "1759 M02795_2.00.txt\n", "1760 M07629_2.00.txt\n", "1761 M02742_2.00.txt\n", "1762 M07625_2.00.txt\n", "1763 M03315_2.00.txt\n", "1764 M02885_2.00.txt\n", "1765 M07796_2.00.txt\n", "1766 M07998_2.00.txt\n", "1767 M03714_2.00.txt\n", "1768 M02685_2.00.txt\n", "1769 M09636_2.00.txt\n", "Motif M09636_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1770 M05227_2.00.txt\n", "1771 M08392_2.00.txt\n", "1772 M02094_2.00.txt\n", "1773 M07888_2.00.txt\n", "1774 M02992_2.00.txt\n", "1775 M04683_2.00.txt\n", "1776 M03356_2.00.txt\n", "1777 M03305_2.00.txt\n", "1778 M03364_2.00.txt\n", "1779 M07646_2.00.txt\n", "1780 M02959_2.00.txt\n", "1781 M04269_2.00.txt\n", "1782 M07925_2.00.txt\n", "1783 M02794_2.00.txt\n", "1784 M05622_2.00.txt\n", "1785 M07908_2.00.txt\n", "1786 M07767_2.00.txt\n", "1787 M04503_2.00.txt\n", "1788 M04121_2.00.txt\n", "1789 M02385_2.00.txt\n", "1790 M08262_2.00.txt\n", "1791 M03378_2.00.txt\n", "1792 M05624_2.00.txt\n", "1793 M03229_2.00.txt\n", "1794 M09116_2.00.txt\n", "1795 M04308_2.00.txt\n", "1796 M05321_2.00.txt\n", "1797 M04671_2.00.txt\n", "1798 M05014_2.00.txt\n", "1799 M04176_2.00.txt\n", "1800 M04033_2.00.txt\n", "1801 M04300_2.00.txt\n", "1802 M03171_2.00.txt\n", "1803 M05267_2.00.txt\n", "1804 M04218_2.00.txt\n", "1805 M05087_2.00.txt\n", "1806 M04361_2.00.txt\n", "1807 M01911_2.00.txt\n", "1808 M07619_2.00.txt\n", "1809 M04927_2.00.txt\n", "1810 M04403_2.00.txt\n", "1811 M03499_2.00.txt\n", "1812 M07748_2.00.txt\n", "1813 M05463_2.00.txt\n", "1814 M04122_2.00.txt\n", "1815 M03551_2.00.txt\n", "1816 M03000_2.00.txt\n", "1817 M03166_2.00.txt\n", "1818 M09393_2.00.txt\n", "1819 M05276_2.00.txt\n", "1820 M03409_2.00.txt\n", "1821 M09647_2.00.txt\n", "1822 M08284_2.00.txt\n", "1823 M00259_2.00.txt\n", "1824 M08791_2.00.txt\n", "1825 M09138_2.00.txt\n", "1826 M07805_2.00.txt\n", "1827 M04941_2.00.txt\n", "1828 M04597_2.00.txt\n", "1829 M03298_2.00.txt\n", "1830 M02395_2.00.txt\n", "1831 M04816_2.00.txt\n", "1832 M05634_2.00.txt\n", "1833 M05401_2.00.txt\n", "1834 M05828_2.00.txt\n", "1835 M08361_2.00.txt\n", "1836 M04797_2.00.txt\n", "1837 M05366_2.00.txt\n", "1838 M05148_2.00.txt\n", "1839 M04511_2.00.txt\n", "1840 M08394_2.00.txt\n", "1841 M04031_2.00.txt\n", "1842 M04807_2.00.txt\n", "1843 M09022_2.00.txt\n", "1844 M08709_2.00.txt\n", "1845 M05508_2.00.txt\n", "1846 M07621_2.00.txt\n", "1847 M03123_2.00.txt\n", "1848 M02736_2.00.txt\n", "1849 M09133_2.00.txt\n", "1850 M07832_2.00.txt\n", "1851 M04785_2.00.txt\n", "1852 M04726_2.00.txt\n", "1853 M05243_2.00.txt\n", "1854 M04799_2.00.txt\n", "1855 M04986_2.00.txt\n", "1856 M04169_2.00.txt\n", "1857 M03398_2.00.txt\n", "1858 M03124_2.00.txt\n", "1859 M08314_2.00.txt\n", "1860 M07988_2.00.txt\n", "1861 M05700_2.00.txt\n", "1862 M05157_2.00.txt\n", "1863 M05743_2.00.txt\n", "1864 M04891_2.00.txt\n", "1865 M07737_2.00.txt\n", "1866 M08811_2.00.txt\n", "1867 M02972_2.00.txt\n", "1868 M02642_2.00.txt\n", "Motif M02642_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1869 M03469_2.00.txt\n", "1870 M05146_2.00.txt\n", "1871 M05516_2.00.txt\n", "1872 M05542_2.00.txt\n", "1873 M05320_2.00.txt\n", "1874 M04078_2.00.txt\n", "1875 M03384_2.00.txt\n", "1876 M00354_2.00.txt\n", "1877 M05278_2.00.txt\n", "1878 M07900_2.00.txt\n", "1879 M04187_2.00.txt\n", "1880 M04420_2.00.txt\n", "1881 M02020_2.00.txt\n", "1882 M05026_2.00.txt\n", "1883 M07708_2.00.txt\n", "1884 M04395_2.00.txt\n", "1885 M08248_2.00.txt\n", "1886 M04633_2.00.txt\n", "1887 M09348_2.00.txt\n", "1888 M08718_2.00.txt\n", "1889 M04316_2.00.txt\n", "1890 M05002_2.00.txt\n", "1891 M04012_2.00.txt\n", "1892 M07661_2.00.txt\n", "1893 M08867_2.00.txt\n", "1894 M00347_2.00.txt\n", "1895 M04077_2.00.txt\n", "1896 M05662_2.00.txt\n", "1897 M05592_2.00.txt\n", "1898 M07995_2.00.txt\n", "1899 M09152_2.00.txt\n", "1900 M07720_2.00.txt\n", "1901 M03226_2.00.txt\n", "1902 M07566_2.00.txt\n", "1903 M04909_2.00.txt\n", "1904 M07599_2.00.txt\n", "1905 M08118_2.00.txt\n", "1906 M08199_2.00.txt\n", "1907 M09281_2.00.txt\n" ] }, { "name": "stdout", "output_type": "stream", "text": [ "1908 M05501_2.00.txt\n", "1909 M08241_2.00.txt\n", "1910 M04759_2.00.txt\n", "1911 M09627_2.00.txt\n", "Motif M09627_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1912 M08727_2.00.txt\n", "1913 M03318_2.00.txt\n", "1914 M09163_2.00.txt\n", "1915 M02766_2.00.txt\n", "1916 M05081_2.00.txt\n", "1917 M04533_2.00.txt\n", "1918 M00968_2.00.txt\n", "1919 M02681_2.00.txt\n", "1920 M03205_2.00.txt\n", "1921 M05060_2.00.txt\n", "1922 M04172_2.00.txt\n", "1923 M07946_2.00.txt\n", "1924 M00294_2.00.txt\n", "1925 M02762_2.00.txt\n", "1926 M05864_2.00.txt\n", "1927 M03480_2.00.txt\n", "1928 M01503_2.00.txt\n", "1929 M08728_2.00.txt\n", "1930 M03088_2.00.txt\n", "1931 M04096_2.00.txt\n", "1932 M03045_2.00.txt\n", "1933 M04021_2.00.txt\n", "1934 M02991_2.00.txt\n", "1935 M07563_2.00.txt\n", "1936 M03020_2.00.txt\n", "1937 M02979_2.00.txt\n", "1938 M09434_2.00.txt\n", "1939 M07689_2.00.txt\n", "1940 M03884_2.00.txt\n", "1941 M05327_2.00.txt\n", "1942 M03350_2.00.txt\n", "1943 M05036_2.00.txt\n", "1944 M03312_2.00.txt\n", "1945 M03082_2.00.txt\n", "1946 M05591_2.00.txt\n", "1947 M08017_2.00.txt\n", "1948 M07699_2.00.txt\n", "1949 M04267_2.00.txt\n", "1950 M08073_2.00.txt\n", "1951 M05810_2.00.txt\n", "1952 M08253_2.00.txt\n", "1953 M00262_2.00.txt\n", "1954 M08224_2.00.txt\n", "1955 M08004_2.00.txt\n", "1956 M04998_2.00.txt\n", "1957 M03068_2.00.txt\n", "1958 M02777_2.00.txt\n", "1959 M07924_2.00.txt\n", "1960 M05476_2.00.txt\n", "1961 M03485_2.00.txt\n", "1962 M02827_2.00.txt\n", "1963 M07990_2.00.txt\n", "1964 M03320_2.00.txt\n", "1965 M07596_2.00.txt\n", "1966 M08925_2.00.txt\n", "1967 M04885_2.00.txt\n", "1968 M08347_2.00.txt\n", "1969 M03452_2.00.txt\n", "1970 M05124_2.00.txt\n", "1971 M02821_2.00.txt\n", "1972 M04255_2.00.txt\n", "1973 M05097_2.00.txt\n", "1974 M05573_2.00.txt\n", "1975 M04826_2.00.txt\n", "1976 M03478_2.00.txt\n", "1977 M08250_2.00.txt\n", "1978 M00312_2.00.txt\n", "1979 M04346_2.00.txt\n", "1980 M08725_2.00.txt\n", "1981 M04053_2.00.txt\n", "1982 M03341_2.00.txt\n", "1983 M08457_2.00.txt\n", "1984 M05788_2.00.txt\n", "1985 M03474_2.00.txt\n", "1986 M08334_2.00.txt\n", "1987 M09558_2.00.txt\n", "Motif M09558_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1988 M05362_2.00.txt\n", "1989 M04137_2.00.txt\n", "1990 M08798_2.00.txt\n", "1991 M05584_2.00.txt\n", "1992 M03519_2.00.txt\n", "1993 M09222_2.00.txt\n", "1994 M04412_2.00.txt\n", "1995 M05702_2.00.txt\n", "1996 M05455_2.00.txt\n", "1997 M04017_2.00.txt\n", "1998 M08865_2.00.txt\n", "1999 M07800_2.00.txt\n", "2000 M03447_2.00.txt\n", "2001 M04864_2.00.txt\n", "2002 M08724_2.00.txt\n", "2003 M07579_2.00.txt\n", "2004 M04354_2.00.txt\n", "2005 M05613_2.00.txt\n", "2006 M08300_2.00.txt\n", "2007 M00983_2.00.txt\n", "2008 M04050_2.00.txt\n", "2009 M05282_2.00.txt\n", "2010 M08922_2.00.txt\n", "2011 M05502_2.00.txt\n", "2012 M08233_2.00.txt\n", "2013 M04156_2.00.txt\n", "2014 M04508_2.00.txt\n", "2015 M07765_2.00.txt\n", "2016 M07802_2.00.txt\n", "2017 M03383_2.00.txt\n", "2018 M08940_2.00.txt\n", "2019 M04773_2.00.txt\n", "2020 M08792_2.00.txt\n", "2021 M04653_2.00.txt\n", "2022 M05741_2.00.txt\n", "2023 M07736_2.00.txt\n", "2024 M03395_2.00.txt\n", "2025 M07862_2.00.txt\n", "2026 M04280_2.00.txt\n", "2027 M04708_2.00.txt\n", "2028 M07782_2.00.txt\n", "2029 M08805_2.00.txt\n", "2030 M03136_2.00.txt\n", "2031 M04547_2.00.txt\n", "2032 M03193_2.00.txt\n", "2033 M07804_2.00.txt\n", "2034 M04541_2.00.txt\n", "2035 M04621_2.00.txt\n", "2036 M04555_2.00.txt\n", "2037 M03240_2.00.txt\n", "2038 M08117_2.00.txt\n", "2039 M05511_2.00.txt\n", "2040 M05041_2.00.txt\n", "2041 M05284_2.00.txt\n", "2042 M04979_2.00.txt\n", "2043 M04688_2.00.txt\n", "2044 M04783_2.00.txt\n", "2045 M05796_2.00.txt\n", "2046 M09058_2.00.txt\n", "2047 M04870_2.00.txt\n", "2048 M07667_2.00.txt\n", "2049 M04680_2.00.txt\n", "2050 M03190_2.00.txt\n", "2051 M04472_2.00.txt\n", "2052 M07637_2.00.txt\n", "2053 M01204_2.00.txt\n", "2054 M04695_2.00.txt\n", "2055 M03477_2.00.txt\n", "2056 M07615_2.00.txt\n", "2057 M09150_2.00.txt\n", "2058 M02830_2.00.txt\n", "2059 M09546_2.00.txt\n", "Motif M09546_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2060 M02810_2.00.txt\n", "2061 M07656_2.00.txt\n", "2062 M05461_2.00.txt\n", "2063 M07825_2.00.txt\n", "2064 M05274_2.00.txt\n", "2065 M00236_2.00.txt\n", "2066 M04585_2.00.txt\n", "2067 M03319_2.00.txt\n", "2068 M04118_2.00.txt\n", "2069 M08280_2.00.txt\n", "2070 M08362_2.00.txt\n", "2071 M05850_2.00.txt\n", "Motif M05850_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2072 M02989_2.00.txt\n", "2073 M07754_2.00.txt\n", "2074 M00967_2.00.txt\n", "2075 M09351_2.00.txt\n", "2076 M04164_2.00.txt\n", "2077 M05513_2.00.txt\n", "2078 M09398_2.00.txt\n", "2079 M05442_2.00.txt\n", "2080 M05247_2.00.txt\n", "2081 M05575_2.00.txt\n", "2082 M05820_2.00.txt\n", "2083 M05142_2.00.txt\n", "2084 M07794_2.00.txt\n", "2085 M00339_2.00.txt\n", "2086 M08889_2.00.txt\n", "2087 M05617_2.00.txt\n", "2088 M05462_2.00.txt\n", "2089 M08141_2.00.txt\n", "2090 M04810_2.00.txt\n", "2091 M03291_2.00.txt\n", "2092 M08074_2.00.txt\n", "2093 M05629_2.00.txt\n", "2094 M09456_2.00.txt\n", "Motif M09456_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2095 M04056_2.00.txt\n", "2096 M07915_2.00.txt\n", "2097 M00352_2.00.txt\n", "2098 M08782_2.00.txt\n", "2099 M05868_2.00.txt\n", "Motif M05868_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2100 M05812_2.00.txt\n", "2101 M02759_2.00.txt\n", "2102 M05625_2.00.txt\n", "2103 M08902_2.00.txt\n", "2104 M05493_2.00.txt\n", "2105 M02758_2.00.txt\n", "2106 M04042_2.00.txt\n", "2107 M05384_2.00.txt\n", "2108 M02805_2.00.txt\n", "2109 M04775_2.00.txt\n", "2110 M00738_2.00.txt\n", "2111 M04913_2.00.txt\n", "2112 M03043_2.00.txt\n", "2113 M00373_2.00.txt\n", "2114 M07879_2.00.txt\n", "2115 M04252_2.00.txt\n", "2116 M03353_2.00.txt\n", "2117 M03222_2.00.txt\n", "2118 M09530_2.00.txt\n", "2119 M08339_2.00.txt\n", "2120 M07660_2.00.txt\n", "2121 M08928_2.00.txt\n", "2122 M04479_2.00.txt\n", "2123 M05150_2.00.txt\n", "2124 M05181_2.00.txt\n", "2125 M05138_2.00.txt\n", "2126 M05231_2.00.txt\n", "2127 M03074_2.00.txt\n", "2128 M05510_2.00.txt\n", "2129 M04254_2.00.txt\n", "2130 M05773_2.00.txt\n", "2131 M08350_2.00.txt\n", "2132 M08325_2.00.txt\n", "2133 M00325_2.00.txt\n", "2134 M08875_2.00.txt\n", "2135 M05648_2.00.txt\n", "2136 M05052_2.00.txt\n", "2137 M04569_2.00.txt\n", "2138 M04806_2.00.txt\n", "2139 M04558_2.00.txt\n", "2140 M07701_2.00.txt\n", "2141 M07945_2.00.txt\n", "2142 M05199_2.00.txt\n", "2143 M08924_2.00.txt\n", "2144 M07587_2.00.txt\n", "2145 M00361_2.00.txt\n", "2146 M07757_2.00.txt\n", "2147 M04721_2.00.txt\n", "2148 M08324_2.00.txt\n", "2149 M04372_2.00.txt\n", "2150 M05607_2.00.txt\n", "2151 M04557_2.00.txt\n", "2152 M02975_2.00.txt\n", "2153 M08307_2.00.txt\n", "2154 M03571_2.00.txt\n", "2155 M07670_2.00.txt\n", "2156 M08105_2.00.txt\n", "2157 M09249_2.00.txt\n", "2158 M07626_2.00.txt\n", "2159 M01171_2.00.txt\n", "2160 M05561_2.00.txt\n", "2161 M05724_2.00.txt\n", "2162 M03034_2.00.txt\n", "2163 M04067_2.00.txt\n", "2164 M08240_2.00.txt\n", "2165 M08267_2.00.txt\n", "2166 M07724_2.00.txt\n", "2167 M02754_2.00.txt\n", "2168 M00736_2.00.txt\n", "2169 M07595_2.00.txt\n", "2170 M08326_2.00.txt\n", "2171 M09541_2.00.txt\n", "Motif M09541_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2172 M08291_2.00.txt\n", "2173 M02964_2.00.txt\n", "2174 M01247_2.00.txt\n", "2175 M04487_2.00.txt\n", "2176 M02854_2.00.txt\n", "2177 M09239_2.00.txt\n", "2178 M05473_2.00.txt\n", "2179 M05615_2.00.txt\n", "2180 M04130_2.00.txt\n", "2181 M08088_2.00.txt\n", "2182 M07702_2.00.txt\n", "2183 M03472_2.00.txt\n", "2184 M02394_2.00.txt\n", "2185 M05298_2.00.txt\n", "2186 M03488_2.00.txt\n", "2187 M03549_2.00.txt\n", "2188 M03311_2.00.txt\n", "2189 M03508_2.00.txt\n", "2190 M08075_2.00.txt\n", "2191 M03554_2.00.txt\n", "2192 M05879_2.00.txt\n", "Motif M05879_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2193 M03715_2.00.txt\n", "2194 M02911_2.00.txt\n", "2195 M02836_2.00.txt\n", "2196 M04895_2.00.txt\n", "2197 M05847_2.00.txt\n", "Motif M05847_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2198 M05160_2.00.txt\n", "2199 M05456_2.00.txt\n", "2200 M02858_2.00.txt\n", "2201 M05347_2.00.txt\n", "2202 M00228_2.00.txt\n", "2203 M02890_2.00.txt\n", "2204 M04339_2.00.txt\n", "2205 M04026_2.00.txt\n", "2206 M05425_2.00.txt\n", "2207 M07628_2.00.txt\n", "2208 M04442_2.00.txt\n", "2209 M04381_2.00.txt\n", "2210 M04469_2.00.txt\n", "2211 M04675_2.00.txt\n", "2212 M08310_2.00.txt\n", "2213 M03159_2.00.txt\n", "2214 M04774_2.00.txt\n", "2215 M09125_2.00.txt\n", "2216 M03327_2.00.txt\n", "2217 M05093_2.00.txt\n", "2218 M04988_2.00.txt\n", "2219 M03021_2.00.txt\n", "2220 M04277_2.00.txt\n", "2221 M04751_2.00.txt\n", "2222 M09128_2.00.txt\n", "2223 M04638_2.00.txt\n", "2224 M04443_2.00.txt\n", "2225 M00250_2.00.txt\n", "2226 M05469_2.00.txt\n", "2227 M05288_2.00.txt\n", "2228 M01507_2.00.txt\n", "2229 M04779_2.00.txt\n", "2230 M04702_2.00.txt\n", "2231 M08055_2.00.txt\n", "2232 M09489_2.00.txt\n", "Motif M09489_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2233 M03149_2.00.txt\n", "2234 M07972_2.00.txt\n", "2235 M07684_2.00.txt\n", "2236 M08263_2.00.txt\n", "2237 M03217_2.00.txt\n", "2238 M03354_2.00.txt\n", "2239 M05271_2.00.txt\n", "2240 M07766_2.00.txt\n", "2241 M00230_2.00.txt\n", "2242 M04953_2.00.txt\n", "2243 M04568_2.00.txt\n", "2244 M02789_2.00.txt\n", "2245 M02796_2.00.txt\n", "2246 M09036_2.00.txt\n", "2247 M08739_2.00.txt\n", "2248 M09638_2.00.txt\n", "2249 M07627_2.00.txt\n", "2250 M04046_2.00.txt\n", "2251 M04407_2.00.txt\n", "2252 M07837_2.00.txt\n", "2253 M05770_2.00.txt\n", "2254 M08813_2.00.txt\n", "2255 M03400_2.00.txt\n", "2256 M04457_2.00.txt\n", "2257 M04475_2.00.txt\n", "2258 M04103_2.00.txt\n", "2259 M05806_2.00.txt\n", "2260 M07662_2.00.txt\n", "2261 M04032_2.00.txt\n", "2262 M08961_2.00.txt\n", "2263 M04151_2.00.txt\n", "2264 M02874_2.00.txt\n", "2265 M03497_2.00.txt\n", "2266 M08711_2.00.txt\n", "2267 M08012_2.00.txt\n", "2268 M05492_2.00.txt\n", "2269 M07580_2.00.txt\n", "2270 M09392_2.00.txt\n", "2271 M05637_2.00.txt\n", "2272 M02922_2.00.txt\n", "2273 M04983_2.00.txt\n", "2274 M04915_2.00.txt\n", "2275 M04028_2.00.txt\n", "2276 M08191_2.00.txt\n", "2277 M00233_2.00.txt\n", "2278 M01930_2.00.txt\n", "2279 M05207_2.00.txt\n", "2280 M09611_2.00.txt\n", "Motif M09611_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2281 M02834_2.00.txt\n", "2282 M05285_2.00.txt\n", "2283 M09093_2.00.txt\n", "2284 M01928_2.00.txt\n", "2285 M04431_2.00.txt\n", "2286 M08939_2.00.txt\n" ] }, { "name": "stdout", "output_type": "stream", "text": [ "2287 M03089_2.00.txt\n", "2288 M05381_2.00.txt\n", "2289 M04772_2.00.txt\n", "2290 M03015_2.00.txt\n", "2291 M03302_2.00.txt\n", "2292 M08795_2.00.txt\n", "2293 M00276_2.00.txt\n", "2294 M04242_2.00.txt\n", "2295 M02895_2.00.txt\n", "2296 M03468_2.00.txt\n", "2297 M02917_2.00.txt\n", "2298 M02897_2.00.txt\n", "2299 M05603_2.00.txt\n", "2300 M00364_2.00.txt\n", "2301 M07816_2.00.txt\n", "2302 M02831_2.00.txt\n", "2303 M05805_2.00.txt\n", "2304 M07792_2.00.txt\n", "2305 M04537_2.00.txt\n", "2306 M00345_2.00.txt\n", "2307 M08132_2.00.txt\n", "2308 M05630_2.00.txt\n", "2309 M08908_2.00.txt\n", "2310 M03143_2.00.txt\n", "2311 M05240_2.00.txt\n", "2312 M03067_2.00.txt\n", "2313 M04463_2.00.txt\n", "2314 M05061_2.00.txt\n", "2315 M08905_2.00.txt\n", "2316 M08308_2.00.txt\n", "2317 M04556_2.00.txt\n", "2318 M05865_2.00.txt\n", "Motif M05865_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2319 M04667_2.00.txt\n", "2320 M07785_2.00.txt\n", "2321 M02095_2.00.txt\n", "2322 M05560_2.00.txt\n", "2323 M09443_2.00.txt\n", "2324 M08810_2.00.txt\n", "2325 M04782_2.00.txt\n", "2326 M08178_2.00.txt\n", "2327 M08133_2.00.txt\n", "2328 M03473_2.00.txt\n", "2329 M08944_2.00.txt\n", "2330 M04236_2.00.txt\n", "2331 M02970_2.00.txt\n", "2332 M04899_2.00.txt\n", "2333 M04727_2.00.txt\n", "2334 M05759_2.00.txt\n", "2335 M03563_2.00.txt\n", "2336 M02737_2.00.txt\n", "2337 M02927_2.00.txt\n", "2338 M03493_2.00.txt\n", "2339 M05732_2.00.txt\n", "2340 M03924_2.00.txt\n", "2341 M04364_2.00.txt\n", "2342 M04419_2.00.txt\n", "2343 M05726_2.00.txt\n", "2344 M05050_2.00.txt\n", "2345 M04530_2.00.txt\n", "2346 M00252_2.00.txt\n", "2347 M09297_2.00.txt\n", "2348 M07843_2.00.txt\n", "2349 M09343_2.00.txt\n", "2350 M08783_2.00.txt\n", "2351 M07909_2.00.txt\n", "2352 M02963_2.00.txt\n", "2353 M09086_2.00.txt\n", "2354 M03885_2.00.txt\n", "2355 M09375_2.00.txt\n", "2356 M08387_2.00.txt\n", "2357 M03492_2.00.txt\n", "2358 M09096_2.00.txt\n", "2359 M04106_2.00.txt\n", "2360 M02803_2.00.txt\n", "2361 M05340_2.00.txt\n", "2362 M08037_2.00.txt\n", "2363 M05832_2.00.txt\n", "Motif M05832_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2364 M05523_2.00.txt\n", "2365 M07569_2.00.txt\n", "2366 M03413_2.00.txt\n", "2367 M03509_2.00.txt\n", "2368 M07923_2.00.txt\n", "2369 M04923_2.00.txt\n", "2370 M04041_2.00.txt\n", "2371 M05194_2.00.txt\n", "2372 M04965_2.00.txt\n", "2373 M03161_2.00.txt\n", "2374 M09486_2.00.txt\n", "2375 M04599_2.00.txt\n", "2376 M08108_2.00.txt\n", "2377 M04922_2.00.txt\n", "2378 M08249_2.00.txt\n", "2379 M03359_2.00.txt\n", "2380 M05155_2.00.txt\n", "2381 M04102_2.00.txt\n", "2382 M08916_2.00.txt\n", "2383 M01511_2.00.txt\n", "2384 M04408_2.00.txt\n", "2385 M05196_2.00.txt\n", "2386 M04548_2.00.txt\n", "2387 M04462_2.00.txt\n", "2388 M07780_2.00.txt\n", "2389 M07842_2.00.txt\n", "2390 M07774_2.00.txt\n", "2391 M04856_2.00.txt\n", "2392 M05184_2.00.txt\n", "2393 M09451_2.00.txt\n", "Motif M09451_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2394 M05238_2.00.txt\n", "2395 M04542_2.00.txt\n", "2396 M09221_2.00.txt\n", "2397 M07828_2.00.txt\n", "2398 M05722_2.00.txt\n", "2399 M03196_2.00.txt\n", "2400 M03346_2.00.txt\n", "2401 M05074_2.00.txt\n", "2402 M05219_2.00.txt\n", "2403 M05080_2.00.txt\n", "2404 M05178_2.00.txt\n", "2405 M05136_2.00.txt\n", "2406 M08364_2.00.txt\n", "2407 M03025_2.00.txt\n", "2408 M07751_2.00.txt\n", "2409 M03111_2.00.txt\n", "2410 M05372_2.00.txt\n", "2411 M08271_2.00.txt\n", "2412 M03135_2.00.txt\n", "2413 M04841_2.00.txt\n", "2414 M07706_2.00.txt\n", "2415 M08378_2.00.txt\n", "2416 M09545_2.00.txt\n", "2417 M05803_2.00.txt\n", "2418 M03224_2.00.txt\n", "2419 M03569_2.00.txt\n", "2420 M03008_2.00.txt\n", "2421 M09059_2.00.txt\n", "2422 M05408_2.00.txt\n", "2423 M08878_2.00.txt\n", "2424 M05505_2.00.txt\n", "2425 M03012_2.00.txt\n", "2426 M08275_2.00.txt\n", "2427 M05512_2.00.txt\n", "2428 M04905_2.00.txt\n", "2429 M05293_2.00.txt\n", "2430 M04627_2.00.txt\n", "2431 M07961_2.00.txt\n", "2432 M02741_2.00.txt\n", "2433 M00277_2.00.txt\n", "2434 M03303_2.00.txt\n", "2435 M04972_2.00.txt\n", "2436 M08013_2.00.txt\n", "2437 M02641_2.00.txt\n", "Motif M02641_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2438 M02732_2.00.txt\n", "2439 M04296_2.00.txt\n", "2440 M05209_2.00.txt\n", "2441 M08001_2.00.txt\n", "2442 M02908_2.00.txt\n", "2443 M04264_2.00.txt\n", "2444 M03051_2.00.txt\n", "2445 M08164_2.00.txt\n", "2446 M09268_2.00.txt\n", "2447 M08852_2.00.txt\n", "2448 M03514_2.00.txt\n", "2449 M02755_2.00.txt\n", "2450 M04832_2.00.txt\n", "2451 M09390_2.00.txt\n", "2452 M04757_2.00.txt\n", "2453 M03013_2.00.txt\n", "2454 M01914_2.00.txt\n", "2455 M04573_2.00.txt\n", "2456 M05877_2.00.txt\n", "Motif M05877_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2457 M05117_2.00.txt\n", "2458 M07682_2.00.txt\n", "2459 M04614_2.00.txt\n", "2460 M05168_2.00.txt\n", "2461 M05193_2.00.txt\n", "2462 M03466_2.00.txt\n", "2463 M08056_2.00.txt\n", "2464 M03241_2.00.txt\n", "2465 M05063_2.00.txt\n", "2466 M05375_2.00.txt\n", "2467 M04932_2.00.txt\n", "2468 M00355_2.00.txt\n", "2469 M09030_2.00.txt\n", "2470 M05556_2.00.txt\n", "2471 M07695_2.00.txt\n", "2472 M04493_2.00.txt\n", "2473 M05079_2.00.txt\n", "2474 M02765_2.00.txt\n", "2475 M04495_2.00.txt\n", "2476 M08812_2.00.txt\n", "2477 M02845_2.00.txt\n", "2478 M05066_2.00.txt\n", "2479 M05088_2.00.txt\n", "2480 M05668_2.00.txt\n", "2481 M09361_2.00.txt\n", "2482 M08864_2.00.txt\n", "2483 M09500_2.00.txt\n", "Motif M09500_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2484 M09298_2.00.txt\n", "2485 M08064_2.00.txt\n", "2486 M05821_2.00.txt\n", "2487 M04734_2.00.txt\n", "2488 M04591_2.00.txt\n", "2489 M08850_2.00.txt\n", "2490 M03132_2.00.txt\n", "2491 M04153_2.00.txt\n", "2492 M04212_2.00.txt\n", "2493 M05314_2.00.txt\n", "2494 M03393_2.00.txt\n", "2495 M05605_2.00.txt\n", "2496 M02785_2.00.txt\n", "2497 M08333_2.00.txt\n", "2498 M05172_2.00.txt\n", "2499 M04323_2.00.txt\n", "2500 M05170_2.00.txt\n", "2501 M04505_2.00.txt\n", "2502 M04668_2.00.txt\n", "2503 M04886_2.00.txt\n", "2504 M02853_2.00.txt\n", "2505 M08234_2.00.txt\n", "2506 M09274_2.00.txt\n", "2507 M03408_2.00.txt\n", "2508 M03244_2.00.txt\n", "2509 M08005_2.00.txt\n", "2510 M09250_2.00.txt\n", "2511 M04383_2.00.txt\n", "2512 M04192_2.00.txt\n", "2513 M03177_2.00.txt\n", "2514 M05382_2.00.txt\n", "2515 M05448_2.00.txt\n", "2516 M05792_2.00.txt\n", "2517 M08153_2.00.txt\n", "2518 M07734_2.00.txt\n", "2519 M05564_2.00.txt\n", "2520 M04879_2.00.txt\n", "2521 M09044_2.00.txt\n", "2522 M03555_2.00.txt\n", "2523 M03529_2.00.txt\n", "2524 M07817_2.00.txt\n", "2525 M08919_2.00.txt\n", "2526 M04725_2.00.txt\n", "2527 M07603_2.00.txt\n", "2528 M04079_2.00.txt\n", "2529 M03361_2.00.txt\n", "2530 M07658_2.00.txt\n", "2531 M08953_2.00.txt\n", "2532 M00245_2.00.txt\n", "2533 M02784_2.00.txt\n", "2534 M05305_2.00.txt\n", "2535 M04867_2.00.txt\n", "2536 M09505_2.00.txt\n", "2537 M04010_2.00.txt\n", "2538 M07610_2.00.txt\n", "2539 M09160_2.00.txt\n", "2540 M08937_2.00.txt\n", "2541 M05188_2.00.txt\n", "2542 M07609_2.00.txt\n", "2543 M05798_2.00.txt\n", "2544 M02946_2.00.txt\n", "2545 M04622_2.00.txt\n", "2546 M08298_2.00.txt\n", "2547 M05411_2.00.txt\n", "2548 M00735_2.00.txt\n", "2549 M05673_2.00.txt\n", "2550 M09167_2.00.txt\n", "2551 M07855_2.00.txt\n", "2552 M07676_2.00.txt\n", "2553 M07710_2.00.txt\n", "2554 M02788_2.00.txt\n", "2555 M02901_2.00.txt\n", "2556 M07790_2.00.txt\n", "2557 M05458_2.00.txt\n", "2558 M09559_2.00.txt\n", "2559 M04883_2.00.txt\n", "2560 M03023_2.00.txt\n", "2561 M08296_2.00.txt\n", "2562 M00338_2.00.txt\n", "2563 M05784_2.00.txt\n", "2564 M04387_2.00.txt\n", "2565 M04742_2.00.txt\n", "2566 M08957_2.00.txt\n", "2567 M00313_2.00.txt\n", "2568 M08741_2.00.txt\n", "2569 M08854_2.00.txt\n", "2570 M03179_2.00.txt\n", "2571 M08186_2.00.txt\n", "2572 M08732_2.00.txt\n", "2573 M03042_2.00.txt\n", "2574 M00283_2.00.txt\n", "2575 M07941_2.00.txt\n", "2576 M04732_2.00.txt\n", "2577 M03576_2.00.txt\n", "2578 M07973_2.00.txt\n", "2579 M05279_2.00.txt\n", "2580 M08166_2.00.txt\n", "2581 M02835_2.00.txt\n", "2582 M05658_2.00.txt\n", "2583 M08921_2.00.txt\n", "2584 M03163_2.00.txt\n", "2585 M03152_2.00.txt\n", "2586 M05010_2.00.txt\n", "2587 M04750_2.00.txt\n", "2588 M05552_2.00.txt\n", "2589 M02888_2.00.txt\n", "2590 M09290_2.00.txt\n", "2591 M03039_2.00.txt\n", "2592 M02886_2.00.txt\n", "2593 M08129_2.00.txt\n", "2594 M05075_2.00.txt\n", "2595 M02923_2.00.txt\n", "2596 M00257_2.00.txt\n", "2597 M04737_2.00.txt\n", "2598 M04643_2.00.txt\n", "2599 M08800_2.00.txt\n", "2600 M04689_2.00.txt\n", "2601 M09117_2.00.txt\n", "2602 M05528_2.00.txt\n", "2603 M07878_2.00.txt\n", "2604 M04367_2.00.txt\n", "2605 M03481_2.00.txt\n", "2606 M07902_2.00.txt\n", "2607 M07986_2.00.txt\n", "2608 M05246_2.00.txt\n", "2609 M07829_2.00.txt\n", "2610 M04964_2.00.txt\n", "2611 M04168_2.00.txt\n", "2612 M05736_2.00.txt\n", "2613 M08281_2.00.txt\n", "2614 M05562_2.00.txt\n", "2615 M02790_2.00.txt\n", "2616 M02893_2.00.txt\n", "2617 M05443_2.00.txt\n", "2618 M07942_2.00.txt\n", "2619 M08808_2.00.txt\n", "2620 M05474_2.00.txt\n", "2621 M03309_2.00.txt\n", "2622 M04166_2.00.txt\n", "2623 M04048_2.00.txt\n", "2624 M09130_2.00.txt\n", "2625 M04770_2.00.txt\n", "2626 M07705_2.00.txt\n", "2627 M04802_2.00.txt\n", "2628 M08787_2.00.txt\n", "2629 M09265_2.00.txt\n", "2630 M05708_2.00.txt\n", "2631 M08357_2.00.txt\n", "2632 M09387_2.00.txt\n", "2633 M08872_2.00.txt\n", "2634 M05018_2.00.txt\n", "2635 M05230_2.00.txt\n", "2636 M08295_2.00.txt\n", "2637 M08915_2.00.txt\n", "2638 M00220_2.00.txt\n", "2639 M07959_2.00.txt\n", "2640 M04358_2.00.txt\n", "2641 M08278_2.00.txt\n", "2642 M05599_2.00.txt\n", "2643 M07830_2.00.txt\n", "2644 M04691_2.00.txt\n", "2645 M04512_2.00.txt\n", "2646 M00271_2.00.txt\n", "2647 M04946_2.00.txt\n", "2648 M09606_2.00.txt\n", "Motif M09606_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2649 M04024_2.00.txt\n", "2650 M04186_2.00.txt\n", "2651 M05312_2.00.txt\n", "2652 M04701_2.00.txt\n", "2653 M08171_2.00.txt\n", "2654 M05203_2.00.txt\n", "2655 M04736_2.00.txt\n", "2656 M04575_2.00.txt\n", "2657 M07713_2.00.txt\n", "2658 M09061_2.00.txt\n", "2659 M05223_2.00.txt\n", "2660 M08328_2.00.txt\n", "2661 M04524_2.00.txt\n", "2662 M02786_2.00.txt\n", "2663 M05179_2.00.txt\n" ] }, { "name": "stdout", "output_type": "stream", "text": [ "2664 M09153_2.00.txt\n", "2665 M08900_2.00.txt\n", "2666 M08007_2.00.txt\n", "2667 M02993_2.00.txt\n", "2668 M03114_2.00.txt\n", "2669 M03567_2.00.txt\n", "2670 M03373_2.00.txt\n", "2671 M03348_2.00.txt\n", "2672 M09610_2.00.txt\n", "Motif M09610_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2673 M08793_2.00.txt\n", "2674 M04117_2.00.txt\n", "2675 M04332_2.00.txt\n", "2676 M04027_2.00.txt\n", "2677 M09050_2.00.txt\n", "2678 M02996_2.00.txt\n", "2679 M03340_2.00.txt\n", "2680 M07786_2.00.txt\n", "2681 M04977_2.00.txt\n", "2682 M09235_2.00.txt\n", "2683 M09237_2.00.txt\n", "2684 M07672_2.00.txt\n", "2685 M05540_2.00.txt\n", "2686 M07651_2.00.txt\n", "2687 M03394_2.00.txt\n", "2688 M08323_2.00.txt\n", "2689 M04949_2.00.txt\n", "2690 M02710_2.00.txt\n", "2691 M08936_2.00.txt\n", "2692 M05449_2.00.txt\n", "2693 M07598_2.00.txt\n", "2694 M04861_2.00.txt\n", "2695 M04290_2.00.txt\n", "2696 M07954_2.00.txt\n", "2697 M07616_2.00.txt\n", "2698 M00278_2.00.txt\n", "2699 M03496_2.00.txt\n", "2700 M05237_2.00.txt\n", "2701 M04520_2.00.txt\n", "2702 M09336_2.00.txt\n", "2703 M05699_2.00.txt\n", "2704 M03446_2.00.txt\n", "2705 M04974_2.00.txt\n", "2706 M08352_2.00.txt\n", "2707 M04208_2.00.txt\n", "2708 M07584_2.00.txt\n", "2709 M02978_2.00.txt\n", "2710 M04577_2.00.txt\n", "2711 M04880_2.00.txt\n", "2712 M08373_2.00.txt\n", "2713 M03118_2.00.txt\n", "2714 M04480_2.00.txt\n", "2715 M05719_2.00.txt\n", "2716 M00284_2.00.txt\n", "2717 M09524_2.00.txt\n", "2718 M03223_2.00.txt\n", "2719 M07971_2.00.txt\n", "2720 M05714_2.00.txt\n", "2721 M04471_2.00.txt\n", "2722 M07889_2.00.txt\n", "2723 M05206_2.00.txt\n", "2724 M04934_2.00.txt\n", "2725 M05781_2.00.txt\n", "2726 M05256_2.00.txt\n", "2727 M02746_2.00.txt\n", "2728 M07749_2.00.txt\n", "2729 M07787_2.00.txt\n", "2730 M05682_2.00.txt\n", "2731 M05487_2.00.txt\n", "2732 M02747_2.00.txt\n", "2733 M03165_2.00.txt\n", "2734 M04155_2.00.txt\n", "2735 M09534_2.00.txt\n", "Motif M09534_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2736 M05753_2.00.txt\n", "2737 M05593_2.00.txt\n", "2738 M05789_2.00.txt\n", "2739 M04539_2.00.txt\n", "2740 M03580_2.00.txt\n", "2741 M05385_2.00.txt\n", "2742 M04844_2.00.txt\n", "2743 M05606_2.00.txt\n", "2744 M09158_2.00.txt\n", "2745 M09143_2.00.txt\n", "2746 M05570_2.00.txt\n", "2747 M04884_2.00.txt\n", "2748 M03219_2.00.txt\n", "2749 M09060_2.00.txt\n", "2750 M08717_2.00.txt\n", "2751 M08379_2.00.txt\n", "2752 M04299_2.00.txt\n", "2753 M08393_2.00.txt\n", "2754 M04069_2.00.txt\n", "2755 M04506_2.00.txt\n", "2756 M05403_2.00.txt\n", "2757 M03091_2.00.txt\n", "2758 M08014_2.00.txt\n", "2759 M09461_2.00.txt\n", "2760 M05545_2.00.txt\n", "2761 M03366_2.00.txt\n", "2762 M02780_2.00.txt\n", "2763 M07989_2.00.txt\n", "2764 M05111_2.00.txt\n", "2765 M09263_2.00.txt\n", "2766 M03574_2.00.txt\n", "2767 M04377_2.00.txt\n", "2768 M03225_2.00.txt\n", "2769 M04604_2.00.txt\n", "2770 M05090_2.00.txt\n", "2771 M08279_2.00.txt\n", "2772 M05024_2.00.txt\n", "2773 M08003_2.00.txt\n", "2774 M08026_2.00.txt\n", "2775 M08462_2.00.txt\n", "2776 M05688_2.00.txt\n", "2777 M09550_2.00.txt\n", "Motif M09550_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2778 M02945_2.00.txt\n", "2779 M05804_2.00.txt\n", "2780 M00360_2.00.txt\n", "2781 M05177_2.00.txt\n", "2782 M05588_2.00.txt\n", "2783 M05705_2.00.txt\n", "2784 M00350_2.00.txt\n", "2785 M00331_2.00.txt\n", "2786 M04835_2.00.txt\n", "2787 M05225_2.00.txt\n", "2788 M02913_2.00.txt\n", "2789 M04432_2.00.txt\n", "2790 M00311_2.00.txt\n", "2791 M09055_2.00.txt\n", "2792 M09389_2.00.txt\n", "2793 M05202_2.00.txt\n", "2794 M02852_2.00.txt\n", "2795 M05834_2.00.txt\n", "Motif M05834_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2796 M04833_2.00.txt\n", "2797 M04947_2.00.txt\n", "2798 M08445_2.00.txt\n", "2799 M03300_2.00.txt\n", "2800 M04018_2.00.txt\n", "2801 M09629_2.00.txt\n", "Motif M09629_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2802 M08242_2.00.txt\n", "2803 M05386_2.00.txt\n", "2804 M08259_2.00.txt\n", "2805 M02760_2.00.txt\n", "2806 M08094_2.00.txt\n", "2807 M04298_2.00.txt\n", "2808 M07892_2.00.txt\n", "2809 M05665_2.00.txt\n", "2810 M05334_2.00.txt\n", "2811 M04085_2.00.txt\n", "2812 M04221_2.00.txt\n", "2813 M08019_2.00.txt\n", "2814 M08897_2.00.txt\n", "2815 M08386_2.00.txt\n", "2816 M04158_2.00.txt\n", "2817 M03162_2.00.txt\n", "2818 M04094_2.00.txt\n", "2819 M05851_2.00.txt\n", "2820 M00740_2.00.txt\n", "2821 M08083_2.00.txt\n", "2822 M05413_2.00.txt\n", "2823 M08187_2.00.txt\n", "2824 M05291_2.00.txt\n", "2825 M08860_2.00.txt\n", "2826 M08175_2.00.txt\n", "2827 M08202_2.00.txt\n", "2828 M04241_2.00.txt\n", "2829 M04213_2.00.txt\n", "2830 M08947_2.00.txt\n", "2831 M02761_2.00.txt\n", "2832 M05751_2.00.txt\n", "2833 M02967_2.00.txt\n", "2834 M04630_2.00.txt\n", "2835 M00988_2.00.txt\n", "2836 M03550_2.00.txt\n", "2837 M05301_2.00.txt\n", "2838 M08160_2.00.txt\n", "2839 M07917_2.00.txt\n", "2840 M05778_2.00.txt\n", "2841 M03083_2.00.txt\n", "2842 M00371_2.00.txt\n", "2843 M04700_2.00.txt\n", "2844 M05102_2.00.txt\n", "2845 M00267_2.00.txt\n", "2846 M05420_2.00.txt\n", "2847 M03233_2.00.txt\n", "2848 M07769_2.00.txt\n", "2849 M05780_2.00.txt\n", "2850 M07644_2.00.txt\n", "2851 M03232_2.00.txt\n", "2852 M00268_2.00.txt\n", "2853 M05519_2.00.txt\n", "2854 M05760_2.00.txt\n", "2855 M02800_2.00.txt\n", "2856 M02772_2.00.txt\n", "2857 M07799_2.00.txt\n", "2858 M09156_2.00.txt\n", "2859 M05390_2.00.txt\n", "2860 M00269_2.00.txt\n", "2861 M05620_2.00.txt\n", "2862 M04035_2.00.txt\n", "2863 M03002_2.00.txt\n", "2864 M00356_2.00.txt\n", "2865 M02666_2.00.txt\n", "2866 M04022_2.00.txt\n", "2867 M07815_2.00.txt\n", "2868 M07688_2.00.txt\n", "2869 M08111_2.00.txt\n", "2870 M08911_2.00.txt\n", "2871 M05339_2.00.txt\n", "2872 M04433_2.00.txt\n", "2873 M04907_2.00.txt\n", "2874 M04478_2.00.txt\n", "2875 M03504_2.00.txt\n", "2876 M05349_2.00.txt\n", "2877 M02440_2.00.txt\n", "2878 M02767_2.00.txt\n", "2879 M07613_2.00.txt\n", "2880 M09417_2.00.txt\n", "2881 M05120_2.00.txt\n", "2882 M03304_2.00.txt\n", "2883 M04105_2.00.txt\n", "2884 M03310_2.00.txt\n", "2885 M05539_2.00.txt\n", "2886 M04866_2.00.txt\n", "2887 M08400_2.00.txt\n", "2888 M08245_2.00.txt\n", "2889 M03325_2.00.txt\n", "2890 M05402_2.00.txt\n", "2891 M07632_2.00.txt\n", "2892 M08343_2.00.txt\n", "2893 M08871_2.00.txt\n", "2894 M05710_2.00.txt\n", "2895 M03577_2.00.txt\n", "2896 M08269_2.00.txt\n", "2897 M05746_2.00.txt\n", "2898 M03197_2.00.txt\n", "2899 M01978_2.00.txt\n", "2900 M00280_2.00.txt\n", "2901 M03030_2.00.txt\n", "2902 M07743_2.00.txt\n", "2903 M05245_2.00.txt\n", "2904 M04391_2.00.txt\n", "2905 M07683_2.00.txt\n", "2906 M01509_2.00.txt\n", "2907 M07978_2.00.txt\n", "2908 M05092_2.00.txt\n", "2909 M03191_2.00.txt\n", "2910 M08318_2.00.txt\n", "2911 M05009_2.00.txt\n", "2912 M09529_2.00.txt\n", "Motif M09529_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2913 M04624_2.00.txt\n", "2914 M08886_2.00.txt\n", "2915 M09634_2.00.txt\n", "Motif M09634_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2916 M07867_2.00.txt\n", "2917 M05526_2.00.txt\n", "2918 M04996_2.00.txt\n", "2919 M09490_2.00.txt\n", "2920 M05388_2.00.txt\n", "2921 M05509_2.00.txt\n", "2922 M04929_2.00.txt\n", "2923 M02665_2.00.txt\n", "2924 M08885_2.00.txt\n", "2925 M05481_2.00.txt\n", "2926 M04938_2.00.txt\n", "2927 M05173_2.00.txt\n", "2928 M05218_2.00.txt\n", "2929 M05799_2.00.txt\n", "2930 M04281_2.00.txt\n", "2931 M05292_2.00.txt\n", "2932 M04535_2.00.txt\n", "2933 M00300_2.00.txt\n", "2934 M07571_2.00.txt\n", "2935 M09142_2.00.txt\n", "2936 M03035_2.00.txt\n", "2937 M07981_2.00.txt\n", "2938 M09631_2.00.txt\n", "Motif M09631_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2939 M05595_2.00.txt\n", "2940 M05651_2.00.txt\n", "2941 M05112_2.00.txt\n", "2942 M05600_2.00.txt\n", "2943 M05325_2.00.txt\n", "2944 M05776_2.00.txt\n", "2945 M07746_2.00.txt\n", "2946 M02999_2.00.txt\n", "2947 M05785_2.00.txt\n", "2948 M02929_2.00.txt\n", "2949 M04110_2.00.txt\n", "2950 M04660_2.00.txt\n", "2951 M07823_2.00.txt\n", "2952 M09064_2.00.txt\n", "2953 M05353_2.00.txt\n", "2954 M05234_2.00.txt\n", "2955 M04039_2.00.txt\n", "2956 M08336_2.00.txt\n", "2957 M03090_2.00.txt\n", "2958 M05165_2.00.txt\n", "2959 M08784_2.00.txt\n", "2960 M05546_2.00.txt\n", "2961 M01976_2.00.txt\n", "2962 M04740_2.00.txt\n", "2963 M02664_2.00.txt\n", "2964 M07884_2.00.txt\n", "2965 M04969_2.00.txt\n", "2966 M03206_2.00.txt\n", "2967 M03110_2.00.txt\n", "2968 M05727_2.00.txt\n", "2969 M05335_2.00.txt\n", "2970 M04635_2.00.txt\n", "2971 M05135_2.00.txt\n", "2972 M04348_2.00.txt\n", "2973 M09442_2.00.txt\n", "2974 M05333_2.00.txt\n", "2975 M05360_2.00.txt\n", "2976 M07758_2.00.txt\n", "2977 M05269_2.00.txt\n", "2978 M04120_2.00.txt\n", "2979 M02745_2.00.txt\n", "2980 M09145_2.00.txt\n", "2981 M03524_2.00.txt\n", "2982 M02734_2.00.txt\n", "2983 M03102_2.00.txt\n", "2984 M04681_2.00.txt\n", "2985 M08788_2.00.txt\n", "2986 M08156_2.00.txt\n", "2987 M05733_2.00.txt\n", "2988 M05608_2.00.txt\n", "2989 M03239_2.00.txt\n", "2990 M05217_2.00.txt\n", "2991 M07680_2.00.txt\n", "2992 M09216_2.00.txt\n", "2993 M09508_2.00.txt\n", "2994 M03080_2.00.txt\n", "2995 M04363_2.00.txt\n", "2996 M02811_2.00.txt\n", "2997 M03460_2.00.txt\n", "2998 M07681_2.00.txt\n", "2999 M00235_2.00.txt\n", "3000 M03566_2.00.txt\n", "3001 M08036_2.00.txt\n", "3002 M04230_2.00.txt\n", "3003 M08859_2.00.txt\n", "3004 M02904_2.00.txt\n", "3005 M05667_2.00.txt\n", "3006 M08712_2.00.txt\n", "3007 M03069_2.00.txt\n", "3008 M08066_2.00.txt\n", "3009 M05754_2.00.txt\n", "3010 M05027_2.00.txt\n", "3011 M03199_2.00.txt\n", "3012 M04894_2.00.txt\n", "3013 M04710_2.00.txt\n", "3014 M04747_2.00.txt\n", "3015 M07636_2.00.txt\n", "3016 M02974_2.00.txt\n", "3017 M07655_2.00.txt\n", "3018 M07979_2.00.txt\n", "3019 M07875_2.00.txt\n", "3020 M08920_2.00.txt\n", "3021 M02880_2.00.txt\n", "3022 M04384_2.00.txt\n", "3023 M07709_2.00.txt\n", "3024 M03505_2.00.txt\n", "3025 M05822_2.00.txt\n", "3026 M05768_2.00.txt\n", "3027 M04119_2.00.txt\n", "3028 M03237_2.00.txt\n", "3029 M08803_2.00.txt\n", "3030 M03449_2.00.txt\n", "3031 M04265_2.00.txt\n", "3032 M08272_2.00.txt\n", "3033 M09623_2.00.txt\n", "Motif M09623_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3034 M05076_2.00.txt\n", "3035 M08227_2.00.txt\n", "3036 M08365_2.00.txt\n", "3037 M04485_2.00.txt\n", "3038 M05576_2.00.txt\n", "3039 M07860_2.00.txt\n", "3040 M05500_2.00.txt\n", "3041 M05559_2.00.txt\n" ] }, { "name": "stdout", "output_type": "stream", "text": [ "3042 M00737_2.00.txt\n", "3043 M08934_2.00.txt\n", "3044 M04581_2.00.txt\n", "3045 M01508_2.00.txt\n", "3046 M03368_2.00.txt\n", "3047 M04282_2.00.txt\n", "3048 M05091_2.00.txt\n", "3049 M03169_2.00.txt\n", "3050 M05421_2.00.txt\n", "3051 M04086_2.00.txt\n", "3052 M03047_2.00.txt\n", "3053 M08059_2.00.txt\n", "3054 M04246_2.00.txt\n", "3055 M05551_2.00.txt\n", "3056 M05681_2.00.txt\n", "3057 M04220_2.00.txt\n", "3058 M02707_2.00.txt\n", "3059 M03578_2.00.txt\n", "3060 M05137_2.00.txt\n", "3061 M09363_2.00.txt\n", "3062 M07976_2.00.txt\n", "3063 M05346_2.00.txt\n", "3064 M03442_2.00.txt\n", "3065 M04711_2.00.txt\n", "3066 M02842_2.00.txt\n", "3067 M03104_2.00.txt\n", "3068 M04303_2.00.txt\n", "3069 M05158_2.00.txt\n", "3070 M05678_2.00.txt\n", "3071 M08802_2.00.txt\n", "3072 M00335_2.00.txt\n", "3073 M02764_2.00.txt\n", "3074 M03018_2.00.txt\n", "3075 M04531_2.00.txt\n", "3076 M00229_2.00.txt\n", "3077 M03482_2.00.txt\n", "3078 M08051_2.00.txt\n", "3079 M04724_2.00.txt\n", "3080 M04839_2.00.txt\n", "3081 M03041_2.00.txt\n", "3082 M00266_2.00.txt\n", "3083 M05175_2.00.txt\n", "3084 M05057_2.00.txt\n", "3085 M04513_2.00.txt\n", "3086 M04097_2.00.txt\n", "3087 M09238_2.00.txt\n", "3088 M00357_2.00.txt\n", "3089 M03050_2.00.txt\n", "3090 M09510_2.00.txt\n", "Motif M09510_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3091 M03160_2.00.txt\n", "3092 M08895_2.00.txt\n", "3093 M05260_2.00.txt\n", "3094 M05567_2.00.txt\n", "3095 M02740_2.00.txt\n", "3096 M07677_2.00.txt\n", "3097 M05407_2.00.txt\n", "3098 M05835_2.00.txt\n", "Motif M05835_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3099 M03487_2.00.txt\n", "3100 M00232_2.00.txt\n", "3101 M05794_2.00.txt\n", "3102 M05166_2.00.txt\n", "3103 M04082_2.00.txt\n", "3104 M03357_2.00.txt\n", "3105 M05801_2.00.txt\n", "3106 M03195_2.00.txt\n", "3107 M05580_2.00.txt\n", "3108 M04545_2.00.txt\n", "3109 M05008_2.00.txt\n", "3110 M04020_2.00.txt\n", "3111 M08870_2.00.txt\n", "3112 M07568_2.00.txt\n", "3113 M05389_2.00.txt\n", "3114 M05846_2.00.txt\n", "Motif M05846_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3115 M04322_2.00.txt\n", "3116 M08070_2.00.txt\n", "3117 M05452_2.00.txt\n", "3118 M08941_2.00.txt\n", "3119 M03521_2.00.txt\n", "3120 M05432_2.00.txt\n", "3121 M05318_2.00.txt\n", "3122 M03471_2.00.txt\n", "3123 M07612_2.00.txt\n", "3124 M07831_2.00.txt\n", "3125 M05782_2.00.txt\n", "3126 M09166_2.00.txt\n", "3127 M05101_2.00.txt\n", "3128 M04890_2.00.txt\n", "3129 M04342_2.00.txt\n", "3130 M07664_2.00.txt\n", "3131 M09506_2.00.txt\n", "3132 M08866_2.00.txt\n", "3133 M09251_2.00.txt\n", "3134 M07993_2.00.txt\n", "3135 M05853_2.00.txt\n", "Motif M05853_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3136 M04025_2.00.txt\n", "3137 M07904_2.00.txt\n", "3138 M03121_2.00.txt\n", "3139 M07906_2.00.txt\n", "3140 M04811_2.00.txt\n", "3141 M04719_2.00.txt\n", "3142 M05156_2.00.txt\n", "3143 M00309_2.00.txt\n", "3144 M05250_2.00.txt\n", "3145 M08208_2.00.txt\n", "3146 M04336_2.00.txt\n", "3147 M04311_2.00.txt\n", "3148 M04910_2.00.txt\n", "3149 M07690_2.00.txt\n", "3150 M07597_2.00.txt\n", "3151 M08176_2.00.txt\n", "3152 M00241_2.00.txt\n", "3153 M00286_2.00.txt\n", "3154 M07727_2.00.txt\n", "3155 M05051_2.00.txt\n", "3156 M04987_2.00.txt\n", "3157 M05457_2.00.txt\n", "3158 M05255_2.00.txt\n", "3159 M02441_2.00.txt\n", "3160 M03403_2.00.txt\n", "3161 M03046_2.00.txt\n", "3162 M05675_2.00.txt\n", "3163 M03503_2.00.txt\n", "3164 M04942_2.00.txt\n", "3165 M04657_2.00.txt\n", "3166 M07891_2.00.txt\n", "3167 M01849_2.00.txt\n", "3168 M09642_2.00.txt\n", "Motif M09642_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3169 M08742_2.00.txt\n", "3170 M02774_2.00.txt\n", "3171 M04952_2.00.txt\n", "3172 M09147_2.00.txt\n", "3173 M07564_2.00.txt\n", "3174 M09090_2.00.txt\n", "3175 M02729_2.00.txt\n", "3176 M08283_2.00.txt\n", "3177 M05239_2.00.txt\n", "3178 M04739_2.00.txt\n", "3179 M03388_2.00.txt\n", "3180 M03181_2.00.txt\n", "3181 M07694_2.00.txt\n", "3182 M08884_2.00.txt\n", "3183 M04674_2.00.txt\n", "3184 M05125_2.00.txt\n", "3185 M04193_2.00.txt\n", "3186 M08349_2.00.txt\n", "3187 M07697_2.00.txt\n", "3188 M03349_2.00.txt\n", "3189 M05387_2.00.txt\n", "3190 M04698_2.00.txt\n", "3191 M05414_2.00.txt\n", "3192 M04083_2.00.txt\n", "3193 M03005_2.00.txt\n", "3194 M04678_2.00.txt\n", "3195 M01499_2.00.txt\n", "3196 M04730_2.00.txt\n", "3197 M04406_2.00.txt\n", "3198 M03334_2.00.txt\n", "3199 M08154_2.00.txt\n", "3200 M04219_2.00.txt\n", "3201 M04716_2.00.txt\n", "3202 M07920_2.00.txt\n", "3203 M08217_2.00.txt\n", "3204 M03236_2.00.txt\n", "3205 M04501_2.00.txt\n", "3206 M07741_2.00.txt\n", "3207 M03210_2.00.txt\n", "3208 M08277_2.00.txt\n", "3209 M04029_2.00.txt\n", "3210 M07692_2.00.txt\n", "3211 M08219_2.00.txt\n", "3212 M04417_2.00.txt\n", "3213 M04250_2.00.txt\n", "3214 M05626_2.00.txt\n", "3215 M03333_2.00.txt\n", "3216 M07582_2.00.txt\n", "3217 M04743_2.00.txt\n", "3218 M04013_2.00.txt\n", "3219 M02943_2.00.txt\n", "3220 M05185_2.00.txt\n", "3221 M03049_2.00.txt\n", "3222 M04414_2.00.txt\n", "3223 M04199_2.00.txt\n", "3224 M05748_2.00.txt\n", "3225 M09484_2.00.txt\n", "3226 M04422_2.00.txt\n", "3227 M02899_2.00.txt\n", "3228 M01165_2.00.txt\n", "3229 M04745_2.00.txt\n", "3230 M03389_2.00.txt\n", "3231 M03557_2.00.txt\n", "3232 M09597_2.00.txt\n", "Motif M09597_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3233 M08713_2.00.txt\n", "3234 M07649_2.00.txt\n", "3235 M05214_2.00.txt\n", "3236 M02855_2.00.txt\n", "3237 M03405_2.00.txt\n", "3238 M08067_2.00.txt\n", "3239 M09159_2.00.txt\n", "3240 M07742_2.00.txt\n", "3241 M02825_2.00.txt\n", "3242 M03182_2.00.txt\n", "3243 M04068_2.00.txt\n", "3244 M03371_2.00.txt\n", "3245 M04138_2.00.txt\n", "3246 M09458_2.00.txt\n", "Motif M09458_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3247 M04195_2.00.txt\n", "3248 M04126_2.00.txt\n", "3249 M04355_2.00.txt\n", "3250 M05149_2.00.txt\n", "3251 M04076_2.00.txt\n", "3252 M04016_2.00.txt\n", "3253 M07922_2.00.txt\n", "3254 M03107_2.00.txt\n", "3255 M04131_2.00.txt\n", "3256 M03016_2.00.txt\n", "3257 M04229_2.00.txt\n", "3258 M08723_2.00.txt\n", "3259 M03367_2.00.txt\n", "3260 M08161_2.00.txt\n", "3261 M09531_2.00.txt\n", "3262 M07994_2.00.txt\n", "3263 M08190_2.00.txt\n", "3264 M03170_2.00.txt\n", "3265 M05779_2.00.txt\n", "3266 M04825_2.00.txt\n", "3267 M09621_2.00.txt\n", "Motif M09621_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3268 M08703_2.00.txt\n", "3269 M01259_2.00.txt\n", "3270 M00246_2.00.txt\n", "3271 M08890_2.00.txt\n", "3272 M05744_2.00.txt\n", "3273 M05355_2.00.txt\n", "3274 M05145_2.00.txt\n", "3275 M09293_2.00.txt\n", "3276 M02087_2.00.txt\n", "3277 M08958_2.00.txt\n", "3278 M08000_2.00.txt\n", "3279 M08120_2.00.txt\n", "3280 M03294_2.00.txt\n", "3281 M04203_2.00.txt\n", "3282 M08896_2.00.txt\n", "3283 M05438_2.00.txt\n", "3284 M03306_2.00.txt\n", "3285 M02988_2.00.txt\n", "3286 M05616_2.00.txt\n", "3287 M09029_2.00.txt\n", "3288 M08072_2.00.txt\n", "3289 M05046_2.00.txt\n", "3290 M08863_2.00.txt\n", "3291 M09085_2.00.txt\n", "3292 M03591_2.00.txt\n", "3293 M02096_2.00.txt\n", "3294 M04768_2.00.txt\n", "3295 M05786_2.00.txt\n", "3296 M03094_2.00.txt\n", "3297 M07853_2.00.txt\n", "3298 M04215_2.00.txt\n", "3299 M08715_2.00.txt\n", "3300 M05429_2.00.txt\n", "3301 M03099_2.00.txt\n", "3302 M09535_2.00.txt\n", "Motif M09535_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3303 M05762_2.00.txt\n", "3304 M04926_2.00.txt\n", "3305 M08943_2.00.txt\n", "3306 M02990_2.00.txt\n", "3307 M01203_2.00.txt\n", "3308 M07813_2.00.txt\n", "3309 M04466_2.00.txt\n", "3310 M05242_2.00.txt\n", "3311 M04279_2.00.txt\n", "3312 M08873_2.00.txt\n", "3313 M05300_2.00.txt\n", "3314 M08396_2.00.txt\n", "3315 M07865_2.00.txt\n", "3316 M04560_2.00.txt\n", "3317 M03339_2.00.txt\n", "3318 M02846_2.00.txt\n", "3319 M04570_2.00.txt\n", "3320 M05689_2.00.txt\n", "3321 M03209_2.00.txt\n", "3322 M09435_2.00.txt\n", "3323 M05679_2.00.txt\n", "3324 M09165_2.00.txt\n", "3325 M08149_2.00.txt\n", "3326 M07666_2.00.txt\n", "3327 M02779_2.00.txt\n", "3328 M05543_2.00.txt\n", "3329 M04171_2.00.txt\n", "3330 M05657_2.00.txt\n", "3331 M08134_2.00.txt\n", "3332 M02985_2.00.txt\n", "3333 M02773_2.00.txt\n", "3334 M08359_2.00.txt\n", "3335 M04717_2.00.txt\n", "3336 M09063_2.00.txt\n", "3337 M04956_2.00.txt\n", "3338 M08306_2.00.txt\n", "3339 M04204_2.00.txt\n", "3340 M09337_2.00.txt\n", "3341 M00299_2.00.txt\n", "3342 M02798_2.00.txt\n", "3343 M07980_2.00.txt\n", "3344 M00217_2.00.txt\n", "3345 M09278_2.00.txt\n", "3346 M02953_2.00.txt\n", "3347 M08930_2.00.txt\n", "3348 M05761_2.00.txt\n", "3349 M00221_2.00.txt\n", "3350 M09594_2.00.txt\n", "3351 M07953_2.00.txt\n", "3352 M05324_2.00.txt\n", "3353 M05391_2.00.txt\n", "3354 M05898_2.00.txt\n", "Motif M05898_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3355 M07575_2.00.txt\n", "3356 M00359_2.00.txt\n", "3357 M03299_2.00.txt\n", "3358 M08006_2.00.txt\n", "3359 M03106_2.00.txt\n", "3360 M03032_2.00.txt\n", "3361 M08329_2.00.txt\n", "3362 M08109_2.00.txt\n", "3363 M09432_2.00.txt\n", "3364 M05894_2.00.txt\n", "Motif M05894_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3365 M03445_2.00.txt\n", "3366 M09427_2.00.txt\n", "3367 M05563_2.00.txt\n", "3368 M04741_2.00.txt\n", "3369 M05767_2.00.txt\n", "3370 M08898_2.00.txt\n", "3371 M04409_2.00.txt\n", "3372 M05098_2.00.txt\n", "3373 M09625_2.00.txt\n", "Motif M09625_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3374 M05338_2.00.txt\n", "3375 M07679_2.00.txt\n" ] }, { "name": "stdout", "output_type": "stream", "text": [ "3376 M05531_2.00.txt\n", "3377 M04976_2.00.txt\n", "3378 M03079_2.00.txt\n", "3379 M05317_2.00.txt\n", "3380 M04834_2.00.txt\n", "3381 M00320_2.00.txt\n", "3382 M08737_2.00.txt\n", "3383 M07970_2.00.txt\n", "3384 M04769_2.00.txt\n", "3385 M09488_2.00.txt\n", "3386 M00296_2.00.txt\n", "3387 M04428_2.00.txt\n", "3388 M05841_2.00.txt\n", "Motif M05841_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3389 M02949_2.00.txt\n", "3390 M08315_2.00.txt\n", "3391 M05582_2.00.txt\n", "3392 M08729_2.00.txt\n", "3393 M03141_2.00.txt\n", "3394 M04642_2.00.txt\n", "3395 M04502_2.00.txt\n", "3396 M05827_2.00.txt\n", "3397 M08716_2.00.txt\n", "3398 M07775_2.00.txt\n", "3399 M03095_2.00.txt\n", "3400 M04693_2.00.txt\n", "3401 M05472_2.00.txt\n", "3402 M02645_2.00.txt\n", "Motif M02645_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3403 M00248_2.00.txt\n", "3404 M07614_2.00.txt\n", "3405 M04842_2.00.txt\n", "3406 M04828_2.00.txt\n", "3407 M04574_2.00.txt\n", "3408 M09094_2.00.txt\n", "3409 M07851_2.00.txt\n", "3410 M05329_2.00.txt\n", "3411 M05337_2.00.txt\n", "3412 M09605_2.00.txt\n", "Motif M09605_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3413 M05555_2.00.txt\n", "3414 M05176_2.00.txt\n", "3415 M05286_2.00.txt\n", "3416 M03559_2.00.txt\n", "3417 M02711_2.00.txt\n", "3418 M07572_2.00.txt\n", "3419 M09098_2.00.txt\n", "3420 M05533_2.00.txt\n", "3421 M00298_2.00.txt\n", "3422 M04133_2.00.txt\n", "3423 M08881_2.00.txt\n", "3424 M07838_2.00.txt\n", "3425 M07898_2.00.txt\n", "3426 M04319_2.00.txt\n", "3427 M03336_2.00.txt\n", "3428 M04370_2.00.txt\n", "3429 M04198_2.00.txt\n", "3430 M04374_2.00.txt\n", "3431 M02903_2.00.txt\n", "3432 M04473_2.00.txt\n", "3433 M03560_2.00.txt\n", "3434 M08261_2.00.txt\n", "3435 M01912_2.00.txt\n", "3436 M05110_2.00.txt\n", "3437 M09084_2.00.txt\n", "3438 M07650_2.00.txt\n", "3439 M03148_2.00.txt\n", "3440 M04393_2.00.txt\n", "3441 M09031_2.00.txt\n", "3442 M07773_2.00.txt\n", "3443 M05221_2.00.txt\n", "3444 M08092_2.00.txt\n", "3445 M04752_2.00.txt\n", "3446 M08035_2.00.txt\n", "3447 M07605_2.00.txt\n", "3448 M09608_2.00.txt\n", "Motif M09608_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3449 M02691_2.00.txt\n", "3450 M04375_2.00.txt\n", "3451 M07762_2.00.txt\n", "3452 M02910_2.00.txt\n", "3453 M05640_2.00.txt\n", "3454 M04483_2.00.txt\n", "3455 M04331_2.00.txt\n", "3456 M02965_2.00.txt\n", "3457 M04945_2.00.txt\n", "3458 M08297_2.00.txt\n", "3459 M05409_2.00.txt\n", "3460 M07788_2.00.txt\n", "3461 M00293_2.00.txt\n", "3462 M02969_2.00.txt\n", "3463 M04792_2.00.txt\n", "3464 M03376_2.00.txt\n", "3465 M08157_2.00.txt\n", "3466 M09034_2.00.txt\n", "3467 M08874_2.00.txt\n", "3468 M00282_2.00.txt\n", "3469 M04286_2.00.txt\n", "3470 M04456_2.00.txt\n", "3471 M05345_2.00.txt\n", "3472 M07722_2.00.txt\n", "3473 M00337_2.00.txt\n", "3474 M08049_2.00.txt\n", "3475 M04140_2.00.txt\n", "3476 M05557_2.00.txt\n", "3477 M04878_2.00.txt\n", "3478 M05534_2.00.txt\n", "3479 M03387_2.00.txt\n", "3480 M07960_2.00.txt\n", "3481 M05628_2.00.txt\n", "3482 M05503_2.00.txt\n", "3483 M07914_2.00.txt\n", "3484 M04113_2.00.txt\n", "3485 M05114_2.00.txt\n", "3486 M04787_2.00.txt\n", "3487 M04484_2.00.txt\n", "3488 M04143_2.00.txt\n", "3489 M00253_2.00.txt\n", "3490 M07964_2.00.txt\n", "3491 M04968_2.00.txt\n", "3492 M02771_2.00.txt\n", "3493 M08848_2.00.txt\n", "3494 M02961_2.00.txt\n", "3495 M07771_2.00.txt\n", "3496 M09148_2.00.txt\n", "3497 M04889_2.00.txt\n", "3498 M05451_2.00.txt\n", "3499 M08265_2.00.txt\n", "3500 M08786_2.00.txt\n", "3501 M07952_2.00.txt\n", "3502 M08923_2.00.txt\n", "3503 M05001_2.00.txt\n", "3504 M05410_2.00.txt\n", "3505 M05085_2.00.txt\n", "3506 M05674_2.00.txt\n", "3507 M04232_2.00.txt\n", "3508 M04292_2.00.txt\n", "3509 M05554_2.00.txt\n", "3510 M04224_2.00.txt\n", "3511 M08236_2.00.txt\n", "3512 M04580_2.00.txt\n", "3513 M00223_2.00.txt\n", "3514 M00377_2.00.txt\n", "3515 M03564_2.00.txt\n", "3516 M07586_2.00.txt\n", "3517 M05641_2.00.txt\n", "3518 M02952_2.00.txt\n", "3519 M04593_2.00.txt\n", "3520 M04776_2.00.txt\n", "3521 M04584_2.00.txt\n", "3522 M04114_2.00.txt\n", "3523 M04993_2.00.txt\n", "3524 M09234_2.00.txt\n", "3525 M05169_2.00.txt\n", "3526 M04287_2.00.txt\n", "3527 M07590_2.00.txt\n", "3528 M00985_2.00.txt\n", "3529 M05252_2.00.txt\n", "3530 M07685_2.00.txt\n", "3531 M09256_2.00.txt\n", "3532 M04070_2.00.txt\n", "3533 M03081_2.00.txt\n", "3534 M04340_2.00.txt\n", "3535 M05383_2.00.txt\n", "3536 M09501_2.00.txt\n", "Motif M09501_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3537 M05254_2.00.txt\n", "3538 M09049_2.00.txt\n", "3539 M03028_2.00.txt\n", "3540 M09295_2.00.txt\n", "3541 M05104_2.00.txt\n", "3542 M07761_2.00.txt\n", "3543 M04435_2.00.txt\n", "3544 M04347_2.00.txt\n", "3545 M08882_2.00.txt\n", "3546 M07928_2.00.txt\n", "3547 M07574_2.00.txt\n", "3548 M04233_2.00.txt\n", "3549 M07803_2.00.txt\n", "3550 M07640_2.00.txt\n", "3551 M05530_2.00.txt\n", "3552 M04723_2.00.txt\n", "3553 M08091_2.00.txt\n", "3554 M05763_2.00.txt\n", "3555 M05709_2.00.txt\n", "3556 M05547_2.00.txt\n", "3557 M07840_2.00.txt\n", "3558 M05816_2.00.txt\n", "3559 M05163_2.00.txt\n", "3560 M08388_2.00.txt\n", "3561 M04692_2.00.txt\n", "3562 M04679_2.00.txt\n", "3563 M08385_2.00.txt\n", "3564 M04376_2.00.txt\n", "3565 M08710_2.00.txt\n", "3566 M07863_2.00.txt\n", "3567 M04731_2.00.txt\n", "3568 M04631_2.00.txt\n", "3569 M05004_2.00.txt\n", "3570 M05035_2.00.txt\n", "3571 M08321_2.00.txt\n", "3572 M04801_2.00.txt\n", "3573 M05823_2.00.txt\n", "3574 M08243_2.00.txt\n", "3575 M09048_2.00.txt\n", "3576 M04411_2.00.txt\n", "3577 M05777_2.00.txt\n", "3578 M03548_2.00.txt\n", "3579 M05180_2.00.txt\n", "3580 M07723_2.00.txt\n", "3581 M02881_2.00.txt\n", "3582 M05020_2.00.txt\n", "3583 M07740_2.00.txt\n", "3584 M02793_2.00.txt\n", "3585 M04284_2.00.txt\n", "3586 M09131_2.00.txt\n", "3587 M04447_2.00.txt\n", "3588 M09230_2.00.txt\n", "3589 M08028_2.00.txt\n", "3590 M05336_2.00.txt\n", "3591 M07674_2.00.txt\n", "3592 M04504_2.00.txt\n", "3593 M03326_2.00.txt\n", "3594 M04786_2.00.txt\n", "3595 M07606_2.00.txt\n", "3596 M05636_2.00.txt\n", "3597 M09543_2.00.txt\n", "3598 M03295_2.00.txt\n", "3599 M07696_2.00.txt\n", "3600 M00321_2.00.txt\n", "3601 M08301_2.00.txt\n", "3602 M07793_2.00.txt\n", "3603 M05468_2.00.txt\n", "3604 M03385_2.00.txt\n", "3605 M03037_2.00.txt\n", "3606 M04256_2.00.txt\n", "3607 M08018_2.00.txt\n", "3608 M05669_2.00.txt\n", "3609 M05742_2.00.txt\n", "3610 M04162_2.00.txt\n", "3611 M02086_2.00.txt\n", "3612 M04080_2.00.txt\n", "3613 M07707_2.00.txt\n", "3614 M08931_2.00.txt\n", "3615 M04903_2.00.txt\n", "3616 M05728_2.00.txt\n", "3617 M05330_2.00.txt\n", "3618 M07871_2.00.txt\n", "3619 M07874_2.00.txt\n", "3620 M03328_2.00.txt\n", "3621 M04629_2.00.txt\n", "3622 M05229_2.00.txt\n", "3623 M08237_2.00.txt\n", "3624 M02930_2.00.txt\n", "3625 M03379_2.00.txt\n", "3626 M04302_2.00.txt\n", "3627 M05281_2.00.txt\n", "3628 M07700_2.00.txt\n", "3629 M04321_2.00.txt\n", "3630 M07583_2.00.txt\n", "3631 M05326_2.00.txt\n", "3632 M04139_2.00.txt\n", "3633 M04124_2.00.txt\n", "3634 M03392_2.00.txt\n", "3635 M03412_2.00.txt\n", "3636 M04649_2.00.txt\n", "3637 M05048_2.00.txt\n", "3638 M07856_2.00.txt\n", "3639 M04278_2.00.txt\n", "3640 M05047_2.00.txt\n", "3641 M03546_2.00.txt\n", "3642 M07882_2.00.txt\n", "3643 M04089_2.00.txt\n", "3644 M03100_2.00.txt\n", "3645 M04037_2.00.txt\n", "3646 M02828_2.00.txt\n", "3647 M00839_2.00.txt\n", "3648 M05241_2.00.txt\n", "3649 M04784_2.00.txt\n", "3650 M04183_2.00.txt\n", "3651 M08960_2.00.txt\n", "3652 M05766_2.00.txt\n", "3653 M07982_2.00.txt\n", "3654 M02909_2.00.txt\n", "3655 M05249_2.00.txt\n", "3656 M08299_2.00.txt\n", "3657 M04628_2.00.txt\n", "3658 M07593_2.00.txt\n", "3659 M04465_2.00.txt\n", "3660 M05029_2.00.txt\n", "3661 M04288_2.00.txt\n", "3662 M04778_2.00.txt\n", "3663 M05151_2.00.txt\n", "3664 M07918_2.00.txt\n", "3665 M04881_2.00.txt\n", "3666 M05895_2.00.txt\n", "Motif M05895_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3667 M02776_2.00.txt\n", "3668 M05698_2.00.txt\n", "3669 M04846_2.00.txt\n", "3670 M05032_2.00.txt\n", "3671 M05378_2.00.txt\n", "3672 M05842_2.00.txt\n", "Motif M05842_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3673 M07938_2.00.txt\n", "3674 M03475_2.00.txt\n", "3675 M05290_2.00.txt\n", "3676 M02753_2.00.txt\n", "3677 M07931_2.00.txt\n", "3678 M03108_2.00.txt\n", "3679 M05251_2.00.txt\n", "3680 M05874_2.00.txt\n", "Motif M05874_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3681 M07589_2.00.txt\n", "3682 M07717_2.00.txt\n", "3683 M07933_2.00.txt\n", "3684 M03001_2.00.txt\n", "3685 M05030_2.00.txt\n", "3686 M05022_2.00.txt\n", "3687 M05553_2.00.txt\n", "3688 M05518_2.00.txt\n", "3689 M03003_2.00.txt\n", "3690 M05631_2.00.txt\n", "3691 M09057_2.00.txt\n", "3692 M08152_2.00.txt\n", "3693 M00328_2.00.txt\n", "3694 M02826_2.00.txt\n", "3695 M04310_2.00.txt\n", "3696 M08383_2.00.txt\n", "3697 M04045_2.00.txt\n", "3698 M04999_2.00.txt\n", "3699 M01510_2.00.txt\n", "3700 M08949_2.00.txt\n", "3701 M04271_2.00.txt\n", "3702 M03096_2.00.txt\n", "3703 M04767_2.00.txt\n", "3704 M04967_2.00.txt\n", "3705 M05439_2.00.txt\n", "3706 M00739_2.00.txt\n", "3707 M05306_2.00.txt\n", "3708 M02875_2.00.txt\n", "3709 M02925_2.00.txt\n", "3710 M03369_2.00.txt\n", "3711 M04962_2.00.txt\n", "3712 M03382_2.00.txt\n", "3713 M04625_2.00.txt\n", "3714 M05133_2.00.txt\n", "3715 M02832_2.00.txt\n", "3716 M03352_2.00.txt\n", "3717 M09380_2.00.txt\n", "3718 M02847_2.00.txt\n", "3719 M05289_2.00.txt\n", "3720 M03925_2.00.txt\n", "3721 M04873_2.00.txt\n", "3722 M02744_2.00.txt\n", "3723 M04052_2.00.txt\n", "3724 M07591_2.00.txt\n", "3725 M05690_2.00.txt\n", "3726 M05666_2.00.txt\n", "3727 M05261_2.00.txt\n", "3728 M02841_2.00.txt\n", "3729 M01008_2.00.txt\n", "3730 M05583_2.00.txt\n", "3731 M00310_2.00.txt\n", "3732 M07551_2.00.txt\n", "3733 M04182_2.00.txt\n", "3734 M02955_2.00.txt\n", "3735 M07703_2.00.txt\n", "3736 M00291_2.00.txt\n", "3737 M05153_2.00.txt\n", "3738 M03238_2.00.txt\n", "3739 M08861_2.00.txt\n" ] }, { "name": "stdout", "output_type": "stream", "text": [ "3740 M05019_2.00.txt\n", "3741 M08341_2.00.txt\n", "3742 M02460_2.00.txt\n", "3743 M04567_2.00.txt\n", "3744 M00251_2.00.txt\n", "3745 M03360_2.00.txt\n", "3746 M07691_2.00.txt\n", "3747 M07721_2.00.txt\n", "3748 M00285_2.00.txt\n", "3749 M04337_2.00.txt\n", "3750 M04676_2.00.txt\n", "3751 M02843_2.00.txt\n", "3752 M05499_2.00.txt\n", "3753 M02840_2.00.txt\n", "3754 M02787_2.00.txt\n", "3755 M07849_2.00.txt\n", "3756 M02756_2.00.txt\n", "3757 M08399_2.00.txt\n", "3758 M05393_2.00.txt\n", "3759 M01512_2.00.txt\n", "3760 M09440_2.00.txt\n", "3761 M08140_2.00.txt\n", "3762 M04144_2.00.txt\n", "3763 M05565_2.00.txt\n", "3764 M04565_2.00.txt\n", "3765 M07951_2.00.txt\n", "3766 M08181_2.00.txt\n", "3767 M04091_2.00.txt\n", "3768 M03006_2.00.txt\n", "3769 M02083_2.00.txt\n", "3770 M09266_2.00.txt\n", "3771 M07826_2.00.txt\n", "3772 M04656_2.00.txt\n", "3773 M03575_2.00.txt\n", "3774 M04525_2.00.txt\n", "3775 M05747_2.00.txt\n", "3776 M07756_2.00.txt\n", "3777 M02733_2.00.txt\n", "3778 M05433_2.00.txt\n", "3779 M05201_2.00.txt\n", "3780 M05450_2.00.txt\n", "3781 M04152_2.00.txt\n", "3782 M02857_2.00.txt\n", "3783 M08375_2.00.txt\n", "3784 M09247_2.00.txt\n", "3785 M00273_2.00.txt\n", "3786 M05521_2.00.txt\n", "3787 M05720_2.00.txt\n", "3788 M02856_2.00.txt\n", "3789 M07992_2.00.txt\n", "3790 M05506_2.00.txt\n", "3791 M04851_2.00.txt\n", "3792 M05205_2.00.txt\n", "3793 M08358_2.00.txt\n", "3794 M04510_2.00.txt\n", "3795 M04266_2.00.txt\n", "3796 M04071_2.00.txt\n", "3797 M04963_2.00.txt\n", "3798 M07731_2.00.txt\n", "3799 M05825_2.00.txt\n", "3800 M08247_2.00.txt\n", "3801 M04696_2.00.txt\n", "3802 M05373_2.00.txt\n", "3803 M07652_2.00.txt\n", "3804 M08856_2.00.txt\n", "3805 M05703_2.00.txt\n", "3806 M08395_2.00.txt\n", "3807 M07868_2.00.txt\n", "3808 M03342_2.00.txt\n", "3809 M09600_2.00.txt\n", "3810 M04615_2.00.txt\n", "3811 M04451_2.00.txt\n", "3812 M09542_2.00.txt\n", "Motif M09542_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3813 M04519_2.00.txt\n", "3814 M02878_2.00.txt\n", "3815 M05497_2.00.txt\n", "3816 M04452_2.00.txt\n", "3817 M04429_2.00.txt\n", "3818 M05119_2.00.txt\n", "3819 M07827_2.00.txt\n", "3820 M04960_2.00.txt\n", "3821 M04971_2.00.txt\n", "3822 M02983_2.00.txt\n", "3823 M01505_2.00.txt\n", "3824 M08185_2.00.txt\n", "3825 M08353_2.00.txt\n", "3826 M09460_2.00.txt\n", "3827 M07714_2.00.txt\n", "3828 M05824_2.00.txt\n", "3829 M07602_2.00.txt\n", "3830 M05793_2.00.txt\n", "3831 M03523_2.00.txt\n", "3832 M05891_2.00.txt\n", "Motif M05891_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3833 M05498_2.00.txt\n", "3834 M02950_2.00.txt\n", "3835 M05830_2.00.txt\n", "3836 M05039_2.00.txt\n", "3837 M05638_2.00.txt\n", "3838 M08085_2.00.txt\n", "3839 M05524_2.00.txt\n", "3840 M05704_2.00.txt\n", "3841 M04777_2.00.txt\n", "3842 M05394_2.00.txt\n", "3843 M04966_2.00.txt\n", "3844 M08285_2.00.txt\n", "3845 M05299_2.00.txt\n", "3846 M08398_2.00.txt\n", "3847 M03415_2.00.txt\n", "3848 M05412_2.00.txt\n", "3849 M04579_2.00.txt\n", "3850 M04892_2.00.txt\n", "3851 M04536_2.00.txt\n", "3852 M05162_2.00.txt\n", "3853 M05380_2.00.txt\n", "3854 M09592_2.00.txt\n", "Motif M09592_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3855 M04030_2.00.txt\n", "3856 M09522_2.00.txt\n", "Motif M09522_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3857 M03215_2.00.txt\n", "3858 M09536_2.00.txt\n", "Motif M09536_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3859 M04912_2.00.txt\n", "3860 M08851_2.00.txt\n", "3861 M05756_2.00.txt\n", "3862 M07739_2.00.txt\n", "3863 M05467_2.00.txt\n", "3864 M08912_2.00.txt\n", "3865 M02844_2.00.txt\n", "3866 M04238_2.00.txt\n", "3867 M08887_2.00.txt\n", "3868 M05270_2.00.txt\n", "3869 M08087_2.00.txt\n", "3870 M07818_2.00.txt\n", "3871 M09560_2.00.txt\n", "Motif M09560_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3872 M03515_2.00.txt\n", "3873 M04470_2.00.txt\n", "3874 M01026_2.00.txt\n", "3875 M05017_2.00.txt\n", "3876 M04564_2.00.txt\n", "3877 M07935_2.00.txt\n", "3878 M02775_2.00.txt\n", "3879 M05831_2.00.txt\n", "Motif M05831_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3880 M05800_2.00.txt\n", "3881 M03243_2.00.txt\n", "3882 M02750_2.00.txt\n", "3883 M04874_2.00.txt\n", "3884 M05358_2.00.txt\n", "3885 M04990_2.00.txt\n", "3886 M05594_2.00.txt\n", "3887 M05419_2.00.txt\n", "3888 M05875_2.00.txt\n", "Motif M05875_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3889 M05815_2.00.txt\n", "3890 M08093_2.00.txt\n", "3891 M08945_2.00.txt\n", "3892 M04877_2.00.txt\n", "3893 M05896_2.00.txt\n", "Motif M05896_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3894 M02705_2.00.txt\n", "3895 M07929_2.00.txt\n", "3896 M05769_2.00.txt\n", "3897 M04371_2.00.txt\n", "3898 M05248_2.00.txt\n", "3899 M04951_2.00.txt\n", "3900 M04190_2.00.txt\n", "3901 M05659_2.00.txt\n", "3902 M05684_2.00.txt\n", "3903 M05319_2.00.txt\n", "3904 M05200_2.00.txt\n", "3905 M03502_2.00.txt\n", "3906 M07600_2.00.txt\n", "3907 M07673_2.00.txt\n", "3908 M04239_2.00.txt\n", "3909 M07808_2.00.txt\n", "3910 M04305_2.00.txt\n", "3911 M04563_2.00.txt\n", "3912 M05802_2.00.txt\n", "3913 M08119_2.00.txt\n", "3914 M09137_2.00.txt\n", "3915 M01977_2.00.txt\n", "3916 M05619_2.00.txt\n", "3917 M09051_2.00.txt\n", "3918 M03157_2.00.txt\n", "3919 M05840_2.00.txt\n", "Motif M05840_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3920 M08380_2.00.txt\n", "3921 M04920_2.00.txt\n", "3922 M08104_2.00.txt\n", "3923 M09272_2.00.txt\n", "3924 M03886_2.00.txt\n", "3925 M05059_2.00.txt\n", "3926 M08016_2.00.txt\n", "3927 M03407_2.00.txt\n", "3928 M07784_2.00.txt\n", "3929 M03176_2.00.txt\n", "3930 M03139_2.00.txt\n", "3931 M05852_2.00.txt\n", "3932 M01504_2.00.txt\n", "3933 M04587_2.00.txt\n", "3934 M07809_2.00.txt\n", "3935 M04761_2.00.txt\n", "3936 M04606_2.00.txt\n", "3937 M08807_2.00.txt\n", "3938 M07996_2.00.txt\n", "3939 M08736_2.00.txt\n", "3940 M01498_2.00.txt\n", "3941 M04360_2.00.txt\n", "3942 M07949_2.00.txt\n", "3943 M07839_2.00.txt\n", "3944 M03147_2.00.txt\n", "3945 M09561_2.00.txt\n", "3946 M02797_2.00.txt\n", "3947 M04677_2.00.txt\n", "3948 M03212_2.00.txt\n", "3949 M07921_2.00.txt\n", "3950 M07807_2.00.txt\n", "3951 M04607_2.00.txt\n", "3952 M02678_2.00.txt\n", "3953 M05740_2.00.txt\n", "3954 M04185_2.00.txt\n", "3955 M04944_2.00.txt\n", "3956 M05670_2.00.txt\n", "3957 M08282_2.00.txt\n", "3958 M02900_2.00.txt\n", "3959 M04390_2.00.txt\n", "3960 M00279_2.00.txt\n", "3961 M04583_2.00.txt\n", "3962 M05745_2.00.txt\n", "3963 M04875_2.00.txt\n", "3964 M04959_2.00.txt\n", "3965 M05749_2.00.txt\n", "3966 M02833_2.00.txt\n", "3967 M09485_2.00.txt\n", "Motif M09485_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3968 M08893_2.00.txt\n", "3969 M00227_2.00.txt\n", "3970 M00261_2.00.txt\n", "3971 M04655_2.00.txt\n", "3972 M03220_2.00.txt\n", "3973 M09386_2.00.txt\n", "3974 M07912_2.00.txt\n", "3975 M04605_2.00.txt\n", "3976 M05078_2.00.txt\n", "3977 M05897_2.00.txt\n", "Motif M05897_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3978 M05392_2.00.txt\n", "3979 M05654_2.00.txt\n", "3980 M03511_2.00.txt\n", "3981 M07604_2.00.txt\n", "3982 M04863_2.00.txt\n", "3983 M04644_2.00.txt\n", "3984 M02838_2.00.txt\n", "3985 M08345_2.00.txt\n", "3986 M02396_2.00.txt\n", "3987 M05477_2.00.txt\n", "3988 M08355_2.00.txt\n", "3989 M08360_2.00.txt\n", "3990 M04699_2.00.txt\n", "3991 M03174_2.00.txt\n", "3992 M04009_2.00.txt\n", "3993 M04619_2.00.txt\n", "3994 M03458_2.00.txt\n", "3995 M04578_2.00.txt\n", "3996 M04904_2.00.txt\n", "3997 M00987_2.00.txt\n", "3998 M04148_2.00.txt\n", "3999 M04011_2.00.txt\n", "4000 M04954_2.00.txt\n", "4001 M02924_2.00.txt\n", "4002 M08899_2.00.txt\n", "4003 M07806_2.00.txt\n", "4004 M05105_2.00.txt\n", "4005 M04490_2.00.txt\n", "4006 M04090_2.00.txt\n", "4007 M02663_2.00.txt\n", "4008 M03513_2.00.txt\n", "4009 M05086_2.00.txt\n", "4010 M07957_2.00.txt\n", "4011 M04982_2.00.txt\n", "4012 M04837_2.00.txt\n", "4013 M03396_2.00.txt\n", "4014 M04413_2.00.txt\n", "4015 M05064_2.00.txt\n", "4016 M05858_2.00.txt\n", "Motif M05858_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "4017 M04632_2.00.txt\n", "4018 M04544_2.00.txt\n", "4019 M04887_2.00.txt\n", "4020 M08722_2.00.txt\n", "4021 M07791_2.00.txt\n", "4022 M03494_2.00.txt\n", "4023 M03172_2.00.txt\n", "4024 M04950_2.00.txt\n", "4025 M03923_2.00.txt\n", "4026 M08952_2.00.txt\n", "4027 M08071_2.00.txt\n", "4028 M09604_2.00.txt\n", "Motif M09604_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "4029 M08942_2.00.txt\n", "4030 M05106_2.00.txt\n", "4031 M07927_2.00.txt\n", "4032 M03014_2.00.txt\n", "4033 M11491_2.00.txt\n", "4034 M00317_2.00.txt\n", "4035 M04275_2.00.txt\n", "4036 M04369_2.00.txt\n", "4037 M03071_2.00.txt\n", "4038 M07958_2.00.txt\n", "4039 M05723_2.00.txt\n", "4040 M04145_2.00.txt\n", "4041 M04814_2.00.txt\n", "4042 M00274_2.00.txt\n", "4043 M08125_2.00.txt\n", "4044 M07903_2.00.txt\n", "4045 M07930_2.00.txt\n", "4046 M00254_2.00.txt\n", "4047 M04650_2.00.txt\n", "4048 M03501_2.00.txt\n", "4049 M09229_2.00.txt\n", "4050 M05359_2.00.txt\n", "4051 M04514_2.00.txt\n", "4052 M02956_2.00.txt\n", "4053 M08142_2.00.txt\n", "4054 M04368_2.00.txt\n", "4055 M04738_2.00.txt\n", "4056 M04044_2.00.txt\n", "4057 M05686_2.00.txt\n", "4058 M05587_2.00.txt\n", "4059 M01927_2.00.txt\n", "4060 M04343_2.00.txt\n", "4061 M05711_2.00.txt\n", "4062 M04822_2.00.txt\n", "4063 M05011_2.00.txt\n", "4064 M04421_2.00.txt\n", "4065 M07638_2.00.txt\n", "4066 M07821_2.00.txt\n", "4067 M04468_2.00.txt\n", "4068 M04318_2.00.txt\n", "4069 M09454_2.00.txt\n", "4070 M03581_2.00.txt\n", "4071 M08858_2.00.txt\n", "4072 M05171_2.00.txt\n" ] }, { "name": "stdout", "output_type": "stream", "text": [ "4073 M05717_2.00.txt\n", "4074 M08228_2.00.txt\n", "4075 M04434_2.00.txt\n", "4076 M05130_2.00.txt\n", "4077 M04404_2.00.txt\n", "4078 M00247_2.00.txt\n", "4079 M03201_2.00.txt\n", "4080 M05775_2.00.txt\n", "4081 M04764_2.00.txt\n", "4082 M00305_2.00.txt\n", "4083 M02731_2.00.txt\n", "4084 M05313_2.00.txt\n", "4085 M04389_2.00.txt\n", "4086 M00237_2.00.txt\n", "4087 M03324_2.00.txt\n", "4088 M02954_2.00.txt\n", "4089 M03097_2.00.txt\n", "4090 M07798_2.00.txt\n", "4091 M05072_2.00.txt\n", "4092 M02822_2.00.txt\n", "4093 M08910_2.00.txt\n", "4094 M05211_2.00.txt\n", "4095 M09139_2.00.txt\n", "4096 M04397_2.00.txt\n", "4097 M05033_2.00.txt\n", "4098 M09033_2.00.txt\n", "4099 M05646_2.00.txt\n", "4100 M03397_2.00.txt\n", "4101 M05656_2.00.txt\n", "4102 M02727_2.00.txt\n", "4103 M01113_2.00.txt\n", "4104 M04353_2.00.txt\n", "4105 M00329_2.00.txt\n", "4106 M04594_2.00.txt\n", "4107 M04430_2.00.txt\n", "4108 M04109_2.00.txt\n", "4109 M04687_2.00.txt\n", "4110 M05424_2.00.txt\n", "4111 M03183_2.00.txt\n", "4112 M03184_2.00.txt\n", "4113 M03155_2.00.txt\n", "4114 M03573_2.00.txt\n", "4115 M04416_2.00.txt\n", "4116 M00240_2.00.txt\n", "4117 M09632_2.00.txt\n", "Motif M09632_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "4118 M04735_2.00.txt\n", "4119 M05490_2.00.txt\n", "4120 M04087_2.00.txt\n", "4121 M09349_2.00.txt\n", "4122 M05044_2.00.txt\n", "4123 M04943_2.00.txt\n", "4124 M09362_2.00.txt\n", "4125 M08883_2.00.txt\n" ] } ], "source": [ "cisbp_pwms_stats = cisbp_to_meme(pmws_cisbp_path=pwms_cisbp_path, motifs_selected=motifs_selected, outfile_path= os.path.join(project_rootdir, 'pwms_MEME/pwms_cisbp_meme.txt'))" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "## Problems met when scaling up to converting all PWMs from Cis-BP:\n", "The transfac files are present in the `pwms_all_motifs` directory, but they are empty, therefore they make the conversion crash. Example: `M10930_2.00.txt`. This is now taken care of with an additional filtering step.\n", "\n", "There are some PWMs where the rowsums do not sum up to 1 even within 1e-2 precision... Therefore, we keep track of the maximum error (that is the max value between rowsums subtracted from 1, the theoretical value of each rowsum).\n", "\n", "How bad is the problem ?" ] }, { "cell_type": "code", "execution_count": 207, "metadata": {}, "outputs": [ { "data": { "text/html": [ "
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motif_filenamemax_prob_error
2197M05847_2.00.txt0.200
3854M09592_2.00.txt0.003
3267M09621_2.00.txt0.003
3402M02645_2.00.txt0.002
1652M09521_2.00.txt0.002
430M05848_2.00.txt0.001
452M05883_2.00.txt0.001
3168M09642_2.00.txt0.001
3893M05896_2.00.txt0.001
2912M09529_2.00.txt0.001
\n", "
" ], "text/plain": [ " motif_filename max_prob_error\n", "2197 M05847_2.00.txt 0.200\n", "3854 M09592_2.00.txt 0.003\n", "3267 M09621_2.00.txt 0.003\n", "3402 M02645_2.00.txt 0.002\n", "1652 M09521_2.00.txt 0.002\n", "430 M05848_2.00.txt 0.001\n", "452 M05883_2.00.txt 0.001\n", "3168 M09642_2.00.txt 0.001\n", "3893 M05896_2.00.txt 0.001\n", "2912 M09529_2.00.txt 0.001" ] }, "execution_count": 207, "metadata": {}, "output_type": "execute_result" } ], "source": [ "cisbp_pwms_stats.sort_values(by='max_prob_error', ascending=False).head(10)" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "The largest error is 0.2, for motif `M05847_2.00.txt` for ZKCAN1, that is clearly an error due to some glitch in the computing of the motif PWM by the curators of Cis-BP. The corresponding site in the logo file is empty as well. We redo the analysis by excluding that motif." ] }, { "cell_type": "code", "execution_count": 208, "metadata": {}, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ "0 M04333_2.00.txt\n", "1 M09140_2.00.txt\n", "2 M03027_2.00.txt\n", "3 M03565_2.00.txt\n", "4 M04023_2.00.txt\n", "5 M04500_2.00.txt\n", "6 M07956_2.00.txt\n", "7 M09388_2.00.txt\n", "8 M00348_2.00.txt\n", "9 M03297_2.00.txt\n", "10 M03307_2.00.txt\n", "11 M09635_2.00.txt\n", "Motif M09635_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "12 M07642_2.00.txt\n", "13 M05887_2.00.txt\n", "Motif M05887_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "14 M00244_2.00.txt\n", "15 M02812_2.00.txt\n", "16 M04249_2.00.txt\n", "17 M04794_2.00.txt\n", "18 M00307_2.00.txt\n", "19 M05042_2.00.txt\n", "20 M07631_2.00.txt\n", "21 M08374_2.00.txt\n", "22 M04401_2.00.txt\n", "23 M00341_2.00.txt\n", "24 M04047_2.00.txt\n", "25 M07905_2.00.txt\n", "26 M07885_2.00.txt\n", "27 M08115_2.00.txt\n", "28 M05577_2.00.txt\n", "29 M03370_2.00.txt\n", "30 M00326_2.00.txt\n", "31 M08107_2.00.txt\n", "32 M02892_2.00.txt\n", "33 M08938_2.00.txt\n", "34 M04057_2.00.txt\n", "35 M04449_2.00.txt\n", "36 M01172_2.00.txt\n", "37 M05568_2.00.txt\n", "38 M05428_2.00.txt\n", "39 M04460_2.00.txt\n", "40 M04939_2.00.txt\n", "41 M08053_2.00.txt\n", "42 M05566_2.00.txt\n", "43 M04522_2.00.txt\n", "44 M08260_2.00.txt\n", "45 M08252_2.00.txt\n", "46 M05541_2.00.txt\n", "47 M00218_2.00.txt\n", "48 M05558_2.00.txt\n", "49 M07936_2.00.txt\n", "50 M02883_2.00.txt\n", "51 M00256_2.00.txt\n", "52 M05478_2.00.txt\n", "53 M05037_2.00.txt\n", "54 M05118_2.00.txt\n", "55 M03198_2.00.txt\n", "56 M05590_2.00.txt\n", "57 M09544_2.00.txt\n", "Motif M09544_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "58 M02896_2.00.txt\n", "59 M04477_2.00.txt\n", "60 M05213_2.00.txt\n", "61 M07848_2.00.txt\n", "62 M04911_2.00.txt\n", "63 M05216_2.00.txt\n", "64 M04940_2.00.txt\n", "65 M05811_2.00.txt\n", "66 M00370_2.00.txt\n", "67 M05790_2.00.txt\n", "68 M05189_2.00.txt\n", "69 M08317_2.00.txt\n", "70 M03358_2.00.txt\n", "71 M05475_2.00.txt\n", "72 M04626_2.00.txt\n", "73 M08289_2.00.txt\n", "74 M05645_2.00.txt\n", "75 M07948_2.00.txt\n", "76 M08933_2.00.txt\n", "77 M03525_2.00.txt\n", "78 M04608_2.00.txt\n", "79 M05694_2.00.txt\n", "80 M04855_2.00.txt\n", "81 M04991_2.00.txt\n", "82 M05187_2.00.txt\n", "83 M02809_2.00.txt\n", "84 M03344_2.00.txt\n", "85 M08801_2.00.txt\n", "86 M00290_2.00.txt\n", "87 M04251_2.00.txt\n", "88 M04314_2.00.txt\n", "89 M04497_2.00.txt\n", "90 M00342_2.00.txt\n", "91 M08391_2.00.txt\n", "92 M02948_2.00.txt\n", "93 M03038_2.00.txt\n", "94 M05015_2.00.txt\n", "95 M07738_2.00.txt\n", "96 M03530_2.00.txt\n", "97 M04526_2.00.txt\n", "98 M09414_2.00.txt\n", "99 M04617_2.00.txt\n", "100 M08258_2.00.txt\n", "101 M08909_2.00.txt\n", "102 M07777_2.00.txt\n", "103 M03066_2.00.txt\n", "104 M07635_2.00.txt\n", "105 M04641_2.00.txt\n", "106 M04831_2.00.txt\n", "107 M05141_2.00.txt\n", "108 M03406_2.00.txt\n", "109 M04521_2.00.txt\n", "110 M03137_2.00.txt\n", "111 M04538_2.00.txt\n", "112 M05739_2.00.txt\n", "113 M05308_2.00.txt\n", "114 M03073_2.00.txt\n", "115 M09284_2.00.txt\n", "116 M08008_2.00.txt\n", "117 M04613_2.00.txt\n", "118 M03098_2.00.txt\n", "119 M05697_2.00.txt\n", "120 M02918_2.00.txt\n", "121 M07983_2.00.txt\n", "122 M09444_2.00.txt\n", "123 M04272_2.00.txt\n", "124 M07552_2.00.txt\n", "125 M02941_2.00.txt\n", "126 M07852_2.00.txt\n", "127 M02837_2.00.txt\n", "128 M04758_2.00.txt\n", "129 M07698_2.00.txt\n", "130 M05460_2.00.txt\n", "131 M04476_2.00.txt\n", "132 M04235_2.00.txt\n", "133 M02914_2.00.txt\n", "134 M04858_2.00.txt\n", "135 M05525_2.00.txt\n", "136 M05406_2.00.txt\n", "137 M08276_2.00.txt\n", "138 M07991_2.00.txt\n", "139 M03142_2.00.txt\n", "140 M09528_2.00.txt\n", "141 M05253_2.00.txt\n", "142 M02743_2.00.txt\n", "143 M04994_2.00.txt\n", "144 M04713_2.00.txt\n", "145 M07693_2.00.txt\n", "146 M07601_2.00.txt\n", "147 M02986_2.00.txt\n", "148 M04008_2.00.txt\n", "149 M03512_2.00.txt\n", "150 M05070_2.00.txt\n", "151 M05604_2.00.txt\n", "152 M04611_2.00.txt\n", "153 M05621_2.00.txt\n", "154 M05764_2.00.txt\n", "155 M04049_2.00.txt\n", "156 M07753_2.00.txt\n", "157 M08730_2.00.txt\n", "158 M04101_2.00.txt\n", "159 M09507_2.00.txt\n", "160 M05109_2.00.txt\n", "161 M01306_2.00.txt\n", "162 M04997_2.00.txt\n", "163 M09487_2.00.txt\n", "164 M07963_2.00.txt\n", "165 M07581_2.00.txt\n", "166 M04209_2.00.txt\n", "167 M00239_2.00.txt\n", "168 M09155_2.00.txt\n", "169 M03116_2.00.txt\n", "170 M03456_2.00.txt\n", "171 M04380_2.00.txt\n", "172 M02538_2.00.txt\n", "173 M08959_2.00.txt\n", "174 M05376_2.00.txt\n", "175 M05653_2.00.txt\n", "176 M04845_2.00.txt\n", "177 M04108_2.00.txt\n", "178 M04205_2.00.txt\n", "179 M05204_2.00.txt\n", "180 M00353_2.00.txt\n", "181 M04481_2.00.txt\n", "182 M07940_2.00.txt\n", "183 M02898_2.00.txt\n", "184 M04437_2.00.txt\n", "185 M01227_2.00.txt\n", "186 M01007_2.00.txt\n", "187 M05693_2.00.txt\n", "188 M02752_2.00.txt\n", "189 M08238_2.00.txt\n", "190 M05520_2.00.txt\n", "191 M09220_2.00.txt\n", "192 M02987_2.00.txt\n", "193 M07861_2.00.txt\n", "194 M00986_2.00.txt\n", "195 M07916_2.00.txt\n", "196 M08288_2.00.txt\n", "197 M04382_2.00.txt\n", "198 M02981_2.00.txt\n", "199 M02997_2.00.txt\n", "200 M04588_2.00.txt\n", "201 M05453_2.00.txt\n", "202 M00318_2.00.txt\n", "203 M03086_2.00.txt\n", "204 M05266_2.00.txt\n", "205 M08932_2.00.txt\n", "206 M01929_2.00.txt\n", "207 M05484_2.00.txt\n", "208 M04897_2.00.txt\n", "209 M03228_2.00.txt\n", "210 M00304_2.00.txt\n", "211 M04228_2.00.txt\n", "212 M04898_2.00.txt\n", "213 M07901_2.00.txt\n", "214 M09056_2.00.txt\n", "215 M07647_2.00.txt\n", "216 M03459_2.00.txt\n", "217 M04399_2.00.txt\n", "218 M00323_2.00.txt\n", "219 M04491_2.00.txt\n", "220 M02884_2.00.txt\n", "221 M07997_2.00.txt\n", "222 M04180_2.00.txt\n", "223 M04765_2.00.txt\n", "224 M05235_2.00.txt\n", "225 M05415_2.00.txt\n", "226 M04921_2.00.txt\n", "227 M04925_2.00.txt\n", "228 M04313_2.00.txt\n", "229 M07872_2.00.txt\n", "230 M04659_2.00.txt\n", "231 M03476_2.00.txt\n", "232 M02977_2.00.txt\n", "233 M08010_2.00.txt\n", "234 M09062_2.00.txt\n", "235 M03464_2.00.txt\n", "236 M01497_2.00.txt\n", "237 M09413_2.00.txt\n", "238 M04351_2.00.txt\n", "239 M00275_2.00.txt\n", "240 M04791_2.00.txt\n", "241 M02757_2.00.txt\n", "242 M08150_2.00.txt\n", "243 M05108_2.00.txt\n", "244 M09350_2.00.txt\n", "245 M03175_2.00.txt\n", "246 M04499_2.00.txt\n", "247 M04196_2.00.txt\n", "248 M08230_2.00.txt\n", "249 M07711_2.00.txt\n", "250 M04051_2.00.txt\n", "251 M04444_2.00.txt\n", "252 M07678_2.00.txt\n", "253 M02397_2.00.txt\n", "254 M07779_2.00.txt\n", "255 M04766_2.00.txt\n", "256 M09053_2.00.txt\n", "257 M03084_2.00.txt\n", "258 M04222_2.00.txt\n", "259 M08926_2.00.txt\n", "260 M04616_2.00.txt\n", "261 M03520_2.00.txt\n", "262 M04092_2.00.txt\n", "263 M05167_2.00.txt\n", "264 M07620_2.00.txt\n", "265 M03168_2.00.txt\n", "266 M00243_2.00.txt\n", "267 M04326_2.00.txt\n", "268 M05813_2.00.txt\n", "269 M05268_2.00.txt\n", "270 M04149_2.00.txt\n", "271 M07857_2.00.txt\n", "272 M05244_2.00.txt\n", "273 M04170_2.00.txt\n", "274 M08246_2.00.txt\n", "275 M04436_2.00.txt\n", "276 M09134_2.00.txt\n", "277 M01913_2.00.txt\n", "278 M05208_2.00.txt\n", "279 M02085_2.00.txt\n", "280 M05774_2.00.txt\n", "281 M08369_2.00.txt\n", "282 M08796_2.00.txt\n", "283 M04590_2.00.txt\n", "284 M04349_2.00.txt\n", "285 M05089_2.00.txt\n", "286 M09425_2.00.txt\n", "287 M03479_2.00.txt\n", "288 M05287_2.00.txt\n", "289 M04405_2.00.txt\n", "290 M03070_2.00.txt\n", "291 M08177_2.00.txt\n", "292 M08702_2.00.txt\n", "293 M09141_2.00.txt\n", "294 M08740_2.00.txt\n", "295 M02689_2.00.txt\n", "296 M04576_2.00.txt\n", "297 M09289_2.00.txt\n", "298 M09369_2.00.txt\n", "299 M07783_2.00.txt\n", "300 M05417_2.00.txt\n", "301 M08351_2.00.txt\n", "302 M05734_2.00.txt\n", "303 M04129_2.00.txt\n", "304 M03402_2.00.txt\n", "305 M05635_2.00.txt\n", "306 M04978_2.00.txt\n", "307 M09280_2.00.txt\n", "308 M07910_2.00.txt\n", "309 M07755_2.00.txt\n", "310 M04639_2.00.txt\n", "311 M04189_2.00.txt\n", "312 M09379_2.00.txt\n", "313 M00316_2.00.txt\n", "314 M00308_2.00.txt\n", "315 M03134_2.00.txt\n", "316 M09371_2.00.txt\n", "317 M08312_2.00.txt\n", "318 M08266_2.00.txt\n", "319 M03144_2.00.txt\n", "320 M05067_2.00.txt\n", "321 M03192_2.00.txt\n", "322 M07687_2.00.txt\n", "323 M04115_2.00.txt\n", "324 M04690_2.00.txt\n", "325 M08080_2.00.txt\n", "326 M05354_2.00.txt\n", "327 M04307_2.00.txt\n", "328 M05000_2.00.txt\n", "329 M08907_2.00.txt\n", "330 M07592_2.00.txt\n", "331 M00322_2.00.txt\n", "332 M09630_2.00.txt\n", "Motif M09630_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "333 M04439_2.00.txt\n", "334 M04084_2.00.txt\n", "335 M05422_2.00.txt\n", "336 M08165_2.00.txt\n", "337 M05174_2.00.txt\n", "338 M05367_2.00.txt\n", "339 M04306_2.00.txt\n", "340 M07836_2.00.txt\n", "341 M08956_2.00.txt\n", "342 M04161_2.00.txt\n", "343 M07752_2.00.txt\n", "344 M04494_2.00.txt\n", "345 M04036_2.00.txt\n", "346 M08048_2.00.txt\n", "347 M08879_2.00.txt\n", "348 M04666_2.00.txt\n", "349 M03453_2.00.txt\n", "350 M05096_2.00.txt\n", "351 M04273_2.00.txt\n", "352 M04312_2.00.txt\n", "353 M08337_2.00.txt\n", "354 M08167_2.00.txt\n", "355 M03527_2.00.txt\n", "356 M04453_2.00.txt\n", "357 M05807_2.00.txt\n", "358 M00225_2.00.txt\n", "359 M02738_2.00.txt\n", "360 M05357_2.00.txt\n", "361 M05049_2.00.txt\n", "362 M03526_2.00.txt\n", "363 M00365_2.00.txt\n", "364 M04919_2.00.txt\n", "365 M05610_2.00.txt\n", "366 M02944_2.00.txt\n", "367 M03230_2.00.txt\n", "368 M05893_2.00.txt\n", "Motif M05893_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "369 M04896_2.00.txt\n", "370 M04819_2.00.txt\n", "371 M04194_2.00.txt\n", "372 M02823_2.00.txt\n", "373 M04128_2.00.txt\n", "374 M05783_2.00.txt\n", "375 M02851_2.00.txt\n", "376 M09292_2.00.txt\n", "377 M05361_2.00.txt\n", "378 M02783_2.00.txt\n", "379 M04201_2.00.txt\n", "380 M07728_2.00.txt\n", "381 M04328_2.00.txt\n", "382 M04850_2.00.txt\n", "383 M07811_2.00.txt\n", "384 M05706_2.00.txt\n", "385 M08892_2.00.txt\n", "386 M05116_2.00.txt\n", "387 M07726_2.00.txt\n", "388 M03127_2.00.txt\n", "389 M05459_2.00.txt\n", "390 M04771_2.00.txt\n", "391 M09344_2.00.txt\n", "392 M09533_2.00.txt\n", "393 M05849_2.00.txt\n", "394 M05650_2.00.txt\n", "395 M07639_2.00.txt\n", "396 M05797_2.00.txt\n", "397 M05364_2.00.txt\n", "398 M05058_2.00.txt\n", "399 M04058_2.00.txt\n" ] }, { "name": "stdout", "output_type": "stream", "text": [ "400 M04595_2.00.txt\n", "401 M08311_2.00.txt\n", "402 M03345_2.00.txt\n", "403 M08335_2.00.txt\n", "404 M04424_2.00.txt\n", "405 M07719_2.00.txt\n", "406 M02728_2.00.txt\n", "407 M02958_2.00.txt\n", "408 M04350_2.00.txt\n", "409 M04263_2.00.txt\n", "410 M05585_2.00.txt\n", "411 M00319_2.00.txt\n", "412 M04060_2.00.txt\n", "413 M02947_2.00.txt\n", "414 M09416_2.00.txt\n", "415 M05627_2.00.txt\n", "416 M04763_2.00.txt\n", "417 M07820_2.00.txt\n", "418 M08876_2.00.txt\n", "419 M05431_2.00.txt\n", "420 M04847_2.00.txt\n", "421 M09378_2.00.txt\n", "422 M05127_2.00.txt\n", "423 M03467_2.00.txt\n", "424 M03883_2.00.txt\n", "425 M04901_2.00.txt\n", "426 M08401_2.00.txt\n", "427 M05113_2.00.txt\n", "428 M05491_2.00.txt\n", "429 M08239_2.00.txt\n", "430 M05848_2.00.txt\n", "Motif M05848_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "431 M05399_2.00.txt\n", "432 M03437_2.00.txt\n", "433 M05095_2.00.txt\n", "434 M04200_2.00.txt\n", "435 M05222_2.00.txt\n", "436 M03048_2.00.txt\n", "437 M09144_2.00.txt\n", "438 M04789_2.00.txt\n", "439 M04756_2.00.txt\n", "440 M03128_2.00.txt\n", "441 M08255_2.00.txt\n", "442 M08319_2.00.txt\n", "443 M05609_2.00.txt\n", "444 M07623_2.00.txt\n", "445 M07894_2.00.txt\n", "446 M05426_2.00.txt\n", "447 M03092_2.00.txt\n", "448 M02928_2.00.txt\n", "449 M07944_2.00.txt\n", "450 M03355_2.00.txt\n", "451 M04532_2.00.txt\n", "452 M05883_2.00.txt\n", "Motif M05883_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "453 M08738_2.00.txt\n", "454 M08389_2.00.txt\n", "455 M04455_2.00.txt\n", "456 M08376_2.00.txt\n", "457 M08221_2.00.txt\n", "458 M07975_2.00.txt\n", "459 M00838_2.00.txt\n", "460 M04609_2.00.txt\n", "461 M07841_2.00.txt\n", "462 M08235_2.00.txt\n", "463 M08212_2.00.txt\n", "464 M05100_2.00.txt\n", "465 M04065_2.00.txt\n", "466 M07866_2.00.txt\n", "467 M05755_2.00.txt\n", "468 M05128_2.00.txt\n", "469 M04335_2.00.txt\n", "470 M04749_2.00.txt\n", "471 M05735_2.00.txt\n", "472 M03448_2.00.txt\n", "473 M08223_2.00.txt\n", "474 M09095_2.00.txt\n", "475 M02849_2.00.txt\n", "476 M05737_2.00.txt\n", "477 M03150_2.00.txt\n", "478 M08381_2.00.txt\n", "479 M03101_2.00.txt\n", "480 M03510_2.00.txt\n", "481 M02919_2.00.txt\n", "482 M07732_2.00.txt\n", "483 M03131_2.00.txt\n", "484 M02807_2.00.txt\n", "485 M07663_2.00.txt\n", "486 M03186_2.00.txt\n", "487 M02980_2.00.txt\n", "488 M08131_2.00.txt\n", "489 M04852_2.00.txt\n", "490 M03202_2.00.txt\n", "491 M05550_2.00.txt\n", "492 M09283_2.00.txt\n", "493 M02872_2.00.txt\n", "494 M03490_2.00.txt\n", "495 M02994_2.00.txt\n", "496 M05154_2.00.txt\n", "497 M04729_2.00.txt\n", "498 M05069_2.00.txt\n", "499 M09370_2.00.txt\n", "500 M08877_2.00.txt\n", "501 M04352_2.00.txt\n", "502 M00303_2.00.txt\n", "503 M04906_2.00.txt\n", "504 M02749_2.00.txt\n", "505 M03450_2.00.txt\n", "506 M07772_2.00.txt\n", "507 M04207_2.00.txt\n", "508 M05068_2.00.txt\n", "509 M09439_2.00.txt\n", "510 M08904_2.00.txt\n", "511 M03386_2.00.txt\n", "512 M00270_2.00.txt\n", "513 M03075_2.00.txt\n", "514 M07744_2.00.txt\n", "515 M09218_2.00.txt\n", "516 M07725_2.00.txt\n", "517 M03484_2.00.txt\n", "518 M03338_2.00.txt\n", "519 M04146_2.00.txt\n", "520 M03486_2.00.txt\n", "521 M07747_2.00.txt\n", "522 M09092_2.00.txt\n", "523 M05416_2.00.txt\n", "524 M03483_2.00.txt\n", "525 M05404_2.00.txt\n", "526 M09035_2.00.txt\n", "527 M04637_2.00.txt\n", "528 M05692_2.00.txt\n", "529 M02971_2.00.txt\n", "530 M02939_2.00.txt\n", "531 M05729_2.00.txt\n", "532 M03390_2.00.txt\n", "533 M03381_2.00.txt\n", "534 M08888_2.00.txt\n", "535 M03374_2.00.txt\n", "536 M04276_2.00.txt\n", "537 M05143_2.00.txt\n", "538 M05115_2.00.txt\n", "539 M02916_2.00.txt\n", "540 M00226_2.00.txt\n", "541 M04540_2.00.txt\n", "542 M04489_2.00.txt\n", "543 M04410_2.00.txt\n", "544 M08052_2.00.txt\n", "545 M00272_2.00.txt\n", "546 M04294_2.00.txt\n", "547 M08251_2.00.txt\n", "548 M03444_2.00.txt\n", "549 M07659_2.00.txt\n", "550 M07622_2.00.txt\n", "551 M08313_2.00.txt\n", "552 M03040_2.00.txt\n", "553 M09154_2.00.txt\n", "554 M05159_2.00.txt\n", "555 M05536_2.00.txt\n", "556 M00336_2.00.txt\n", "557 M08950_2.00.txt\n", "558 M04515_2.00.txt\n", "559 M03455_2.00.txt\n", "560 M08954_2.00.txt\n", "561 M04062_2.00.txt\n", "562 M04652_2.00.txt\n", "563 M05623_2.00.txt\n", "564 M05062_2.00.txt\n", "565 M05132_2.00.txt\n", "566 M03329_2.00.txt\n", "567 M03112_2.00.txt\n", "568 M05485_2.00.txt\n", "569 M00292_2.00.txt\n", "570 M04598_2.00.txt\n", "571 M03321_2.00.txt\n", "572 M04234_2.00.txt\n", "573 M05845_2.00.txt\n", "Motif M05845_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "574 M04274_2.00.txt\n", "575 M02084_2.00.txt\n", "576 M08090_2.00.txt\n", "577 M03296_2.00.txt\n", "578 M08332_2.00.txt\n", "579 M03401_2.00.txt\n", "580 M05691_2.00.txt\n", "581 M05182_2.00.txt\n", "582 M03301_2.00.txt\n", "583 M08020_2.00.txt\n", "584 M04098_2.00.txt\n", "585 M08794_2.00.txt\n", "586 M09233_2.00.txt\n", "587 M08257_2.00.txt\n", "588 M05869_2.00.txt\n", "Motif M05869_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "589 M05082_2.00.txt\n", "590 M05876_2.00.txt\n", "Motif M05876_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "591 M05328_2.00.txt\n", "592 M04827_2.00.txt\n", "593 M05311_2.00.txt\n", "594 M04184_2.00.txt\n", "595 M04571_2.00.txt\n", "596 M04973_2.00.txt\n", "597 M03044_2.00.txt\n", "598 M05504_2.00.txt\n", "599 M03562_2.00.txt\n", "600 M04718_2.00.txt\n", "601 M05352_2.00.txt\n", "602 M05197_2.00.txt\n", "603 M07932_2.00.txt\n", "604 M03146_2.00.txt\n", "605 M04663_2.00.txt\n", "606 M05677_2.00.txt\n", "607 M07577_2.00.txt\n", "608 M04936_2.00.txt\n", "609 M05750_2.00.txt\n", "610 M04634_2.00.txt\n", "611 M02850_2.00.txt\n", "612 M02957_2.00.txt\n", "613 M04425_2.00.txt\n", "614 M05772_2.00.txt\n", "615 M09296_2.00.txt\n", "616 M03313_2.00.txt\n", "617 M08309_2.00.txt\n", "618 M04157_2.00.txt\n", "619 M09346_2.00.txt\n", "620 M05040_2.00.txt\n", "621 M03579_2.00.txt\n", "622 M00741_2.00.txt\n", "623 M04893_2.00.txt\n", "624 M04227_2.00.txt\n", "625 M00295_2.00.txt\n", "626 M03377_2.00.txt\n", "627 M04843_2.00.txt\n", "628 M04857_2.00.txt\n", "629 M03167_2.00.txt\n", "630 M08290_2.00.txt\n", "631 M08116_2.00.txt\n", "632 M05161_2.00.txt\n", "633 M00327_2.00.txt\n", "634 M05003_2.00.txt\n", "635 M04869_2.00.txt\n", "636 M02089_2.00.txt\n", "637 M00742_2.00.txt\n", "638 M04809_2.00.txt\n", "639 M03004_2.00.txt\n", "640 M03203_2.00.txt\n", "641 M03153_2.00.txt\n", "642 M05713_2.00.txt\n", "643 M02090_2.00.txt\n", "644 M05464_2.00.txt\n", "645 M04440_2.00.txt\n", "646 M03522_2.00.txt\n", "647 M05083_2.00.txt\n", "648 M07624_2.00.txt\n", "649 M08095_2.00.txt\n", "650 M08011_2.00.txt\n", "651 M07668_2.00.txt\n", "652 M03411_2.00.txt\n", "653 M07618_2.00.txt\n", "654 M03568_2.00.txt\n", "655 M08232_2.00.txt\n", "656 M02876_2.00.txt\n", "657 M04356_2.00.txt\n", "658 M07876_2.00.txt\n", "659 M01272_2.00.txt\n", "660 M04529_2.00.txt\n", "661 M04093_2.00.txt\n", "662 M03188_2.00.txt\n", "663 M03491_2.00.txt\n", "664 M05854_2.00.txt\n", "665 M04853_2.00.txt\n", "666 M07735_2.00.txt\n", "667 M08303_2.00.txt\n", "668 M04373_2.00.txt\n", "669 M04072_2.00.txt\n", "670 M04705_2.00.txt\n", "671 M04014_2.00.txt\n", "672 M02998_2.00.txt\n", "673 M04975_2.00.txt\n", "674 M03064_2.00.txt\n", "675 M04788_2.00.txt\n", "676 M04379_2.00.txt\n", "677 M05275_2.00.txt\n", "678 M05507_2.00.txt\n", "679 M08714_2.00.txt\n", "680 M07665_2.00.txt\n", "681 M07570_2.00.txt\n", "682 M07648_2.00.txt\n", "683 M04104_2.00.txt\n", "684 M05272_2.00.txt\n", "685 M08305_2.00.txt\n", "686 M04805_2.00.txt\n", "687 M04992_2.00.txt\n", "688 M07870_2.00.txt\n", "689 M05655_2.00.txt\n", "690 M07675_2.00.txt\n", "691 M04793_2.00.txt\n", "692 M04291_2.00.txt\n", "693 M07947_2.00.txt\n", "694 M04824_2.00.txt\n", "695 M04066_2.00.txt\n", "696 M05331_2.00.txt\n", "697 M08058_2.00.txt\n", "698 M05025_2.00.txt\n", "699 M05839_2.00.txt\n", "Motif M05839_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "700 M04454_2.00.txt\n", "701 M04516_2.00.txt\n", "702 M05572_2.00.txt\n", "703 M05294_2.00.txt\n", "704 M05725_2.00.txt\n", "705 M08286_2.00.txt\n", "706 M08390_2.00.txt\n", "707 M04099_2.00.txt\n", "708 M09377_2.00.txt\n", "709 M05538_2.00.txt\n", "710 M05315_2.00.txt\n", "711 M05712_2.00.txt\n", "712 M05596_2.00.txt\n", "713 M02912_2.00.txt\n", "714 M04517_2.00.txt\n", "715 M05716_2.00.txt\n", "716 M09288_2.00.txt\n", "717 M08086_2.00.txt\n", "718 M05881_2.00.txt\n", "Motif M05881_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "719 M04672_2.00.txt\n", "720 M08287_2.00.txt\n", "721 M03347_2.00.txt\n", "722 M04398_2.00.txt\n", "723 M07833_2.00.txt\n", "724 M04320_2.00.txt\n", "725 M03470_2.00.txt\n", "726 M03457_2.00.txt\n", "727 M04733_2.00.txt\n", "728 M08797_2.00.txt\n", "729 M09091_2.00.txt\n", "730 M04620_2.00.txt\n", "731 M04838_2.00.txt\n", "732 M05602_2.00.txt\n", "733 M05649_2.00.txt\n", "734 M04327_2.00.txt\n", "735 M04458_2.00.txt\n", "736 M02859_2.00.txt\n", "737 M04268_2.00.txt\n", "738 M05258_2.00.txt\n", "739 M05664_2.00.txt\n", "740 M05701_2.00.txt\n", "741 M04658_2.00.txt\n", "742 M02920_2.00.txt\n", "743 M09089_2.00.txt\n", "744 M04553_2.00.txt\n", "745 M08719_2.00.txt\n", "746 M09426_2.00.txt\n", "747 M08322_2.00.txt\n", "748 M09276_2.00.txt\n", "749 M05164_2.00.txt\n", "750 M04601_2.00.txt\n", "751 M08790_2.00.txt\n", "752 M04253_2.00.txt\n", "753 M05569_2.00.txt\n", "754 M05878_2.00.txt\n", "Motif M05878_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "755 M00281_2.00.txt\n", "756 M03214_2.00.txt\n", "757 M07999_2.00.txt\n", "758 M00301_2.00.txt\n", "759 M01501_2.00.txt\n", "760 M00366_2.00.txt\n", "761 M05139_2.00.txt\n", "762 M07654_2.00.txt\n", "763 M08327_2.00.txt\n", "764 M07937_2.00.txt\n", "765 M05857_2.00.txt\n", "766 M03293_2.00.txt\n", "767 M02889_2.00.txt\n", "768 M00297_2.00.txt\n", "769 M04744_2.00.txt\n", "770 M05517_2.00.txt\n", "771 M09607_2.00.txt\n", "Motif M09607_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "772 M04315_2.00.txt\n", "773 M03451_2.00.txt\n", "774 M02778_2.00.txt\n", "775 M09609_2.00.txt\n", "Motif M09609_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "776 M09396_2.00.txt\n", "777 M05660_2.00.txt\n", "778 M05758_2.00.txt\n", "779 M05809_2.00.txt\n", "780 M07770_2.00.txt\n", "781 M04684_2.00.txt\n", "782 M09248_2.00.txt\n", "783 M03552_2.00.txt\n", "784 M08192_2.00.txt\n", "785 M04216_2.00.txt\n", "786 M02680_2.00.txt\n", "787 M03372_2.00.txt\n", "788 M09345_2.00.txt\n", "789 M03517_2.00.txt\n", "790 M08256_2.00.txt\n", "791 M05671_2.00.txt\n", "792 M04600_2.00.txt\n", "793 M09335_2.00.txt\n", "794 M04107_2.00.txt\n", "795 M05099_2.00.txt\n", "796 M05866_2.00.txt\n", "Motif M05866_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "797 M03077_2.00.txt\n", "798 M02717_2.00.txt\n", "799 M08370_2.00.txt\n", "800 M07939_2.00.txt\n", "801 M00333_2.00.txt\n" ] }, { "name": "stdout", "output_type": "stream", "text": [ "802 M07760_2.00.txt\n", "803 M02748_2.00.txt\n", "804 M04823_2.00.txt\n", "805 M04714_2.00.txt\n", "806 M08184_2.00.txt\n", "807 M05672_2.00.txt\n", "808 M03031_2.00.txt\n", "809 M05819_2.00.txt\n", "810 M09595_2.00.txt\n", "Motif M09595_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "811 M04243_2.00.txt\n", "812 M04821_2.00.txt\n", "813 M08340_2.00.txt\n", "814 M05447_2.00.txt\n", "815 M08068_2.00.txt\n", "816 M08220_2.00.txt\n", "817 M08331_2.00.txt\n", "818 M05836_2.00.txt\n", "Motif M05836_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "819 M03093_2.00.txt\n", "820 M03331_2.00.txt\n", "821 M08720_2.00.txt\n", "822 M05144_2.00.txt\n", "823 M05434_2.00.txt\n", "824 M04882_2.00.txt\n", "825 M02658_2.00.txt\n", "826 M03465_2.00.txt\n", "827 M03518_2.00.txt\n", "828 M03335_2.00.txt\n", "829 M04543_2.00.txt\n", "830 M09391_2.00.txt\n", "831 M04496_2.00.txt\n", "832 M04654_2.00.txt\n", "833 M09523_2.00.txt\n", "834 M00358_2.00.txt\n", "835 M05571_2.00.txt\n", "836 M05661_2.00.txt\n", "837 M04492_2.00.txt\n", "838 M05430_2.00.txt\n", "839 M04237_2.00.txt\n", "840 M04640_2.00.txt\n", "841 M00984_2.00.txt\n", "842 M08781_2.00.txt\n", "843 M02449_2.00.txt\n", "844 M09504_2.00.txt\n", "Motif M09504_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "845 M04509_2.00.txt\n", "846 M08735_2.00.txt\n", "847 M04527_2.00.txt\n", "848 M05892_2.00.txt\n", "Motif M05892_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "849 M04396_2.00.txt\n", "850 M04645_2.00.txt\n", "851 M04582_2.00.txt\n", "852 M05687_2.00.txt\n", "853 M04111_2.00.txt\n", "854 M04697_2.00.txt\n", "855 M07565_2.00.txt\n", "856 M03218_2.00.txt\n", "857 M07764_2.00.txt\n", "858 M00287_2.00.txt\n", "859 M07795_2.00.txt\n", "860 M09083_2.00.txt\n", "861 M00242_2.00.txt\n", "862 M05183_2.00.txt\n", "863 M05055_2.00.txt\n", "864 M02093_2.00.txt\n", "865 M07969_2.00.txt\n", "866 M05757_2.00.txt\n", "867 M02792_2.00.txt\n", "868 M08917_2.00.txt\n", "869 M09294_2.00.txt\n", "870 M07934_2.00.txt\n", "871 M03187_2.00.txt\n", "872 M08320_2.00.txt\n", "873 M03547_2.00.txt\n", "874 M05515_2.00.txt\n", "875 M07653_2.00.txt\n", "876 M09270_2.00.txt\n", "877 M07585_2.00.txt\n", "878 M03414_2.00.txt\n", "879 M05598_2.00.txt\n", "880 M04854_2.00.txt\n", "881 M05023_2.00.txt\n", "882 M05356_2.00.txt\n", "883 M04423_2.00.txt\n", "884 M04178_2.00.txt\n", "885 M04706_2.00.txt\n", "886 M03072_2.00.txt\n", "887 M05479_2.00.txt\n", "888 M04812_2.00.txt\n", "889 M04173_2.00.txt\n", "890 M00938_2.00.txt\n", "891 M00324_2.00.txt\n", "892 M02824_2.00.txt\n", "893 M05683_2.00.txt\n", "894 M07812_2.00.txt\n", "895 M04985_2.00.txt\n", "896 M03138_2.00.txt\n", "897 M04116_2.00.txt\n", "898 M03507_2.00.txt\n", "899 M05398_2.00.txt\n", "900 M04803_2.00.txt\n", "901 M03316_2.00.txt\n", "902 M02735_2.00.txt\n", "903 M00222_2.00.txt\n", "904 M09503_2.00.txt\n", "Motif M09503_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "905 M04257_2.00.txt\n", "906 M01506_2.00.txt\n", "907 M02088_2.00.txt\n", "908 M03119_2.00.txt\n", "909 M03506_2.00.txt\n", "910 M09286_2.00.txt\n", "911 M08382_2.00.txt\n", "912 M04703_2.00.txt\n", "913 M04815_2.00.txt\n", "914 M05012_2.00.txt\n", "915 M09162_2.00.txt\n", "916 M05323_2.00.txt\n", "917 M03105_2.00.txt\n", "918 M03122_2.00.txt\n", "919 M08894_2.00.txt\n", "920 M09020_2.00.txt\n", "921 M03129_2.00.txt\n", "922 M04709_2.00.txt\n", "923 M04820_2.00.txt\n", "924 M04338_2.00.txt\n", "925 M05445_2.00.txt\n", "926 M09457_2.00.txt\n", "927 M00234_2.00.txt\n", "928 M05084_2.00.txt\n", "929 M08869_2.00.txt\n", "930 M07965_2.00.txt\n", "931 M00368_2.00.txt\n", "932 M05021_2.00.txt\n", "933 M04448_2.00.txt\n", "934 M04245_2.00.txt\n", "935 M03332_2.00.txt\n", "936 M03489_2.00.txt\n", "937 M00363_2.00.txt\n", "938 M08726_2.00.txt\n", "939 M03558_2.00.txt\n", "940 M09622_2.00.txt\n", "Motif M09622_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "941 M04840_2.00.txt\n", "942 M03363_2.00.txt\n", "943 M03572_2.00.txt\n", "944 M08733_2.00.txt\n", "945 M05579_2.00.txt\n", "946 M09164_2.00.txt\n", "947 M00340_2.00.txt\n", "948 M04651_2.00.txt\n", "949 M03216_2.00.txt\n", "950 M09052_2.00.txt\n", "951 M04019_2.00.txt\n", "952 M05043_2.00.txt\n", "953 M08316_2.00.txt\n", "954 M02813_2.00.txt\n", "955 M01500_2.00.txt\n", "956 M07962_2.00.txt\n", "957 M04602_2.00.txt\n", "958 M05529_2.00.txt\n", "959 M05077_2.00.txt\n", "960 M02848_2.00.txt\n", "961 M05730_2.00.txt\n", "962 M04063_2.00.txt\n", "963 M04746_2.00.txt\n", "964 M09291_2.00.txt\n", "965 M04848_2.00.txt\n", "966 M04141_2.00.txt\n", "967 M08721_2.00.txt\n", "968 M04132_2.00.txt\n", "969 M01961_2.00.txt\n", "970 M07859_2.00.txt\n", "971 M07778_2.00.txt\n", "972 M08130_2.00.txt\n", "973 M09395_2.00.txt\n", "974 M04933_2.00.txt\n", "975 M07881_2.00.txt\n", "976 M04226_2.00.txt\n", "977 M09285_2.00.txt\n", "978 M04957_2.00.txt\n", "979 M04928_2.00.txt\n", "980 M05103_2.00.txt\n", "981 M08268_2.00.txt\n", "982 M02806_2.00.txt\n", "983 M04064_2.00.txt\n", "984 M04366_2.00.txt\n", "985 M04755_2.00.txt\n", "986 M05890_2.00.txt\n", "Motif M05890_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "987 M05134_2.00.txt\n", "988 M03078_2.00.txt\n", "989 M08188_2.00.txt\n", "990 M05283_2.00.txt\n", "991 M09149_2.00.txt\n", "992 M07573_2.00.txt\n", "993 M02716_2.00.txt\n", "994 M04359_2.00.txt\n", "995 M04796_2.00.txt\n", "996 M04559_2.00.txt\n", "997 M05332_2.00.txt\n", "998 M07896_2.00.txt\n", "999 M08229_2.00.txt\n", "1000 M05224_2.00.txt\n", "1001 M04518_2.00.txt\n", "1002 M04248_2.00.txt\n", "1003 M04258_2.00.txt\n", "1004 M04916_2.00.txt\n", "1005 M08356_2.00.txt\n", "1006 M04150_2.00.txt\n", "1007 M04780_2.00.txt\n", "1008 M04673_2.00.txt\n", "1009 M09046_2.00.txt\n", "1010 M04871_2.00.txt\n", "1011 M04930_2.00.txt\n", "1012 M04134_2.00.txt\n", "1013 M05837_2.00.txt\n", "Motif M05837_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1014 M04859_2.00.txt\n", "1015 M07763_2.00.txt\n", "1016 M04142_2.00.txt\n", "1017 M07617_2.00.txt\n", "1018 M05494_2.00.txt\n", "1019 M03145_2.00.txt\n", "1020 M04829_2.00.txt\n", "1021 M04034_2.00.txt\n", "1022 M02905_2.00.txt\n", "1023 M09054_2.00.txt\n", "1024 M05371_2.00.txt\n", "1025 M02829_2.00.txt\n", "1026 M05192_2.00.txt\n", "1027 M09129_2.00.txt\n", "1028 M05680_2.00.txt\n", "1029 M05601_2.00.txt\n", "1030 M05304_2.00.txt\n", "1031 M04918_2.00.txt\n", "1032 M03185_2.00.txt\n", "1033 M04917_2.00.txt\n", "1034 M07645_2.00.txt\n", "1035 M05006_2.00.txt\n", "1036 M08384_2.00.txt\n", "1037 M04984_2.00.txt\n", "1038 M05226_2.00.txt\n", "1039 M08806_2.00.txt\n", "1040 M09119_2.00.txt\n", "1041 M08906_2.00.txt\n", "1042 M00264_2.00.txt\n", "1043 M05738_2.00.txt\n", "1044 M04836_2.00.txt\n", "1045 M05818_2.00.txt\n", "1046 M05377_2.00.txt\n", "1047 M08799_2.00.txt\n", "1048 M08946_2.00.txt\n", "1049 M04924_2.00.txt\n", "1050 M03500_2.00.txt\n", "1051 M03330_2.00.txt\n", "1052 M05855_2.00.txt\n", "1053 M08918_2.00.txt\n", "1054 M04446_2.00.txt\n", "1055 M04073_2.00.txt\n", "1056 M08927_2.00.txt\n", "1057 M04324_2.00.txt\n", "1058 M04995_2.00.txt\n", "1059 M04623_2.00.txt\n", "1060 M09118_2.00.txt\n", "1061 M02960_2.00.txt\n", "1062 M09549_2.00.txt\n", "Motif M09549_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1063 M06465_2.00.txt\n", "1064 M09532_2.00.txt\n", "Motif M09532_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1065 M08172_2.00.txt\n", "1066 M09585_2.00.txt\n", "Motif M09585_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1067 M08273_2.00.txt\n", "1068 M07730_2.00.txt\n", "1069 M08244_2.00.txt\n", "1070 M04136_2.00.txt\n", "1071 M07729_2.00.txt\n", "1072 M05296_2.00.txt\n", "1073 M05351_2.00.txt\n", "1074 M03178_2.00.txt\n", "1075 M01304_2.00.txt\n", "1076 M03314_2.00.txt\n", "1077 M04586_2.00.txt\n", "1078 M04262_2.00.txt\n", "1079 M07899_2.00.txt\n", "1080 M09462_2.00.txt\n", "Motif M09462_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1081 M05480_2.00.txt\n", "1082 M01210_2.00.txt\n", "1083 M03570_2.00.txt\n", "1084 M04247_2.00.txt\n", "1085 M03117_2.00.txt\n", "1086 M05053_2.00.txt\n", "1087 M02730_2.00.txt\n", "1088 M05273_2.00.txt\n", "1089 M04357_2.00.txt\n", "1090 M08203_2.00.txt\n", "1091 M05212_2.00.txt\n", "1092 M04074_2.00.txt\n", "1093 M07883_2.00.txt\n", "1094 M04160_2.00.txt\n", "1095 M04163_2.00.txt\n", "1096 M09603_2.00.txt\n", "1097 M04754_2.00.txt\n", "1098 M04818_2.00.txt\n", "1099 M04244_2.00.txt\n", "1100 M08342_2.00.txt\n", "1101 M04981_2.00.txt\n", "1102 M05277_2.00.txt\n", "1103 M07966_2.00.txt\n", "1104 M03033_2.00.txt\n", "1105 M07887_2.00.txt\n", "1106 M03531_2.00.txt\n", "1107 M05752_2.00.txt\n", "1108 M07858_2.00.txt\n", "1109 M03242_2.00.txt\n", "1110 M09275_2.00.txt\n", "1111 M03109_2.00.txt\n", "1112 M09135_2.00.txt\n", "1113 M03292_2.00.txt\n", "1114 M03120_2.00.txt\n", "1115 M00343_2.00.txt\n", "1116 M07781_2.00.txt\n", "1117 M08461_2.00.txt\n", "1118 M08868_2.00.txt\n", "1119 M02802_2.00.txt\n", "1120 M05427_2.00.txt\n", "1121 M04362_2.00.txt\n", "1122 M04378_2.00.txt\n", "1123 M03063_2.00.txt\n", "1124 M04961_2.00.txt\n", "1125 M07834_2.00.txt\n", "1126 M03156_2.00.txt\n", "1127 M08785_2.00.txt\n", "1128 M00289_2.00.txt\n", "1129 M08857_2.00.txt\n", "1130 M08292_2.00.txt\n", "1131 M00315_2.00.txt\n", "1132 M05586_2.00.txt\n", "1133 M08372_2.00.txt\n", "1134 M07895_2.00.txt\n", "1135 M04345_2.00.txt\n", "1136 M08338_2.00.txt\n", "1137 M00263_2.00.txt\n", "1138 M07897_2.00.txt\n", "1139 M09273_2.00.txt\n", "1140 M08264_2.00.txt\n", "1141 M03200_2.00.txt\n", "1142 M08294_2.00.txt\n", "1143 M04075_2.00.txt\n", "1144 M09236_2.00.txt\n", "1145 M08112_2.00.txt\n", "1146 M09269_2.00.txt\n", "1147 M05642_2.00.txt\n", "1148 M05369_2.00.txt\n", "1149 M04418_2.00.txt\n", "1150 M05574_2.00.txt\n", "1151 M04088_2.00.txt\n", "1152 M04038_2.00.txt\n", "1153 M07745_2.00.txt\n", "1154 M07822_2.00.txt\n", "1155 M07567_2.00.txt\n", "1156 M04165_2.00.txt\n", "1157 M07873_2.00.txt\n", "1158 M07718_2.00.txt\n", "1159 M05007_2.00.txt\n", "1160 M07911_2.00.txt\n", "1161 M02962_2.00.txt\n", "1162 M05440_2.00.txt\n", "1163 M04293_2.00.txt\n", "1164 M02891_2.00.txt\n", "1165 M04394_2.00.txt\n", "1166 M00258_2.00.txt\n", "1167 M02940_2.00.txt\n", "1168 M08069_2.00.txt\n", "1169 M02879_2.00.txt\n", "1170 M08809_2.00.txt\n", "1171 M05031_2.00.txt\n" ] }, { "name": "stdout", "output_type": "stream", "text": [ "1172 M09502_2.00.txt\n", "1173 M08913_2.00.txt\n", "1174 M08948_2.00.txt\n", "1175 M08222_2.00.txt\n", "1176 M05302_2.00.txt\n", "1177 M07776_2.00.txt\n", "1178 M02973_2.00.txt\n", "1179 M04980_2.00.txt\n", "1180 M05309_2.00.txt\n", "1181 M08050_2.00.txt\n", "1182 M05765_2.00.txt\n", "1183 M03221_2.00.txt\n", "1184 M04197_2.00.txt\n", "1185 M02906_2.00.txt\n", "1186 M04135_2.00.txt\n", "1187 M03194_2.00.txt\n", "1188 M05829_2.00.txt\n", "1189 M04704_2.00.txt\n", "1190 M05013_2.00.txt\n", "1191 M05071_2.00.txt\n", "1192 M04040_2.00.txt\n", "1193 M00260_2.00.txt\n", "1194 M00351_2.00.txt\n", "1195 M04523_2.00.txt\n", "1196 M07987_2.00.txt\n", "1197 M04225_2.00.txt\n", "1198 M02739_2.00.txt\n", "1199 M08135_2.00.txt\n", "1200 M03235_2.00.txt\n", "1201 M04392_2.00.txt\n", "1202 M09087_2.00.txt\n", "1203 M05233_2.00.txt\n", "1204 M04862_2.00.txt\n", "1205 M07562_2.00.txt\n", "1206 M03246_2.00.txt\n", "1207 M01246_2.00.txt\n", "1208 M05496_2.00.txt\n", "1209 M04081_2.00.txt\n", "1210 M03495_2.00.txt\n", "1211 M09596_2.00.txt\n", "Motif M09596_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1212 M02926_2.00.txt\n", "1213 M03362_2.00.txt\n", "1214 M07984_2.00.txt\n", "1215 M05814_2.00.txt\n", "1216 M04259_2.00.txt\n", "1217 M05191_2.00.txt\n", "1218 M04191_2.00.txt\n", "1219 M04715_2.00.txt\n", "1220 M04059_2.00.txt\n", "1221 M03065_2.00.txt\n", "1222 M05644_2.00.txt\n", "1223 M05374_2.00.txt\n", "1224 M05140_2.00.txt\n", "1225 M02951_2.00.txt\n", "1226 M09264_2.00.txt\n", "1227 M03208_2.00.txt\n", "1228 M08270_2.00.txt\n", "1229 M04240_2.00.txt\n", "1230 M05307_2.00.txt\n", "1231 M05856_2.00.txt\n", "Motif M05856_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1232 M04206_2.00.txt\n", "1233 M03085_2.00.txt\n", "1234 M05126_2.00.txt\n", "1235 M08089_2.00.txt\n", "1236 M07824_2.00.txt\n", "1237 M04441_2.00.txt\n", "1238 M04935_2.00.txt\n", "1239 M08057_2.00.txt\n", "1240 M05257_2.00.txt\n", "1241 M09047_2.00.txt\n", "1242 M04445_2.00.txt\n", "1243 M04534_2.00.txt\n", "1244 M05262_2.00.txt\n", "1245 M05486_2.00.txt\n", "1246 M09394_2.00.txt\n", "1247 M05147_2.00.txt\n", "1248 M05152_2.00.txt\n", "1249 M04159_2.00.txt\n", "1250 M08363_2.00.txt\n", "1251 M09146_2.00.txt\n", "1252 M07797_2.00.txt\n", "1253 M08701_2.00.txt\n", "1254 M04551_2.00.txt\n", "1255 M04830_2.00.txt\n", "1256 M02968_2.00.txt\n", "1257 M08015_2.00.txt\n", "1258 M05695_2.00.txt\n", "1259 M09397_2.00.txt\n", "1260 M02882_2.00.txt\n", "1261 M05578_2.00.txt\n", "1262 M04202_2.00.txt\n", "1263 M04179_2.00.txt\n", "1264 M08731_2.00.txt\n", "1265 M07716_2.00.txt\n", "1266 M04297_2.00.txt\n", "1267 M05663_2.00.txt\n", "1268 M07854_2.00.txt\n", "1269 M04450_2.00.txt\n", "1270 M03113_2.00.txt\n", "1271 M02877_2.00.txt\n", "1272 M08076_2.00.txt\n", "1273 M04636_2.00.txt\n", "1274 M04760_2.00.txt\n", "1275 M07550_2.00.txt\n", "1276 M02763_2.00.txt\n", "1277 M00334_2.00.txt\n", "1278 M03308_2.00.txt\n", "1279 M07977_2.00.txt\n", "1280 M05436_2.00.txt\n", "1281 M04100_2.00.txt\n", "1282 M04217_2.00.txt\n", "1283 M07643_2.00.txt\n", "1284 M05466_2.00.txt\n", "1285 M07907_2.00.txt\n", "1286 M05228_2.00.txt\n", "1287 M04260_2.00.txt\n", "1288 M05123_2.00.txt\n", "1289 M07686_2.00.txt\n", "1290 M05129_2.00.txt\n", "1291 M08304_2.00.txt\n", "1292 M00362_2.00.txt\n", "1293 M05549_2.00.txt\n", "1294 M04464_2.00.txt\n", "1295 M07657_2.00.txt\n", "1296 M07801_2.00.txt\n", "1297 M09115_2.00.txt\n", "1298 M05343_2.00.txt\n", "1299 M04488_2.00.txt\n", "1300 M05198_2.00.txt\n", "1301 M05395_2.00.txt\n", "1302 M03227_2.00.txt\n", "1303 M03443_2.00.txt\n", "1304 M04127_2.00.txt\n", "1305 M07869_2.00.txt\n", "1306 M04467_2.00.txt\n", "1307 M03553_2.00.txt\n", "1308 M05618_2.00.txt\n", "1309 M04685_2.00.txt\n", "1310 M04646_2.00.txt\n", "1311 M07926_2.00.txt\n", "1312 M04325_2.00.txt\n", "1313 M05771_2.00.txt\n", "1314 M02839_2.00.txt\n", "1315 M02873_2.00.txt\n", "1316 M03404_2.00.txt\n", "1317 M03234_2.00.txt\n", "1318 M08935_2.00.txt\n", "1319 M03173_2.00.txt\n", "1320 M07835_2.00.txt\n", "1321 M00265_2.00.txt\n", "1322 M04125_2.00.txt\n", "1323 M00288_2.00.txt\n", "1324 M07847_2.00.txt\n", "1325 M02751_2.00.txt\n", "1326 M05316_2.00.txt\n", "1327 M02902_2.00.txt\n", "1328 M09347_2.00.txt\n", "1329 M09655_2.00.txt\n", "Motif M09655_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1330 M03454_2.00.txt\n", "1331 M04618_2.00.txt\n", "1332 M04055_2.00.txt\n", "1333 M04210_2.00.txt\n", "1334 M04498_2.00.txt\n", "1335 M04603_2.00.txt\n", "1336 M05721_2.00.txt\n", "1337 M05489_2.00.txt\n", "1338 M08789_2.00.txt\n", "1339 M08901_2.00.txt\n", "1340 M03125_2.00.txt\n", "1341 M09453_2.00.txt\n", "Motif M09453_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1342 M04295_2.00.txt\n", "1343 M07880_2.00.txt\n", "1344 M07630_2.00.txt\n", "1345 M02781_2.00.txt\n", "1346 M00837_2.00.txt\n", "1347 M00302_2.00.txt\n", "1348 M05348_2.00.txt\n", "1349 M04546_2.00.txt\n", "1350 M04592_2.00.txt\n", "1351 M07704_2.00.txt\n", "1352 M05215_2.00.txt\n", "1353 M04482_2.00.txt\n", "1354 M05643_2.00.txt\n", "1355 M02942_2.00.txt\n", "1356 M05581_2.00.txt\n", "1357 M00332_2.00.txt\n", "1358 M04123_2.00.txt\n", "1359 M04722_2.00.txt\n", "1360 M02976_2.00.txt\n", "1361 M07759_2.00.txt\n", "1362 M04808_2.00.txt\n", "1363 M04589_2.00.txt\n", "1364 M04223_2.00.txt\n", "1365 M08368_2.00.txt\n", "1366 M04341_2.00.txt\n", "1367 M05220_2.00.txt\n", "1368 M09509_2.00.txt\n", "1369 M05522_2.00.txt\n", "1370 M08734_2.00.txt\n", "1371 M04670_2.00.txt\n", "1372 M07850_2.00.txt\n", "1373 M03022_2.00.txt\n", "1374 M00219_2.00.txt\n", "1375 M04813_2.00.txt\n", "1376 M04914_2.00.txt\n", "1377 M05195_2.00.txt\n", "1378 M04386_2.00.txt\n", "1379 M09415_2.00.txt\n", "1380 M05444_2.00.txt\n", "1381 M02966_2.00.txt\n", "1382 M00330_2.00.txt\n", "1383 M05259_2.00.txt\n", "1384 M07974_2.00.txt\n", "1385 M03087_2.00.txt\n", "1386 M04388_2.00.txt\n", "1387 M09267_2.00.txt\n", "1388 M04261_2.00.txt\n", "1389 M03204_2.00.txt\n", "1390 M05715_2.00.txt\n", "1391 M03024_2.00.txt\n", "1392 M08009_2.00.txt\n", "1393 M05614_2.00.txt\n", "1394 M09282_2.00.txt\n", "1395 M01173_2.00.txt\n", "1396 M04554_2.00.txt\n", "1397 M04795_2.00.txt\n", "1398 M07578_2.00.txt\n", "1399 M08880_2.00.txt\n", "1400 M04612_2.00.txt\n", "1401 M07671_2.00.txt\n", "1402 M05341_2.00.txt\n", "1403 M05787_2.00.txt\n", "1404 M09412_2.00.txt\n", "1405 M04459_2.00.txt\n", "1406 M05303_2.00.txt\n", "1407 M05707_2.00.txt\n", "1408 M04566_2.00.txt\n", "1409 M00344_2.00.txt\n", "1410 M04461_2.00.txt\n", "1411 M03498_2.00.txt\n", "1412 M07877_2.00.txt\n", "1413 M03516_2.00.txt\n", "1414 M09161_2.00.txt\n", "1415 M04872_2.00.txt\n", "1416 M04188_2.00.txt\n", "1417 M05483_2.00.txt\n", "1418 M09287_2.00.txt\n", "1419 M03133_2.00.txt\n", "1420 M07588_2.00.txt\n", "1421 M04900_2.00.txt\n", "1422 M05435_2.00.txt\n", "1423 M04054_2.00.txt\n", "1424 M04561_2.00.txt\n", "1425 M05122_2.00.txt\n", "1426 M05589_2.00.txt\n", "1427 M09157_2.00.txt\n", "1428 M00367_2.00.txt\n", "1429 M04958_2.00.txt\n", "1430 M04181_2.00.txt\n", "1431 M04876_2.00.txt\n", "1432 M04177_2.00.txt\n", "1433 M04330_2.00.txt\n", "1434 M03130_2.00.txt\n", "1435 M05548_2.00.txt\n", "1436 M07633_2.00.txt\n", "1437 M08002_2.00.txt\n", "1438 M04937_2.00.txt\n", "1439 M03337_2.00.txt\n", "1440 M07846_2.00.txt\n", "1441 M05405_2.00.txt\n", "1442 M07607_2.00.txt\n", "1443 M07608_2.00.txt\n", "1444 M04694_2.00.txt\n", "1445 M05611_2.00.txt\n", "1446 M04707_2.00.txt\n", "1447 M03154_2.00.txt\n", "1448 M05350_2.00.txt\n", "1449 M04309_2.00.txt\n", "1450 M04231_2.00.txt\n", "1451 M07844_2.00.txt\n", "1452 M07733_2.00.txt\n", "1453 M09132_2.00.txt\n", "1454 M08707_2.00.txt\n", "1455 M05073_2.00.txt\n", "1456 M04661_2.00.txt\n", "1457 M05363_2.00.txt\n", "1458 M04748_2.00.txt\n", "1459 M05045_2.00.txt\n", "1460 M04329_2.00.txt\n", "1461 M04647_2.00.txt\n", "1462 M05514_2.00.txt\n", "1463 M08274_2.00.txt\n", "1464 M09271_2.00.txt\n", "1465 M09219_2.00.txt\n", "1466 M04781_2.00.txt\n", "1467 M08955_2.00.txt\n", "1468 M05054_2.00.txt\n", "1469 M04015_2.00.txt\n", "1470 M04712_2.00.txt\n", "1471 M05210_2.00.txt\n", "1472 M08367_2.00.txt\n", "1473 M03007_2.00.txt\n", "1474 M07845_2.00.txt\n", "1475 M04804_2.00.txt\n", "1476 M07768_2.00.txt\n", "1477 M02915_2.00.txt\n", "1478 M07967_2.00.txt\n", "1479 M05423_2.00.txt\n", "1480 M04344_2.00.txt\n", "1481 M08209_2.00.txt\n", "1482 M04817_2.00.txt\n", "1483 M05446_2.00.txt\n", "1484 M05016_2.00.txt\n", "1485 M05532_2.00.txt\n", "1486 M04270_2.00.txt\n", "1487 M08182_2.00.txt\n", "1488 M05370_2.00.txt\n", "1489 M00836_2.00.txt\n", "1490 M03556_2.00.txt\n", "1491 M05471_2.00.txt\n", "1492 M03189_2.00.txt\n", "1493 M04167_2.00.txt\n", "1494 M03380_2.00.txt\n", "1495 M07890_2.00.txt\n", "1496 M04285_2.00.txt\n", "1497 M05652_2.00.txt\n", "1498 M04175_2.00.txt\n", "1499 M07789_2.00.txt\n", "1500 M05437_2.00.txt\n", "1501 M04474_2.00.txt\n", "1502 M05236_2.00.txt\n", "1503 M04438_2.00.txt\n", "1504 M04154_2.00.txt\n", "1505 M04147_2.00.txt\n", "1506 M05264_2.00.txt\n", "1507 M09455_2.00.txt\n", "Motif M09455_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1508 M08082_2.00.txt\n", "1509 M02804_2.00.txt\n", "1510 M05107_2.00.txt\n", "1511 M03207_2.00.txt\n", "1512 M05131_2.00.txt\n", "1513 M08054_2.00.txt\n", "1514 M08254_2.00.txt\n", "1515 M04400_2.00.txt\n", "1516 M04648_2.00.txt\n", "1517 M09364_2.00.txt\n", "1518 M08397_2.00.txt\n", "1519 M04304_2.00.txt\n", "1520 M04528_2.00.txt\n", "1521 M08213_2.00.txt\n", "1522 M02982_2.00.txt\n", "1523 M05612_2.00.txt\n", "1524 M05056_2.00.txt\n", "1525 M03158_2.00.txt\n", "1526 M07913_2.00.txt\n", "1527 M07669_2.00.txt\n", "1528 M04955_2.00.txt\n", "1529 M05465_2.00.txt\n", "1530 M07819_2.00.txt\n", "1531 M05400_2.00.txt\n", "1532 M05094_2.00.txt\n", "1533 M00249_2.00.txt\n", "1534 M07864_2.00.txt\n", "1535 M04888_2.00.txt\n", "1536 M09151_2.00.txt\n", "1537 M04865_2.00.txt\n", "1538 M05880_2.00.txt\n", "Motif M05880_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1539 M04948_2.00.txt\n", "1540 M04596_2.00.txt\n", "1541 M04572_2.00.txt\n", "1542 M03017_2.00.txt\n", "1543 M05808_2.00.txt\n", "1544 M03036_2.00.txt\n" ] }, { "name": "stdout", "output_type": "stream", "text": [ "1545 M05121_2.00.txt\n", "1546 M00372_2.00.txt\n", "1547 M07611_2.00.txt\n", "1548 M03126_2.00.txt\n", "1549 M07712_2.00.txt\n", "1550 M05482_2.00.txt\n", "1551 M04486_2.00.txt\n", "1552 M08346_2.00.txt\n", "1553 M03140_2.00.txt\n", "1554 M03528_2.00.txt\n", "1555 M00314_2.00.txt\n", "1556 M08124_2.00.txt\n", "1557 M03561_2.00.txt\n", "1558 M05322_2.00.txt\n", "1559 M04665_2.00.txt\n", "1560 M08855_2.00.txt\n", "1561 M05038_2.00.txt\n", "1562 M07985_2.00.txt\n", "1563 M04868_2.00.txt\n", "1564 M07810_2.00.txt\n", "1565 M04720_2.00.txt\n", "1566 M04664_2.00.txt\n", "1567 M07893_2.00.txt\n", "1568 M03375_2.00.txt\n", "1569 M09537_2.00.txt\n", "1570 M04682_2.00.txt\n", "1571 M08371_2.00.txt\n", "1572 M04402_2.00.txt\n", "1573 M05597_2.00.txt\n", "1574 M04753_2.00.txt\n", "1575 M08891_2.00.txt\n", "1576 M02782_2.00.txt\n", "1577 M05795_2.00.txt\n", "1578 M04385_2.00.txt\n", "1579 M04061_2.00.txt\n", "1580 M04415_2.00.txt\n", "1581 M08293_2.00.txt\n", "1582 M00255_2.00.txt\n", "1583 M05028_2.00.txt\n", "1584 M08198_2.00.txt\n", "1585 M05454_2.00.txt\n", "1586 M00231_2.00.txt\n", "1587 M05870_2.00.txt\n", "1588 M04790_2.00.txt\n", "1589 M04112_2.00.txt\n", "1590 M04507_2.00.txt\n", "1591 M04549_2.00.txt\n", "1592 M04211_2.00.txt\n", "1593 M03343_2.00.txt\n", "1594 M08065_2.00.txt\n", "1595 M04762_2.00.txt\n", "1596 M08231_2.00.txt\n", "1597 M05639_2.00.txt\n", "1598 M05647_2.00.txt\n", "1599 M05342_2.00.txt\n", "1600 M04334_2.00.txt\n", "1601 M05537_2.00.txt\n", "1602 M03399_2.00.txt\n", "1603 M03213_2.00.txt\n", "1604 M03115_2.00.txt\n", "1605 M05882_2.00.txt\n", "Motif M05882_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1606 M09628_2.00.txt\n", "1607 M02921_2.00.txt\n", "1608 M05817_2.00.txt\n", "1609 M05396_2.00.txt\n", "1610 M09032_2.00.txt\n", "1611 M08344_2.00.txt\n", "1612 M03026_2.00.txt\n", "1613 M08330_2.00.txt\n", "1614 M05470_2.00.txt\n", "1615 M05265_2.00.txt\n", "1616 M08377_2.00.txt\n", "1617 M04043_2.00.txt\n", "1618 M08096_2.00.txt\n", "1619 M02984_2.00.txt\n", "1620 M08929_2.00.txt\n", "1621 M07750_2.00.txt\n", "1622 M05186_2.00.txt\n", "1623 M08853_2.00.txt\n", "1624 M05731_2.00.txt\n", "1625 M02808_2.00.txt\n", "1626 M05263_2.00.txt\n", "1627 M04552_2.00.txt\n", "1628 M05488_2.00.txt\n", "1629 M04860_2.00.txt\n", "1630 M08914_2.00.txt\n", "1631 M05379_2.00.txt\n", "1632 M03019_2.00.txt\n", "1633 M08218_2.00.txt\n", "1634 M04562_2.00.txt\n", "1635 M09257_2.00.txt\n", "1636 M05535_2.00.txt\n", "1637 M03245_2.00.txt\n", "1638 M07634_2.00.txt\n", "1639 M04970_2.00.txt\n", "1640 M04669_2.00.txt\n", "1641 M02887_2.00.txt\n", "1642 M07715_2.00.txt\n", "1643 M07919_2.00.txt\n", "1644 M08366_2.00.txt\n", "1645 M04095_2.00.txt\n", "1646 M02643_2.00.txt\n", "Motif M02643_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1647 M09459_2.00.txt\n", "1648 M09168_2.00.txt\n", "1649 M02907_2.00.txt\n", "1650 M08903_2.00.txt\n", "1651 M03317_2.00.txt\n", "1652 M09521_2.00.txt\n", "Motif M09521_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1653 M07943_2.00.txt\n", "1654 M00224_2.00.txt\n", "1655 M07886_2.00.txt\n", "1656 M08348_2.00.txt\n", "1657 M05871_2.00.txt\n", "Motif M05871_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1658 M04426_2.00.txt\n", "1659 M05232_2.00.txt\n", "1660 M08084_2.00.txt\n", "1661 M02995_2.00.txt\n", "1662 M03180_2.00.txt\n", "1663 M09511_2.00.txt\n", "1664 M08804_2.00.txt\n", "1665 M03151_2.00.txt\n", "1666 M04550_2.00.txt\n", "1667 M04174_2.00.txt\n", "1668 M02894_2.00.txt\n", "1669 M04989_2.00.txt\n", "1670 M05826_2.00.txt\n", "1671 M01931_2.00.txt\n", "1672 M09277_2.00.txt\n", "1673 M02092_2.00.txt\n", "1674 M04849_2.00.txt\n", "1675 M04662_2.00.txt\n", "1676 M05397_2.00.txt\n", "1677 M09088_2.00.txt\n", "1678 M05365_2.00.txt\n", "1679 M05280_2.00.txt\n", "1680 M04283_2.00.txt\n", "1681 M02706_2.00.txt\n", "1682 M05005_2.00.txt\n", "1683 M05368_2.00.txt\n", "1684 M00349_2.00.txt\n", "1685 M08951_2.00.txt\n", "1686 M04728_2.00.txt\n", "1687 M04301_2.00.txt\n", "1688 M05495_2.00.txt\n", "1689 M02799_2.00.txt\n", "1690 M07576_2.00.txt\n", "1691 M03211_2.00.txt\n", "1692 M05696_2.00.txt\n", "1693 M05310_2.00.txt\n", "1694 M09018_2.00.txt\n", "1695 M04289_2.00.txt\n", "1696 M04908_2.00.txt\n", "1697 M09411_2.00.txt\n", "1698 M05838_2.00.txt\n", "1699 M04798_2.00.txt\n", "1700 M05441_2.00.txt\n", "1701 M01502_2.00.txt\n", "1702 M03076_2.00.txt\n", "1703 M03164_2.00.txt\n", "1704 M07594_2.00.txt\n", "1705 M04800_2.00.txt\n", "1706 M02801_2.00.txt\n", "1707 M08302_2.00.txt\n", "1708 M05676_2.00.txt\n", "1709 M09097_2.00.txt\n", "1710 M07955_2.00.txt\n", "1711 M04214_2.00.txt\n", "1712 M00346_2.00.txt\n", "1713 M08155_2.00.txt\n", "1714 M09626_2.00.txt\n", "Motif M09626_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1715 M05544_2.00.txt\n", "1716 M05718_2.00.txt\n", "1717 M07814_2.00.txt\n", "1718 M04686_2.00.txt\n", "1719 M03410_2.00.txt\n", "1720 M03391_2.00.txt\n", "1721 M05418_2.00.txt\n", "1722 M05190_2.00.txt\n", "1723 M04427_2.00.txt\n", "1724 M09260_2.00.txt\n", "1725 M05685_2.00.txt\n", "1726 M04317_2.00.txt\n", "1727 M00306_2.00.txt\n", "1728 M04931_2.00.txt\n", "1729 M07641_2.00.txt\n", "1730 M07950_2.00.txt\n", "1731 M05295_2.00.txt\n", "1732 M05344_2.00.txt\n", "1733 M08354_2.00.txt\n", "1734 M00238_2.00.txt\n", "1735 M04902_2.00.txt\n", "1736 M05633_2.00.txt\n", "1737 M05065_2.00.txt\n", "1738 M03351_2.00.txt\n", "1739 M02791_2.00.txt\n", "1740 M03231_2.00.txt\n", "1741 M04610_2.00.txt\n", "1742 M09023_2.00.txt\n", "1743 M03365_2.00.txt\n", "1744 M09136_2.00.txt\n", "1745 M03029_2.00.txt\n", "1746 M07968_2.00.txt\n", "1747 M05297_2.00.txt\n", "1748 M03103_2.00.txt\n", "1749 M04365_2.00.txt\n", "1750 M05791_2.00.txt\n", "1751 M08862_2.00.txt\n", "1752 M00369_2.00.txt\n", "1753 M05527_2.00.txt\n", "1754 M05632_2.00.txt\n", "1755 M09341_2.00.txt\n", "1756 M02091_2.00.txt\n", "1757 M05034_2.00.txt\n", "1758 M09279_2.00.txt\n", "1759 M02795_2.00.txt\n", "1760 M07629_2.00.txt\n", "1761 M02742_2.00.txt\n", "1762 M07625_2.00.txt\n", "1763 M03315_2.00.txt\n", "1764 M02885_2.00.txt\n", "1765 M07796_2.00.txt\n", "1766 M07998_2.00.txt\n", "1767 M03714_2.00.txt\n", "1768 M02685_2.00.txt\n", "1769 M09636_2.00.txt\n", "Motif M09636_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1770 M05227_2.00.txt\n", "1771 M08392_2.00.txt\n", "1772 M02094_2.00.txt\n", "1773 M07888_2.00.txt\n", "1774 M02992_2.00.txt\n", "1775 M04683_2.00.txt\n", "1776 M03356_2.00.txt\n", "1777 M03305_2.00.txt\n", "1778 M03364_2.00.txt\n", "1779 M07646_2.00.txt\n", "1780 M02959_2.00.txt\n", "1781 M04269_2.00.txt\n", "1782 M07925_2.00.txt\n", "1783 M02794_2.00.txt\n", "1784 M05622_2.00.txt\n", "1785 M07908_2.00.txt\n", "1786 M07767_2.00.txt\n", "1787 M04503_2.00.txt\n", "1788 M04121_2.00.txt\n", "1789 M02385_2.00.txt\n", "1790 M08262_2.00.txt\n", "1791 M03378_2.00.txt\n", "1792 M05624_2.00.txt\n", "1793 M03229_2.00.txt\n", "1794 M09116_2.00.txt\n", "1795 M04308_2.00.txt\n", "1796 M05321_2.00.txt\n", "1797 M04671_2.00.txt\n", "1798 M05014_2.00.txt\n", "1799 M04176_2.00.txt\n", "1800 M04033_2.00.txt\n", "1801 M04300_2.00.txt\n", "1802 M03171_2.00.txt\n", "1803 M05267_2.00.txt\n", "1804 M04218_2.00.txt\n", "1805 M05087_2.00.txt\n", "1806 M04361_2.00.txt\n", "1807 M01911_2.00.txt\n", "1808 M07619_2.00.txt\n", "1809 M04927_2.00.txt\n", "1810 M04403_2.00.txt\n", "1811 M03499_2.00.txt\n", "1812 M07748_2.00.txt\n", "1813 M05463_2.00.txt\n", "1814 M04122_2.00.txt\n", "1815 M03551_2.00.txt\n", "1816 M03000_2.00.txt\n", "1817 M03166_2.00.txt\n", "1818 M09393_2.00.txt\n", "1819 M05276_2.00.txt\n", "1820 M03409_2.00.txt\n", "1821 M09647_2.00.txt\n", "1822 M08284_2.00.txt\n", "1823 M00259_2.00.txt\n", "1824 M08791_2.00.txt\n", "1825 M09138_2.00.txt\n", "1826 M07805_2.00.txt\n", "1827 M04941_2.00.txt\n", "1828 M04597_2.00.txt\n", "1829 M03298_2.00.txt\n", "1830 M02395_2.00.txt\n", "1831 M04816_2.00.txt\n", "1832 M05634_2.00.txt\n", "1833 M05401_2.00.txt\n", "1834 M05828_2.00.txt\n", "1835 M08361_2.00.txt\n", "1836 M04797_2.00.txt\n", "1837 M05366_2.00.txt\n", "1838 M05148_2.00.txt\n", "1839 M04511_2.00.txt\n", "1840 M08394_2.00.txt\n", "1841 M04031_2.00.txt\n", "1842 M04807_2.00.txt\n", "1843 M09022_2.00.txt\n", "1844 M08709_2.00.txt\n", "1845 M05508_2.00.txt\n", "1846 M07621_2.00.txt\n", "1847 M03123_2.00.txt\n", "1848 M02736_2.00.txt\n", "1849 M09133_2.00.txt\n", "1850 M07832_2.00.txt\n", "1851 M04785_2.00.txt\n", "1852 M04726_2.00.txt\n", "1853 M05243_2.00.txt\n", "1854 M04799_2.00.txt\n", "1855 M04986_2.00.txt\n", "1856 M04169_2.00.txt\n", "1857 M03398_2.00.txt\n", "1858 M03124_2.00.txt\n", "1859 M08314_2.00.txt\n", "1860 M07988_2.00.txt\n", "1861 M05700_2.00.txt\n", "1862 M05157_2.00.txt\n", "1863 M05743_2.00.txt\n", "1864 M04891_2.00.txt\n", "1865 M07737_2.00.txt\n", "1866 M08811_2.00.txt\n", "1867 M02972_2.00.txt\n", "1868 M02642_2.00.txt\n", "Motif M02642_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1869 M03469_2.00.txt\n", "1870 M05146_2.00.txt\n", "1871 M05516_2.00.txt\n", "1872 M05542_2.00.txt\n", "1873 M05320_2.00.txt\n", "1874 M04078_2.00.txt\n", "1875 M03384_2.00.txt\n", "1876 M00354_2.00.txt\n", "1877 M05278_2.00.txt\n", "1878 M07900_2.00.txt\n", "1879 M04187_2.00.txt\n", "1880 M04420_2.00.txt\n", "1881 M02020_2.00.txt\n", "1882 M05026_2.00.txt\n", "1883 M07708_2.00.txt\n", "1884 M04395_2.00.txt\n", "1885 M08248_2.00.txt\n", "1886 M04633_2.00.txt\n", "1887 M09348_2.00.txt\n", "1888 M08718_2.00.txt\n", "1889 M04316_2.00.txt\n", "1890 M05002_2.00.txt\n", "1891 M04012_2.00.txt\n", "1892 M07661_2.00.txt\n", "1893 M08867_2.00.txt\n", "1894 M00347_2.00.txt\n", "1895 M04077_2.00.txt\n", "1896 M05662_2.00.txt\n", "1897 M05592_2.00.txt\n", "1898 M07995_2.00.txt\n", "1899 M09152_2.00.txt\n", "1900 M07720_2.00.txt\n", "1901 M03226_2.00.txt\n", "1902 M07566_2.00.txt\n", "1903 M04909_2.00.txt\n", "1904 M07599_2.00.txt\n", "1905 M08118_2.00.txt\n", "1906 M08199_2.00.txt\n", "1907 M09281_2.00.txt\n", "1908 M05501_2.00.txt\n", "1909 M08241_2.00.txt\n", "1910 M04759_2.00.txt\n", "1911 M09627_2.00.txt\n", "Motif M09627_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1912 M08727_2.00.txt\n", "1913 M03318_2.00.txt\n", "1914 M09163_2.00.txt\n", "1915 M02766_2.00.txt\n", "1916 M05081_2.00.txt\n", "1917 M04533_2.00.txt\n" ] }, { "name": "stdout", "output_type": "stream", "text": [ "1918 M00968_2.00.txt\n", "1919 M02681_2.00.txt\n", "1920 M03205_2.00.txt\n", "1921 M05060_2.00.txt\n", "1922 M04172_2.00.txt\n", "1923 M07946_2.00.txt\n", "1924 M00294_2.00.txt\n", "1925 M02762_2.00.txt\n", "1926 M05864_2.00.txt\n", "1927 M03480_2.00.txt\n", "1928 M01503_2.00.txt\n", "1929 M08728_2.00.txt\n", "1930 M03088_2.00.txt\n", "1931 M04096_2.00.txt\n", "1932 M03045_2.00.txt\n", "1933 M04021_2.00.txt\n", "1934 M02991_2.00.txt\n", "1935 M07563_2.00.txt\n", "1936 M03020_2.00.txt\n", "1937 M02979_2.00.txt\n", "1938 M09434_2.00.txt\n", "1939 M07689_2.00.txt\n", "1940 M03884_2.00.txt\n", "1941 M05327_2.00.txt\n", "1942 M03350_2.00.txt\n", "1943 M05036_2.00.txt\n", "1944 M03312_2.00.txt\n", "1945 M03082_2.00.txt\n", "1946 M05591_2.00.txt\n", "1947 M08017_2.00.txt\n", "1948 M07699_2.00.txt\n", "1949 M04267_2.00.txt\n", "1950 M08073_2.00.txt\n", "1951 M05810_2.00.txt\n", "1952 M08253_2.00.txt\n", "1953 M00262_2.00.txt\n", "1954 M08224_2.00.txt\n", "1955 M08004_2.00.txt\n", "1956 M04998_2.00.txt\n", "1957 M03068_2.00.txt\n", "1958 M02777_2.00.txt\n", "1959 M07924_2.00.txt\n", "1960 M05476_2.00.txt\n", "1961 M03485_2.00.txt\n", "1962 M02827_2.00.txt\n", "1963 M07990_2.00.txt\n", "1964 M03320_2.00.txt\n", "1965 M07596_2.00.txt\n", "1966 M08925_2.00.txt\n", "1967 M04885_2.00.txt\n", "1968 M08347_2.00.txt\n", "1969 M03452_2.00.txt\n", "1970 M05124_2.00.txt\n", "1971 M02821_2.00.txt\n", "1972 M04255_2.00.txt\n", "1973 M05097_2.00.txt\n", "1974 M05573_2.00.txt\n", "1975 M04826_2.00.txt\n", "1976 M03478_2.00.txt\n", "1977 M08250_2.00.txt\n", "1978 M00312_2.00.txt\n", "1979 M04346_2.00.txt\n", "1980 M08725_2.00.txt\n", "1981 M04053_2.00.txt\n", "1982 M03341_2.00.txt\n", "1983 M08457_2.00.txt\n", "1984 M05788_2.00.txt\n", "1985 M03474_2.00.txt\n", "1986 M08334_2.00.txt\n", "1987 M09558_2.00.txt\n", "Motif M09558_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "1988 M05362_2.00.txt\n", "1989 M04137_2.00.txt\n", "1990 M08798_2.00.txt\n", "1991 M05584_2.00.txt\n", "1992 M03519_2.00.txt\n", "1993 M09222_2.00.txt\n", "1994 M04412_2.00.txt\n", "1995 M05702_2.00.txt\n", "1996 M05455_2.00.txt\n", "1997 M04017_2.00.txt\n", "1998 M08865_2.00.txt\n", "1999 M07800_2.00.txt\n", "2000 M03447_2.00.txt\n", "2001 M04864_2.00.txt\n", "2002 M08724_2.00.txt\n", "2003 M07579_2.00.txt\n", "2004 M04354_2.00.txt\n", "2005 M05613_2.00.txt\n", "2006 M08300_2.00.txt\n", "2007 M00983_2.00.txt\n", "2008 M04050_2.00.txt\n", "2009 M05282_2.00.txt\n", "2010 M08922_2.00.txt\n", "2011 M05502_2.00.txt\n", "2012 M08233_2.00.txt\n", "2013 M04156_2.00.txt\n", "2014 M04508_2.00.txt\n", "2015 M07765_2.00.txt\n", "2016 M07802_2.00.txt\n", "2017 M03383_2.00.txt\n", "2018 M08940_2.00.txt\n", "2019 M04773_2.00.txt\n", "2020 M08792_2.00.txt\n", "2021 M04653_2.00.txt\n", "2022 M05741_2.00.txt\n", "2023 M07736_2.00.txt\n", "2024 M03395_2.00.txt\n", "2025 M07862_2.00.txt\n", "2026 M04280_2.00.txt\n", "2027 M04708_2.00.txt\n", "2028 M07782_2.00.txt\n", "2029 M08805_2.00.txt\n", "2030 M03136_2.00.txt\n", "2031 M04547_2.00.txt\n", "2032 M03193_2.00.txt\n", "2033 M07804_2.00.txt\n", "2034 M04541_2.00.txt\n", "2035 M04621_2.00.txt\n", "2036 M04555_2.00.txt\n", "2037 M03240_2.00.txt\n", "2038 M08117_2.00.txt\n", "2039 M05511_2.00.txt\n", "2040 M05041_2.00.txt\n", "2041 M05284_2.00.txt\n", "2042 M04979_2.00.txt\n", "2043 M04688_2.00.txt\n", "2044 M04783_2.00.txt\n", "2045 M05796_2.00.txt\n", "2046 M09058_2.00.txt\n", "2047 M04870_2.00.txt\n", "2048 M07667_2.00.txt\n", "2049 M04680_2.00.txt\n", "2050 M03190_2.00.txt\n", "2051 M04472_2.00.txt\n", "2052 M07637_2.00.txt\n", "2053 M01204_2.00.txt\n", "2054 M04695_2.00.txt\n", "2055 M03477_2.00.txt\n", "2056 M07615_2.00.txt\n", "2057 M09150_2.00.txt\n", "2058 M02830_2.00.txt\n", "2059 M09546_2.00.txt\n", "Motif M09546_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2060 M02810_2.00.txt\n", "2061 M07656_2.00.txt\n", "2062 M05461_2.00.txt\n", "2063 M07825_2.00.txt\n", "2064 M05274_2.00.txt\n", "2065 M00236_2.00.txt\n", "2066 M04585_2.00.txt\n", "2067 M03319_2.00.txt\n", "2068 M04118_2.00.txt\n", "2069 M08280_2.00.txt\n", "2070 M08362_2.00.txt\n", "2071 M05850_2.00.txt\n", "Motif M05850_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2072 M02989_2.00.txt\n", "2073 M07754_2.00.txt\n", "2074 M00967_2.00.txt\n", "2075 M09351_2.00.txt\n", "2076 M04164_2.00.txt\n", "2077 M05513_2.00.txt\n", "2078 M09398_2.00.txt\n", "2079 M05442_2.00.txt\n", "2080 M05247_2.00.txt\n", "2081 M05575_2.00.txt\n", "2082 M05820_2.00.txt\n", "2083 M05142_2.00.txt\n", "2084 M07794_2.00.txt\n", "2085 M00339_2.00.txt\n", "2086 M08889_2.00.txt\n", "2087 M05617_2.00.txt\n", "2088 M05462_2.00.txt\n", "2089 M08141_2.00.txt\n", "2090 M04810_2.00.txt\n", "2091 M03291_2.00.txt\n", "2092 M08074_2.00.txt\n", "2093 M05629_2.00.txt\n", "2094 M09456_2.00.txt\n", "Motif M09456_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2095 M04056_2.00.txt\n", "2096 M07915_2.00.txt\n", "2097 M00352_2.00.txt\n", "2098 M08782_2.00.txt\n", "2099 M05868_2.00.txt\n", "Motif M05868_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2100 M05812_2.00.txt\n", "2101 M02759_2.00.txt\n", "2102 M05625_2.00.txt\n", "2103 M08902_2.00.txt\n", "2104 M05493_2.00.txt\n", "2105 M02758_2.00.txt\n", "2106 M04042_2.00.txt\n", "2107 M05384_2.00.txt\n", "2108 M02805_2.00.txt\n", "2109 M04775_2.00.txt\n", "2110 M00738_2.00.txt\n", "2111 M04913_2.00.txt\n", "2112 M03043_2.00.txt\n", "2113 M00373_2.00.txt\n", "2114 M07879_2.00.txt\n", "2115 M04252_2.00.txt\n", "2116 M03353_2.00.txt\n", "2117 M03222_2.00.txt\n", "2118 M09530_2.00.txt\n", "2119 M08339_2.00.txt\n", "2120 M07660_2.00.txt\n", "2121 M08928_2.00.txt\n", "2122 M04479_2.00.txt\n", "2123 M05150_2.00.txt\n", "2124 M05181_2.00.txt\n", "2125 M05138_2.00.txt\n", "2126 M05231_2.00.txt\n", "2127 M03074_2.00.txt\n", "2128 M05510_2.00.txt\n", "2129 M04254_2.00.txt\n", "2130 M05773_2.00.txt\n", "2131 M08350_2.00.txt\n", "2132 M08325_2.00.txt\n", "2133 M00325_2.00.txt\n", "2134 M08875_2.00.txt\n", "2135 M05648_2.00.txt\n", "2136 M05052_2.00.txt\n", "2137 M04569_2.00.txt\n", "2138 M04806_2.00.txt\n", "2139 M04558_2.00.txt\n", "2140 M07701_2.00.txt\n", "2141 M07945_2.00.txt\n", "2142 M05199_2.00.txt\n", "2143 M08924_2.00.txt\n", "2144 M07587_2.00.txt\n", "2145 M00361_2.00.txt\n", "2146 M07757_2.00.txt\n", "2147 M04721_2.00.txt\n", "2148 M08324_2.00.txt\n", "2149 M04372_2.00.txt\n", "2150 M05607_2.00.txt\n", "2151 M04557_2.00.txt\n", "2152 M02975_2.00.txt\n", "2153 M08307_2.00.txt\n", "2154 M03571_2.00.txt\n", "2155 M07670_2.00.txt\n", "2156 M08105_2.00.txt\n", "2157 M09249_2.00.txt\n", "2158 M07626_2.00.txt\n", "2159 M01171_2.00.txt\n", "2160 M05561_2.00.txt\n", "2161 M05724_2.00.txt\n", "2162 M03034_2.00.txt\n", "2163 M04067_2.00.txt\n", "2164 M08240_2.00.txt\n", "2165 M08267_2.00.txt\n", "2166 M07724_2.00.txt\n", "2167 M02754_2.00.txt\n", "2168 M00736_2.00.txt\n", "2169 M07595_2.00.txt\n", "2170 M08326_2.00.txt\n", "2171 M09541_2.00.txt\n", "Motif M09541_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2172 M08291_2.00.txt\n", "2173 M02964_2.00.txt\n", "2174 M01247_2.00.txt\n", "2175 M04487_2.00.txt\n", "2176 M02854_2.00.txt\n", "2177 M09239_2.00.txt\n", "2178 M05473_2.00.txt\n", "2179 M05615_2.00.txt\n", "2180 M04130_2.00.txt\n", "2181 M08088_2.00.txt\n", "2182 M07702_2.00.txt\n", "2183 M03472_2.00.txt\n", "2184 M02394_2.00.txt\n", "2185 M05298_2.00.txt\n", "2186 M03488_2.00.txt\n", "2187 M03549_2.00.txt\n", "2188 M03311_2.00.txt\n", "2189 M03508_2.00.txt\n", "2190 M08075_2.00.txt\n", "2191 M03554_2.00.txt\n", "2192 M05879_2.00.txt\n", "Motif M05879_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2193 M03715_2.00.txt\n", "2194 M02911_2.00.txt\n", "2195 M02836_2.00.txt\n", "2196 M04895_2.00.txt\n", "2197 M05160_2.00.txt\n", "2198 M05456_2.00.txt\n", "2199 M02858_2.00.txt\n", "2200 M05347_2.00.txt\n", "2201 M00228_2.00.txt\n", "2202 M02890_2.00.txt\n", "2203 M04339_2.00.txt\n", "2204 M04026_2.00.txt\n", "2205 M05425_2.00.txt\n", "2206 M07628_2.00.txt\n", "2207 M04442_2.00.txt\n", "2208 M04381_2.00.txt\n", "2209 M04469_2.00.txt\n", "2210 M04675_2.00.txt\n", "2211 M08310_2.00.txt\n", "2212 M03159_2.00.txt\n", "2213 M04774_2.00.txt\n", "2214 M09125_2.00.txt\n", "2215 M03327_2.00.txt\n", "2216 M05093_2.00.txt\n", "2217 M04988_2.00.txt\n", "2218 M03021_2.00.txt\n", "2219 M04277_2.00.txt\n", "2220 M04751_2.00.txt\n", "2221 M09128_2.00.txt\n", "2222 M04638_2.00.txt\n", "2223 M04443_2.00.txt\n", "2224 M00250_2.00.txt\n", "2225 M05469_2.00.txt\n", "2226 M05288_2.00.txt\n", "2227 M01507_2.00.txt\n", "2228 M04779_2.00.txt\n", "2229 M04702_2.00.txt\n", "2230 M08055_2.00.txt\n", "2231 M09489_2.00.txt\n", "Motif M09489_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2232 M03149_2.00.txt\n", "2233 M07972_2.00.txt\n", "2234 M07684_2.00.txt\n", "2235 M08263_2.00.txt\n", "2236 M03217_2.00.txt\n", "2237 M03354_2.00.txt\n", "2238 M05271_2.00.txt\n", "2239 M07766_2.00.txt\n", "2240 M00230_2.00.txt\n", "2241 M04953_2.00.txt\n", "2242 M04568_2.00.txt\n", "2243 M02789_2.00.txt\n", "2244 M02796_2.00.txt\n", "2245 M09036_2.00.txt\n", "2246 M08739_2.00.txt\n", "2247 M09638_2.00.txt\n", "2248 M07627_2.00.txt\n", "2249 M04046_2.00.txt\n", "2250 M04407_2.00.txt\n", "2251 M07837_2.00.txt\n", "2252 M05770_2.00.txt\n", "2253 M08813_2.00.txt\n", "2254 M03400_2.00.txt\n", "2255 M04457_2.00.txt\n", "2256 M04475_2.00.txt\n", "2257 M04103_2.00.txt\n", "2258 M05806_2.00.txt\n", "2259 M07662_2.00.txt\n", "2260 M04032_2.00.txt\n", "2261 M08961_2.00.txt\n", "2262 M04151_2.00.txt\n", "2263 M02874_2.00.txt\n", "2264 M03497_2.00.txt\n", "2265 M08711_2.00.txt\n", "2266 M08012_2.00.txt\n", "2267 M05492_2.00.txt\n", "2268 M07580_2.00.txt\n", "2269 M09392_2.00.txt\n", "2270 M05637_2.00.txt\n", "2271 M02922_2.00.txt\n", "2272 M04983_2.00.txt\n", "2273 M04915_2.00.txt\n", "2274 M04028_2.00.txt\n", "2275 M08191_2.00.txt\n", "2276 M00233_2.00.txt\n", "2277 M01930_2.00.txt\n", "2278 M05207_2.00.txt\n", "2279 M09611_2.00.txt\n", "Motif M09611_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2280 M02834_2.00.txt\n", "2281 M05285_2.00.txt\n", "2282 M09093_2.00.txt\n", "2283 M01928_2.00.txt\n", "2284 M04431_2.00.txt\n", "2285 M08939_2.00.txt\n", "2286 M03089_2.00.txt\n", "2287 M05381_2.00.txt\n", "2288 M04772_2.00.txt\n", "2289 M03015_2.00.txt\n", "2290 M03302_2.00.txt\n" ] }, { "name": "stdout", "output_type": "stream", "text": [ "2291 M08795_2.00.txt\n", "2292 M00276_2.00.txt\n", "2293 M04242_2.00.txt\n", "2294 M02895_2.00.txt\n", "2295 M03468_2.00.txt\n", "2296 M02917_2.00.txt\n", "2297 M02897_2.00.txt\n", "2298 M05603_2.00.txt\n", "2299 M00364_2.00.txt\n", "2300 M07816_2.00.txt\n", "2301 M02831_2.00.txt\n", "2302 M05805_2.00.txt\n", "2303 M07792_2.00.txt\n", "2304 M04537_2.00.txt\n", "2305 M00345_2.00.txt\n", "2306 M08132_2.00.txt\n", "2307 M05630_2.00.txt\n", "2308 M08908_2.00.txt\n", "2309 M03143_2.00.txt\n", "2310 M05240_2.00.txt\n", "2311 M03067_2.00.txt\n", "2312 M04463_2.00.txt\n", "2313 M05061_2.00.txt\n", "2314 M08905_2.00.txt\n", "2315 M08308_2.00.txt\n", "2316 M04556_2.00.txt\n", "2317 M05865_2.00.txt\n", "Motif M05865_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2318 M04667_2.00.txt\n", "2319 M07785_2.00.txt\n", "2320 M02095_2.00.txt\n", "2321 M05560_2.00.txt\n", "2322 M09443_2.00.txt\n", "2323 M08810_2.00.txt\n", "2324 M04782_2.00.txt\n", "2325 M08178_2.00.txt\n", "2326 M08133_2.00.txt\n", "2327 M03473_2.00.txt\n", "2328 M08944_2.00.txt\n", "2329 M04236_2.00.txt\n", "2330 M02970_2.00.txt\n", "2331 M04899_2.00.txt\n", "2332 M04727_2.00.txt\n", "2333 M05759_2.00.txt\n", "2334 M03563_2.00.txt\n", "2335 M02737_2.00.txt\n", "2336 M02927_2.00.txt\n", "2337 M03493_2.00.txt\n", "2338 M05732_2.00.txt\n", "2339 M03924_2.00.txt\n", "2340 M04364_2.00.txt\n", "2341 M04419_2.00.txt\n", "2342 M05726_2.00.txt\n", "2343 M05050_2.00.txt\n", "2344 M04530_2.00.txt\n", "2345 M00252_2.00.txt\n", "2346 M09297_2.00.txt\n", "2347 M07843_2.00.txt\n", "2348 M09343_2.00.txt\n", "2349 M08783_2.00.txt\n", "2350 M07909_2.00.txt\n", "2351 M02963_2.00.txt\n", "2352 M09086_2.00.txt\n", "2353 M03885_2.00.txt\n", "2354 M09375_2.00.txt\n", "2355 M08387_2.00.txt\n", "2356 M03492_2.00.txt\n", "2357 M09096_2.00.txt\n", "2358 M04106_2.00.txt\n", "2359 M02803_2.00.txt\n", "2360 M05340_2.00.txt\n", "2361 M08037_2.00.txt\n", "2362 M05832_2.00.txt\n", "Motif M05832_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2363 M05523_2.00.txt\n", "2364 M07569_2.00.txt\n", "2365 M03413_2.00.txt\n", "2366 M03509_2.00.txt\n", "2367 M07923_2.00.txt\n", "2368 M04923_2.00.txt\n", "2369 M04041_2.00.txt\n", "2370 M05194_2.00.txt\n", "2371 M04965_2.00.txt\n", "2372 M03161_2.00.txt\n", "2373 M09486_2.00.txt\n", "2374 M04599_2.00.txt\n", "2375 M08108_2.00.txt\n", "2376 M04922_2.00.txt\n", "2377 M08249_2.00.txt\n", "2378 M03359_2.00.txt\n", "2379 M05155_2.00.txt\n", "2380 M04102_2.00.txt\n", "2381 M08916_2.00.txt\n", "2382 M01511_2.00.txt\n", "2383 M04408_2.00.txt\n", "2384 M05196_2.00.txt\n", "2385 M04548_2.00.txt\n", "2386 M04462_2.00.txt\n", "2387 M07780_2.00.txt\n", "2388 M07842_2.00.txt\n", "2389 M07774_2.00.txt\n", "2390 M04856_2.00.txt\n", "2391 M05184_2.00.txt\n", "2392 M09451_2.00.txt\n", "Motif M09451_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2393 M05238_2.00.txt\n", "2394 M04542_2.00.txt\n", "2395 M09221_2.00.txt\n", "2396 M07828_2.00.txt\n", "2397 M05722_2.00.txt\n", "2398 M03196_2.00.txt\n", "2399 M03346_2.00.txt\n", "2400 M05074_2.00.txt\n", "2401 M05219_2.00.txt\n", "2402 M05080_2.00.txt\n", "2403 M05178_2.00.txt\n", "2404 M05136_2.00.txt\n", "2405 M08364_2.00.txt\n", "2406 M03025_2.00.txt\n", "2407 M07751_2.00.txt\n", "2408 M03111_2.00.txt\n", "2409 M05372_2.00.txt\n", "2410 M08271_2.00.txt\n", "2411 M03135_2.00.txt\n", "2412 M04841_2.00.txt\n", "2413 M07706_2.00.txt\n", "2414 M08378_2.00.txt\n", "2415 M09545_2.00.txt\n", "2416 M05803_2.00.txt\n", "2417 M03224_2.00.txt\n", "2418 M03569_2.00.txt\n", "2419 M03008_2.00.txt\n", "2420 M09059_2.00.txt\n", "2421 M05408_2.00.txt\n", "2422 M08878_2.00.txt\n", "2423 M05505_2.00.txt\n", "2424 M03012_2.00.txt\n", "2425 M08275_2.00.txt\n", "2426 M05512_2.00.txt\n", "2427 M04905_2.00.txt\n", "2428 M05293_2.00.txt\n", "2429 M04627_2.00.txt\n", "2430 M07961_2.00.txt\n", "2431 M02741_2.00.txt\n", "2432 M00277_2.00.txt\n", "2433 M03303_2.00.txt\n", "2434 M04972_2.00.txt\n", "2435 M08013_2.00.txt\n", "2436 M02641_2.00.txt\n", "Motif M02641_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2437 M02732_2.00.txt\n", "2438 M04296_2.00.txt\n", "2439 M05209_2.00.txt\n", "2440 M08001_2.00.txt\n", "2441 M02908_2.00.txt\n", "2442 M04264_2.00.txt\n", "2443 M03051_2.00.txt\n", "2444 M08164_2.00.txt\n", "2445 M09268_2.00.txt\n", "2446 M08852_2.00.txt\n", "2447 M03514_2.00.txt\n", "2448 M02755_2.00.txt\n", "2449 M04832_2.00.txt\n", "2450 M09390_2.00.txt\n", "2451 M04757_2.00.txt\n", "2452 M03013_2.00.txt\n", "2453 M01914_2.00.txt\n", "2454 M04573_2.00.txt\n", "2455 M05877_2.00.txt\n", "Motif M05877_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2456 M05117_2.00.txt\n", "2457 M07682_2.00.txt\n", "2458 M04614_2.00.txt\n", "2459 M05168_2.00.txt\n", "2460 M05193_2.00.txt\n", "2461 M03466_2.00.txt\n", "2462 M08056_2.00.txt\n", "2463 M03241_2.00.txt\n", "2464 M05063_2.00.txt\n", "2465 M05375_2.00.txt\n", "2466 M04932_2.00.txt\n", "2467 M00355_2.00.txt\n", "2468 M09030_2.00.txt\n", "2469 M05556_2.00.txt\n", "2470 M07695_2.00.txt\n", "2471 M04493_2.00.txt\n", "2472 M05079_2.00.txt\n", "2473 M02765_2.00.txt\n", "2474 M04495_2.00.txt\n", "2475 M08812_2.00.txt\n", "2476 M02845_2.00.txt\n", "2477 M05066_2.00.txt\n", "2478 M05088_2.00.txt\n", "2479 M05668_2.00.txt\n", "2480 M09361_2.00.txt\n", "2481 M08864_2.00.txt\n", "2482 M09500_2.00.txt\n", "Motif M09500_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2483 M09298_2.00.txt\n", "2484 M08064_2.00.txt\n", "2485 M05821_2.00.txt\n", "2486 M04734_2.00.txt\n", "2487 M04591_2.00.txt\n", "2488 M08850_2.00.txt\n", "2489 M03132_2.00.txt\n", "2490 M04153_2.00.txt\n", "2491 M04212_2.00.txt\n", "2492 M05314_2.00.txt\n", "2493 M03393_2.00.txt\n", "2494 M05605_2.00.txt\n", "2495 M02785_2.00.txt\n", "2496 M08333_2.00.txt\n", "2497 M05172_2.00.txt\n", "2498 M04323_2.00.txt\n", "2499 M05170_2.00.txt\n", "2500 M04505_2.00.txt\n", "2501 M04668_2.00.txt\n", "2502 M04886_2.00.txt\n", "2503 M02853_2.00.txt\n", "2504 M08234_2.00.txt\n", "2505 M09274_2.00.txt\n", "2506 M03408_2.00.txt\n", "2507 M03244_2.00.txt\n", "2508 M08005_2.00.txt\n", "2509 M09250_2.00.txt\n", "2510 M04383_2.00.txt\n", "2511 M04192_2.00.txt\n", "2512 M03177_2.00.txt\n", "2513 M05382_2.00.txt\n", "2514 M05448_2.00.txt\n", "2515 M05792_2.00.txt\n", "2516 M08153_2.00.txt\n", "2517 M07734_2.00.txt\n", "2518 M05564_2.00.txt\n", "2519 M04879_2.00.txt\n", "2520 M09044_2.00.txt\n", "2521 M03555_2.00.txt\n", "2522 M03529_2.00.txt\n", "2523 M07817_2.00.txt\n", "2524 M08919_2.00.txt\n", "2525 M04725_2.00.txt\n", "2526 M07603_2.00.txt\n", "2527 M04079_2.00.txt\n", "2528 M03361_2.00.txt\n", "2529 M07658_2.00.txt\n", "2530 M08953_2.00.txt\n", "2531 M00245_2.00.txt\n", "2532 M02784_2.00.txt\n", "2533 M05305_2.00.txt\n", "2534 M04867_2.00.txt\n", "2535 M09505_2.00.txt\n", "2536 M04010_2.00.txt\n", "2537 M07610_2.00.txt\n", "2538 M09160_2.00.txt\n", "2539 M08937_2.00.txt\n", "2540 M05188_2.00.txt\n", "2541 M07609_2.00.txt\n", "2542 M05798_2.00.txt\n", "2543 M02946_2.00.txt\n", "2544 M04622_2.00.txt\n", "2545 M08298_2.00.txt\n", "2546 M05411_2.00.txt\n", "2547 M00735_2.00.txt\n", "2548 M05673_2.00.txt\n", "2549 M09167_2.00.txt\n", "2550 M07855_2.00.txt\n", "2551 M07676_2.00.txt\n", "2552 M07710_2.00.txt\n", "2553 M02788_2.00.txt\n", "2554 M02901_2.00.txt\n", "2555 M07790_2.00.txt\n", "2556 M05458_2.00.txt\n", "2557 M09559_2.00.txt\n", "2558 M04883_2.00.txt\n", "2559 M03023_2.00.txt\n", "2560 M08296_2.00.txt\n", "2561 M00338_2.00.txt\n", "2562 M05784_2.00.txt\n", "2563 M04387_2.00.txt\n", "2564 M04742_2.00.txt\n", "2565 M08957_2.00.txt\n", "2566 M00313_2.00.txt\n", "2567 M08741_2.00.txt\n", "2568 M08854_2.00.txt\n", "2569 M03179_2.00.txt\n", "2570 M08186_2.00.txt\n", "2571 M08732_2.00.txt\n", "2572 M03042_2.00.txt\n", "2573 M00283_2.00.txt\n", "2574 M07941_2.00.txt\n", "2575 M04732_2.00.txt\n", "2576 M03576_2.00.txt\n", "2577 M07973_2.00.txt\n", "2578 M05279_2.00.txt\n", "2579 M08166_2.00.txt\n", "2580 M02835_2.00.txt\n", "2581 M05658_2.00.txt\n", "2582 M08921_2.00.txt\n", "2583 M03163_2.00.txt\n", "2584 M03152_2.00.txt\n", "2585 M05010_2.00.txt\n", "2586 M04750_2.00.txt\n", "2587 M05552_2.00.txt\n", "2588 M02888_2.00.txt\n", "2589 M09290_2.00.txt\n", "2590 M03039_2.00.txt\n", "2591 M02886_2.00.txt\n", "2592 M08129_2.00.txt\n", "2593 M05075_2.00.txt\n", "2594 M02923_2.00.txt\n", "2595 M00257_2.00.txt\n", "2596 M04737_2.00.txt\n", "2597 M04643_2.00.txt\n", "2598 M08800_2.00.txt\n", "2599 M04689_2.00.txt\n", "2600 M09117_2.00.txt\n", "2601 M05528_2.00.txt\n", "2602 M07878_2.00.txt\n", "2603 M04367_2.00.txt\n", "2604 M03481_2.00.txt\n", "2605 M07902_2.00.txt\n", "2606 M07986_2.00.txt\n", "2607 M05246_2.00.txt\n", "2608 M07829_2.00.txt\n", "2609 M04964_2.00.txt\n", "2610 M04168_2.00.txt\n", "2611 M05736_2.00.txt\n", "2612 M08281_2.00.txt\n", "2613 M05562_2.00.txt\n", "2614 M02790_2.00.txt\n", "2615 M02893_2.00.txt\n", "2616 M05443_2.00.txt\n", "2617 M07942_2.00.txt\n", "2618 M08808_2.00.txt\n", "2619 M05474_2.00.txt\n", "2620 M03309_2.00.txt\n", "2621 M04166_2.00.txt\n", "2622 M04048_2.00.txt\n", "2623 M09130_2.00.txt\n", "2624 M04770_2.00.txt\n", "2625 M07705_2.00.txt\n", "2626 M04802_2.00.txt\n", "2627 M08787_2.00.txt\n", "2628 M09265_2.00.txt\n", "2629 M05708_2.00.txt\n", "2630 M08357_2.00.txt\n", "2631 M09387_2.00.txt\n", "2632 M08872_2.00.txt\n", "2633 M05018_2.00.txt\n", "2634 M05230_2.00.txt\n", "2635 M08295_2.00.txt\n", "2636 M08915_2.00.txt\n", "2637 M00220_2.00.txt\n", "2638 M07959_2.00.txt\n", "2639 M04358_2.00.txt\n", "2640 M08278_2.00.txt\n", "2641 M05599_2.00.txt\n", "2642 M07830_2.00.txt\n", "2643 M04691_2.00.txt\n", "2644 M04512_2.00.txt\n", "2645 M00271_2.00.txt\n", "2646 M04946_2.00.txt\n", "2647 M09606_2.00.txt\n", "Motif M09606_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2648 M04024_2.00.txt\n", "2649 M04186_2.00.txt\n", "2650 M05312_2.00.txt\n", "2651 M04701_2.00.txt\n", "2652 M08171_2.00.txt\n", "2653 M05203_2.00.txt\n", "2654 M04736_2.00.txt\n", "2655 M04575_2.00.txt\n", "2656 M07713_2.00.txt\n", "2657 M09061_2.00.txt\n", "2658 M05223_2.00.txt\n", "2659 M08328_2.00.txt\n", "2660 M04524_2.00.txt\n" ] }, { "name": "stdout", "output_type": "stream", "text": [ "2661 M02786_2.00.txt\n", "2662 M05179_2.00.txt\n", "2663 M09153_2.00.txt\n", "2664 M08900_2.00.txt\n", "2665 M08007_2.00.txt\n", "2666 M02993_2.00.txt\n", "2667 M03114_2.00.txt\n", "2668 M03567_2.00.txt\n", "2669 M03373_2.00.txt\n", "2670 M03348_2.00.txt\n", "2671 M09610_2.00.txt\n", "Motif M09610_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2672 M08793_2.00.txt\n", "2673 M04117_2.00.txt\n", "2674 M04332_2.00.txt\n", "2675 M04027_2.00.txt\n", "2676 M09050_2.00.txt\n", "2677 M02996_2.00.txt\n", "2678 M03340_2.00.txt\n", "2679 M07786_2.00.txt\n", "2680 M04977_2.00.txt\n", "2681 M09235_2.00.txt\n", "2682 M09237_2.00.txt\n", "2683 M07672_2.00.txt\n", "2684 M05540_2.00.txt\n", "2685 M07651_2.00.txt\n", "2686 M03394_2.00.txt\n", "2687 M08323_2.00.txt\n", "2688 M04949_2.00.txt\n", "2689 M02710_2.00.txt\n", "2690 M08936_2.00.txt\n", "2691 M05449_2.00.txt\n", "2692 M07598_2.00.txt\n", "2693 M04861_2.00.txt\n", "2694 M04290_2.00.txt\n", "2695 M07954_2.00.txt\n", "2696 M07616_2.00.txt\n", "2697 M00278_2.00.txt\n", "2698 M03496_2.00.txt\n", "2699 M05237_2.00.txt\n", "2700 M04520_2.00.txt\n", "2701 M09336_2.00.txt\n", "2702 M05699_2.00.txt\n", "2703 M03446_2.00.txt\n", "2704 M04974_2.00.txt\n", "2705 M08352_2.00.txt\n", "2706 M04208_2.00.txt\n", "2707 M07584_2.00.txt\n", "2708 M02978_2.00.txt\n", "2709 M04577_2.00.txt\n", "2710 M04880_2.00.txt\n", "2711 M08373_2.00.txt\n", "2712 M03118_2.00.txt\n", "2713 M04480_2.00.txt\n", "2714 M05719_2.00.txt\n", "2715 M00284_2.00.txt\n", "2716 M09524_2.00.txt\n", "2717 M03223_2.00.txt\n", "2718 M07971_2.00.txt\n", "2719 M05714_2.00.txt\n", "2720 M04471_2.00.txt\n", "2721 M07889_2.00.txt\n", "2722 M05206_2.00.txt\n", "2723 M04934_2.00.txt\n", "2724 M05781_2.00.txt\n", "2725 M05256_2.00.txt\n", "2726 M02746_2.00.txt\n", "2727 M07749_2.00.txt\n", "2728 M07787_2.00.txt\n", "2729 M05682_2.00.txt\n", "2730 M05487_2.00.txt\n", "2731 M02747_2.00.txt\n", "2732 M03165_2.00.txt\n", "2733 M04155_2.00.txt\n", "2734 M09534_2.00.txt\n", "Motif M09534_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2735 M05753_2.00.txt\n", "2736 M05593_2.00.txt\n", "2737 M05789_2.00.txt\n", "2738 M04539_2.00.txt\n", "2739 M03580_2.00.txt\n", "2740 M05385_2.00.txt\n", "2741 M04844_2.00.txt\n", "2742 M05606_2.00.txt\n", "2743 M09158_2.00.txt\n", "2744 M09143_2.00.txt\n", "2745 M05570_2.00.txt\n", "2746 M04884_2.00.txt\n", "2747 M03219_2.00.txt\n", "2748 M09060_2.00.txt\n", "2749 M08717_2.00.txt\n", "2750 M08379_2.00.txt\n", "2751 M04299_2.00.txt\n", "2752 M08393_2.00.txt\n", "2753 M04069_2.00.txt\n", "2754 M04506_2.00.txt\n", "2755 M05403_2.00.txt\n", "2756 M03091_2.00.txt\n", "2757 M08014_2.00.txt\n", "2758 M09461_2.00.txt\n", "2759 M05545_2.00.txt\n", "2760 M03366_2.00.txt\n", "2761 M02780_2.00.txt\n", "2762 M07989_2.00.txt\n", "2763 M05111_2.00.txt\n", "2764 M09263_2.00.txt\n", "2765 M03574_2.00.txt\n", "2766 M04377_2.00.txt\n", "2767 M03225_2.00.txt\n", "2768 M04604_2.00.txt\n", "2769 M05090_2.00.txt\n", "2770 M08279_2.00.txt\n", "2771 M05024_2.00.txt\n", "2772 M08003_2.00.txt\n", "2773 M08026_2.00.txt\n", "2774 M08462_2.00.txt\n", "2775 M05688_2.00.txt\n", "2776 M09550_2.00.txt\n", "Motif M09550_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2777 M02945_2.00.txt\n", "2778 M05804_2.00.txt\n", "2779 M00360_2.00.txt\n", "2780 M05177_2.00.txt\n", "2781 M05588_2.00.txt\n", "2782 M05705_2.00.txt\n", "2783 M00350_2.00.txt\n", "2784 M00331_2.00.txt\n", "2785 M04835_2.00.txt\n", "2786 M05225_2.00.txt\n", "2787 M02913_2.00.txt\n", "2788 M04432_2.00.txt\n", "2789 M00311_2.00.txt\n", "2790 M09055_2.00.txt\n", "2791 M09389_2.00.txt\n", "2792 M05202_2.00.txt\n", "2793 M02852_2.00.txt\n", "2794 M05834_2.00.txt\n", "Motif M05834_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2795 M04833_2.00.txt\n", "2796 M04947_2.00.txt\n", "2797 M08445_2.00.txt\n", "2798 M03300_2.00.txt\n", "2799 M04018_2.00.txt\n", "2800 M09629_2.00.txt\n", "Motif M09629_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2801 M08242_2.00.txt\n", "2802 M05386_2.00.txt\n", "2803 M08259_2.00.txt\n", "2804 M02760_2.00.txt\n", "2805 M08094_2.00.txt\n", "2806 M04298_2.00.txt\n", "2807 M07892_2.00.txt\n", "2808 M05665_2.00.txt\n", "2809 M05334_2.00.txt\n", "2810 M04085_2.00.txt\n", "2811 M04221_2.00.txt\n", "2812 M08019_2.00.txt\n", "2813 M08897_2.00.txt\n", "2814 M08386_2.00.txt\n", "2815 M04158_2.00.txt\n", "2816 M03162_2.00.txt\n", "2817 M04094_2.00.txt\n", "2818 M05851_2.00.txt\n", "2819 M00740_2.00.txt\n", "2820 M08083_2.00.txt\n", "2821 M05413_2.00.txt\n", "2822 M08187_2.00.txt\n", "2823 M05291_2.00.txt\n", "2824 M08860_2.00.txt\n", "2825 M08175_2.00.txt\n", "2826 M08202_2.00.txt\n", "2827 M04241_2.00.txt\n", "2828 M04213_2.00.txt\n", "2829 M08947_2.00.txt\n", "2830 M02761_2.00.txt\n", "2831 M05751_2.00.txt\n", "2832 M02967_2.00.txt\n", "2833 M04630_2.00.txt\n", "2834 M00988_2.00.txt\n", "2835 M03550_2.00.txt\n", "2836 M05301_2.00.txt\n", "2837 M08160_2.00.txt\n", "2838 M07917_2.00.txt\n", "2839 M05778_2.00.txt\n", "2840 M03083_2.00.txt\n", "2841 M00371_2.00.txt\n", "2842 M04700_2.00.txt\n", "2843 M05102_2.00.txt\n", "2844 M00267_2.00.txt\n", "2845 M05420_2.00.txt\n", "2846 M03233_2.00.txt\n", "2847 M07769_2.00.txt\n", "2848 M05780_2.00.txt\n", "2849 M07644_2.00.txt\n", "2850 M03232_2.00.txt\n", "2851 M00268_2.00.txt\n", "2852 M05519_2.00.txt\n", "2853 M05760_2.00.txt\n", "2854 M02800_2.00.txt\n", "2855 M02772_2.00.txt\n", "2856 M07799_2.00.txt\n", "2857 M09156_2.00.txt\n", "2858 M05390_2.00.txt\n", "2859 M00269_2.00.txt\n", "2860 M05620_2.00.txt\n", "2861 M04035_2.00.txt\n", "2862 M03002_2.00.txt\n", "2863 M00356_2.00.txt\n", "2864 M02666_2.00.txt\n", "2865 M04022_2.00.txt\n", "2866 M07815_2.00.txt\n", "2867 M07688_2.00.txt\n", "2868 M08111_2.00.txt\n", "2869 M08911_2.00.txt\n", "2870 M05339_2.00.txt\n", "2871 M04433_2.00.txt\n", "2872 M04907_2.00.txt\n", "2873 M04478_2.00.txt\n", "2874 M03504_2.00.txt\n", "2875 M05349_2.00.txt\n", "2876 M02440_2.00.txt\n", "2877 M02767_2.00.txt\n", "2878 M07613_2.00.txt\n", "2879 M09417_2.00.txt\n", "2880 M05120_2.00.txt\n", "2881 M03304_2.00.txt\n", "2882 M04105_2.00.txt\n", "2883 M03310_2.00.txt\n", "2884 M05539_2.00.txt\n", "2885 M04866_2.00.txt\n", "2886 M08400_2.00.txt\n", "2887 M08245_2.00.txt\n", "2888 M03325_2.00.txt\n", "2889 M05402_2.00.txt\n", "2890 M07632_2.00.txt\n", "2891 M08343_2.00.txt\n", "2892 M08871_2.00.txt\n", "2893 M05710_2.00.txt\n", "2894 M03577_2.00.txt\n", "2895 M08269_2.00.txt\n", "2896 M05746_2.00.txt\n", "2897 M03197_2.00.txt\n", "2898 M01978_2.00.txt\n", "2899 M00280_2.00.txt\n", "2900 M03030_2.00.txt\n", "2901 M07743_2.00.txt\n", "2902 M05245_2.00.txt\n", "2903 M04391_2.00.txt\n", "2904 M07683_2.00.txt\n", "2905 M01509_2.00.txt\n", "2906 M07978_2.00.txt\n", "2907 M05092_2.00.txt\n", "2908 M03191_2.00.txt\n", "2909 M08318_2.00.txt\n", "2910 M05009_2.00.txt\n", "2911 M09529_2.00.txt\n", "Motif M09529_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2912 M04624_2.00.txt\n", "2913 M08886_2.00.txt\n", "2914 M09634_2.00.txt\n", "Motif M09634_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2915 M07867_2.00.txt\n", "2916 M05526_2.00.txt\n", "2917 M04996_2.00.txt\n", "2918 M09490_2.00.txt\n", "2919 M05388_2.00.txt\n", "2920 M05509_2.00.txt\n", "2921 M04929_2.00.txt\n", "2922 M02665_2.00.txt\n", "2923 M08885_2.00.txt\n", "2924 M05481_2.00.txt\n", "2925 M04938_2.00.txt\n", "2926 M05173_2.00.txt\n", "2927 M05218_2.00.txt\n", "2928 M05799_2.00.txt\n", "2929 M04281_2.00.txt\n", "2930 M05292_2.00.txt\n", "2931 M04535_2.00.txt\n", "2932 M00300_2.00.txt\n", "2933 M07571_2.00.txt\n", "2934 M09142_2.00.txt\n", "2935 M03035_2.00.txt\n", "2936 M07981_2.00.txt\n", "2937 M09631_2.00.txt\n", "Motif M09631_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "2938 M05595_2.00.txt\n", "2939 M05651_2.00.txt\n", "2940 M05112_2.00.txt\n", "2941 M05600_2.00.txt\n", "2942 M05325_2.00.txt\n", "2943 M05776_2.00.txt\n", "2944 M07746_2.00.txt\n", "2945 M02999_2.00.txt\n", "2946 M05785_2.00.txt\n", "2947 M02929_2.00.txt\n", "2948 M04110_2.00.txt\n", "2949 M04660_2.00.txt\n", "2950 M07823_2.00.txt\n", "2951 M09064_2.00.txt\n", "2952 M05353_2.00.txt\n", "2953 M05234_2.00.txt\n", "2954 M04039_2.00.txt\n", "2955 M08336_2.00.txt\n", "2956 M03090_2.00.txt\n", "2957 M05165_2.00.txt\n", "2958 M08784_2.00.txt\n", "2959 M05546_2.00.txt\n", "2960 M01976_2.00.txt\n", "2961 M04740_2.00.txt\n", "2962 M02664_2.00.txt\n", "2963 M07884_2.00.txt\n", "2964 M04969_2.00.txt\n", "2965 M03206_2.00.txt\n", "2966 M03110_2.00.txt\n", "2967 M05727_2.00.txt\n", "2968 M05335_2.00.txt\n", "2969 M04635_2.00.txt\n", "2970 M05135_2.00.txt\n", "2971 M04348_2.00.txt\n", "2972 M09442_2.00.txt\n", "2973 M05333_2.00.txt\n", "2974 M05360_2.00.txt\n", "2975 M07758_2.00.txt\n", "2976 M05269_2.00.txt\n", "2977 M04120_2.00.txt\n", "2978 M02745_2.00.txt\n", "2979 M09145_2.00.txt\n", "2980 M03524_2.00.txt\n", "2981 M02734_2.00.txt\n", "2982 M03102_2.00.txt\n", "2983 M04681_2.00.txt\n", "2984 M08788_2.00.txt\n", "2985 M08156_2.00.txt\n", "2986 M05733_2.00.txt\n", "2987 M05608_2.00.txt\n", "2988 M03239_2.00.txt\n", "2989 M05217_2.00.txt\n", "2990 M07680_2.00.txt\n", "2991 M09216_2.00.txt\n", "2992 M09508_2.00.txt\n", "2993 M03080_2.00.txt\n", "2994 M04363_2.00.txt\n", "2995 M02811_2.00.txt\n", "2996 M03460_2.00.txt\n", "2997 M07681_2.00.txt\n", "2998 M00235_2.00.txt\n", "2999 M03566_2.00.txt\n", "3000 M08036_2.00.txt\n", "3001 M04230_2.00.txt\n", "3002 M08859_2.00.txt\n", "3003 M02904_2.00.txt\n", "3004 M05667_2.00.txt\n", "3005 M08712_2.00.txt\n", "3006 M03069_2.00.txt\n", "3007 M08066_2.00.txt\n", "3008 M05754_2.00.txt\n", "3009 M05027_2.00.txt\n", "3010 M03199_2.00.txt\n", "3011 M04894_2.00.txt\n", "3012 M04710_2.00.txt\n", "3013 M04747_2.00.txt\n", "3014 M07636_2.00.txt\n", "3015 M02974_2.00.txt\n", "3016 M07655_2.00.txt\n", "3017 M07979_2.00.txt\n", "3018 M07875_2.00.txt\n", "3019 M08920_2.00.txt\n", "3020 M02880_2.00.txt\n", "3021 M04384_2.00.txt\n", "3022 M07709_2.00.txt\n", "3023 M03505_2.00.txt\n", "3024 M05822_2.00.txt\n", "3025 M05768_2.00.txt\n", "3026 M04119_2.00.txt\n", "3027 M03237_2.00.txt\n", "3028 M08803_2.00.txt\n", "3029 M03449_2.00.txt\n", "3030 M04265_2.00.txt\n" ] }, { "name": "stdout", "output_type": "stream", "text": [ "3031 M08272_2.00.txt\n", "3032 M09623_2.00.txt\n", "Motif M09623_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3033 M05076_2.00.txt\n", "3034 M08227_2.00.txt\n", "3035 M08365_2.00.txt\n", "3036 M04485_2.00.txt\n", "3037 M05576_2.00.txt\n", "3038 M07860_2.00.txt\n", "3039 M05500_2.00.txt\n", "3040 M05559_2.00.txt\n", "3041 M00737_2.00.txt\n", "3042 M08934_2.00.txt\n", "3043 M04581_2.00.txt\n", "3044 M01508_2.00.txt\n", "3045 M03368_2.00.txt\n", "3046 M04282_2.00.txt\n", "3047 M05091_2.00.txt\n", "3048 M03169_2.00.txt\n", "3049 M05421_2.00.txt\n", "3050 M04086_2.00.txt\n", "3051 M03047_2.00.txt\n", "3052 M08059_2.00.txt\n", "3053 M04246_2.00.txt\n", "3054 M05551_2.00.txt\n", "3055 M05681_2.00.txt\n", "3056 M04220_2.00.txt\n", "3057 M02707_2.00.txt\n", "3058 M03578_2.00.txt\n", "3059 M05137_2.00.txt\n", "3060 M09363_2.00.txt\n", "3061 M07976_2.00.txt\n", "3062 M05346_2.00.txt\n", "3063 M03442_2.00.txt\n", "3064 M04711_2.00.txt\n", "3065 M02842_2.00.txt\n", "3066 M03104_2.00.txt\n", "3067 M04303_2.00.txt\n", "3068 M05158_2.00.txt\n", "3069 M05678_2.00.txt\n", "3070 M08802_2.00.txt\n", "3071 M00335_2.00.txt\n", "3072 M02764_2.00.txt\n", "3073 M03018_2.00.txt\n", "3074 M04531_2.00.txt\n", "3075 M00229_2.00.txt\n", "3076 M03482_2.00.txt\n", "3077 M08051_2.00.txt\n", "3078 M04724_2.00.txt\n", "3079 M04839_2.00.txt\n", "3080 M03041_2.00.txt\n", "3081 M00266_2.00.txt\n", "3082 M05175_2.00.txt\n", "3083 M05057_2.00.txt\n", "3084 M04513_2.00.txt\n", "3085 M04097_2.00.txt\n", "3086 M09238_2.00.txt\n", "3087 M00357_2.00.txt\n", "3088 M03050_2.00.txt\n", "3089 M09510_2.00.txt\n", "Motif M09510_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3090 M03160_2.00.txt\n", "3091 M08895_2.00.txt\n", "3092 M05260_2.00.txt\n", "3093 M05567_2.00.txt\n", "3094 M02740_2.00.txt\n", "3095 M07677_2.00.txt\n", "3096 M05407_2.00.txt\n", "3097 M05835_2.00.txt\n", "Motif M05835_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3098 M03487_2.00.txt\n", "3099 M00232_2.00.txt\n", "3100 M05794_2.00.txt\n", "3101 M05166_2.00.txt\n", "3102 M04082_2.00.txt\n", "3103 M03357_2.00.txt\n", "3104 M05801_2.00.txt\n", "3105 M03195_2.00.txt\n", "3106 M05580_2.00.txt\n", "3107 M04545_2.00.txt\n", "3108 M05008_2.00.txt\n", "3109 M04020_2.00.txt\n", "3110 M08870_2.00.txt\n", "3111 M07568_2.00.txt\n", "3112 M05389_2.00.txt\n", "3113 M05846_2.00.txt\n", "Motif M05846_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3114 M04322_2.00.txt\n", "3115 M08070_2.00.txt\n", "3116 M05452_2.00.txt\n", "3117 M08941_2.00.txt\n", "3118 M03521_2.00.txt\n", "3119 M05432_2.00.txt\n", "3120 M05318_2.00.txt\n", "3121 M03471_2.00.txt\n", "3122 M07612_2.00.txt\n", "3123 M07831_2.00.txt\n", "3124 M05782_2.00.txt\n", "3125 M09166_2.00.txt\n", "3126 M05101_2.00.txt\n", "3127 M04890_2.00.txt\n", "3128 M04342_2.00.txt\n", "3129 M07664_2.00.txt\n", "3130 M09506_2.00.txt\n", "3131 M08866_2.00.txt\n", "3132 M09251_2.00.txt\n", "3133 M07993_2.00.txt\n", "3134 M05853_2.00.txt\n", "Motif M05853_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3135 M04025_2.00.txt\n", "3136 M07904_2.00.txt\n", "3137 M03121_2.00.txt\n", "3138 M07906_2.00.txt\n", "3139 M04811_2.00.txt\n", "3140 M04719_2.00.txt\n", "3141 M05156_2.00.txt\n", "3142 M00309_2.00.txt\n", "3143 M05250_2.00.txt\n", "3144 M08208_2.00.txt\n", "3145 M04336_2.00.txt\n", "3146 M04311_2.00.txt\n", "3147 M04910_2.00.txt\n", "3148 M07690_2.00.txt\n", "3149 M07597_2.00.txt\n", "3150 M08176_2.00.txt\n", "3151 M00241_2.00.txt\n", "3152 M00286_2.00.txt\n", "3153 M07727_2.00.txt\n", "3154 M05051_2.00.txt\n", "3155 M04987_2.00.txt\n", "3156 M05457_2.00.txt\n", "3157 M05255_2.00.txt\n", "3158 M02441_2.00.txt\n", "3159 M03403_2.00.txt\n", "3160 M03046_2.00.txt\n", "3161 M05675_2.00.txt\n", "3162 M03503_2.00.txt\n", "3163 M04942_2.00.txt\n", "3164 M04657_2.00.txt\n", "3165 M07891_2.00.txt\n", "3166 M01849_2.00.txt\n", "3167 M09642_2.00.txt\n", "Motif M09642_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3168 M08742_2.00.txt\n", "3169 M02774_2.00.txt\n", "3170 M04952_2.00.txt\n", "3171 M09147_2.00.txt\n", "3172 M07564_2.00.txt\n", "3173 M09090_2.00.txt\n", "3174 M02729_2.00.txt\n", "3175 M08283_2.00.txt\n", "3176 M05239_2.00.txt\n", "3177 M04739_2.00.txt\n", "3178 M03388_2.00.txt\n", "3179 M03181_2.00.txt\n", "3180 M07694_2.00.txt\n", "3181 M08884_2.00.txt\n", "3182 M04674_2.00.txt\n", "3183 M05125_2.00.txt\n", "3184 M04193_2.00.txt\n", "3185 M08349_2.00.txt\n", "3186 M07697_2.00.txt\n", "3187 M03349_2.00.txt\n", "3188 M05387_2.00.txt\n", "3189 M04698_2.00.txt\n", "3190 M05414_2.00.txt\n", "3191 M04083_2.00.txt\n", "3192 M03005_2.00.txt\n", "3193 M04678_2.00.txt\n", "3194 M01499_2.00.txt\n", "3195 M04730_2.00.txt\n", "3196 M04406_2.00.txt\n", "3197 M03334_2.00.txt\n", "3198 M08154_2.00.txt\n", "3199 M04219_2.00.txt\n", "3200 M04716_2.00.txt\n", "3201 M07920_2.00.txt\n", "3202 M08217_2.00.txt\n", "3203 M03236_2.00.txt\n", "3204 M04501_2.00.txt\n", "3205 M07741_2.00.txt\n", "3206 M03210_2.00.txt\n", "3207 M08277_2.00.txt\n", "3208 M04029_2.00.txt\n", "3209 M07692_2.00.txt\n", "3210 M08219_2.00.txt\n", "3211 M04417_2.00.txt\n", "3212 M04250_2.00.txt\n", "3213 M05626_2.00.txt\n", "3214 M03333_2.00.txt\n", "3215 M07582_2.00.txt\n", "3216 M04743_2.00.txt\n", "3217 M04013_2.00.txt\n", "3218 M02943_2.00.txt\n", "3219 M05185_2.00.txt\n", "3220 M03049_2.00.txt\n", "3221 M04414_2.00.txt\n", "3222 M04199_2.00.txt\n", "3223 M05748_2.00.txt\n", "3224 M09484_2.00.txt\n", "3225 M04422_2.00.txt\n", "3226 M02899_2.00.txt\n", "3227 M01165_2.00.txt\n", "3228 M04745_2.00.txt\n", "3229 M03389_2.00.txt\n", "3230 M03557_2.00.txt\n", "3231 M09597_2.00.txt\n", "Motif M09597_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3232 M08713_2.00.txt\n", "3233 M07649_2.00.txt\n", "3234 M05214_2.00.txt\n", "3235 M02855_2.00.txt\n", "3236 M03405_2.00.txt\n", "3237 M08067_2.00.txt\n", "3238 M09159_2.00.txt\n", "3239 M07742_2.00.txt\n", "3240 M02825_2.00.txt\n", "3241 M03182_2.00.txt\n", "3242 M04068_2.00.txt\n", "3243 M03371_2.00.txt\n", "3244 M04138_2.00.txt\n", "3245 M09458_2.00.txt\n", "Motif M09458_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3246 M04195_2.00.txt\n", "3247 M04126_2.00.txt\n", "3248 M04355_2.00.txt\n", "3249 M05149_2.00.txt\n", "3250 M04076_2.00.txt\n", "3251 M04016_2.00.txt\n", "3252 M07922_2.00.txt\n", "3253 M03107_2.00.txt\n", "3254 M04131_2.00.txt\n", "3255 M03016_2.00.txt\n", "3256 M04229_2.00.txt\n", "3257 M08723_2.00.txt\n", "3258 M03367_2.00.txt\n", "3259 M08161_2.00.txt\n", "3260 M09531_2.00.txt\n", "3261 M07994_2.00.txt\n", "3262 M08190_2.00.txt\n", "3263 M03170_2.00.txt\n", "3264 M05779_2.00.txt\n", "3265 M04825_2.00.txt\n", "3266 M09621_2.00.txt\n", "Motif M09621_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3267 M08703_2.00.txt\n", "3268 M01259_2.00.txt\n", "3269 M00246_2.00.txt\n", "3270 M08890_2.00.txt\n", "3271 M05744_2.00.txt\n", "3272 M05355_2.00.txt\n", "3273 M05145_2.00.txt\n", "3274 M09293_2.00.txt\n", "3275 M02087_2.00.txt\n", "3276 M08958_2.00.txt\n", "3277 M08000_2.00.txt\n", "3278 M08120_2.00.txt\n", "3279 M03294_2.00.txt\n", "3280 M04203_2.00.txt\n", "3281 M08896_2.00.txt\n", "3282 M05438_2.00.txt\n", "3283 M03306_2.00.txt\n", "3284 M02988_2.00.txt\n", "3285 M05616_2.00.txt\n", "3286 M09029_2.00.txt\n", "3287 M08072_2.00.txt\n", "3288 M05046_2.00.txt\n", "3289 M08863_2.00.txt\n", "3290 M09085_2.00.txt\n", "3291 M03591_2.00.txt\n", "3292 M02096_2.00.txt\n", "3293 M04768_2.00.txt\n", "3294 M05786_2.00.txt\n", "3295 M03094_2.00.txt\n", "3296 M07853_2.00.txt\n", "3297 M04215_2.00.txt\n", "3298 M08715_2.00.txt\n", "3299 M05429_2.00.txt\n", "3300 M03099_2.00.txt\n", "3301 M09535_2.00.txt\n", "Motif M09535_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3302 M05762_2.00.txt\n", "3303 M04926_2.00.txt\n", "3304 M08943_2.00.txt\n", "3305 M02990_2.00.txt\n", "3306 M01203_2.00.txt\n", "3307 M07813_2.00.txt\n", "3308 M04466_2.00.txt\n", "3309 M05242_2.00.txt\n", "3310 M04279_2.00.txt\n", "3311 M08873_2.00.txt\n", "3312 M05300_2.00.txt\n", "3313 M08396_2.00.txt\n", "3314 M07865_2.00.txt\n", "3315 M04560_2.00.txt\n", "3316 M03339_2.00.txt\n", "3317 M02846_2.00.txt\n", "3318 M04570_2.00.txt\n", "3319 M05689_2.00.txt\n", "3320 M03209_2.00.txt\n", "3321 M09435_2.00.txt\n", "3322 M05679_2.00.txt\n", "3323 M09165_2.00.txt\n", "3324 M08149_2.00.txt\n", "3325 M07666_2.00.txt\n", "3326 M02779_2.00.txt\n", "3327 M05543_2.00.txt\n", "3328 M04171_2.00.txt\n", "3329 M05657_2.00.txt\n", "3330 M08134_2.00.txt\n", "3331 M02985_2.00.txt\n", "3332 M02773_2.00.txt\n", "3333 M08359_2.00.txt\n", "3334 M04717_2.00.txt\n", "3335 M09063_2.00.txt\n", "3336 M04956_2.00.txt\n", "3337 M08306_2.00.txt\n", "3338 M04204_2.00.txt\n", "3339 M09337_2.00.txt\n", "3340 M00299_2.00.txt\n", "3341 M02798_2.00.txt\n", "3342 M07980_2.00.txt\n", "3343 M00217_2.00.txt\n", "3344 M09278_2.00.txt\n", "3345 M02953_2.00.txt\n", "3346 M08930_2.00.txt\n", "3347 M05761_2.00.txt\n", "3348 M00221_2.00.txt\n", "3349 M09594_2.00.txt\n", "3350 M07953_2.00.txt\n", "3351 M05324_2.00.txt\n", "3352 M05391_2.00.txt\n", "3353 M05898_2.00.txt\n", "Motif M05898_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3354 M07575_2.00.txt\n", "3355 M00359_2.00.txt\n", "3356 M03299_2.00.txt\n", "3357 M08006_2.00.txt\n", "3358 M03106_2.00.txt\n", "3359 M03032_2.00.txt\n", "3360 M08329_2.00.txt\n", "3361 M08109_2.00.txt\n", "3362 M09432_2.00.txt\n", "3363 M05894_2.00.txt\n", "Motif M05894_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3364 M03445_2.00.txt\n", "3365 M09427_2.00.txt\n", "3366 M05563_2.00.txt\n", "3367 M04741_2.00.txt\n", "3368 M05767_2.00.txt\n", "3369 M08898_2.00.txt\n", "3370 M04409_2.00.txt\n", "3371 M05098_2.00.txt\n", "3372 M09625_2.00.txt\n", "Motif M09625_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3373 M05338_2.00.txt\n", "3374 M07679_2.00.txt\n", "3375 M05531_2.00.txt\n", "3376 M04976_2.00.txt\n", "3377 M03079_2.00.txt\n", "3378 M05317_2.00.txt\n", "3379 M04834_2.00.txt\n", "3380 M00320_2.00.txt\n", "3381 M08737_2.00.txt\n", "3382 M07970_2.00.txt\n", "3383 M04769_2.00.txt\n", "3384 M09488_2.00.txt\n", "3385 M00296_2.00.txt\n", "3386 M04428_2.00.txt\n", "3387 M05841_2.00.txt\n", "Motif M05841_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3388 M02949_2.00.txt\n", "3389 M08315_2.00.txt\n", "3390 M05582_2.00.txt\n", "3391 M08729_2.00.txt\n", "3392 M03141_2.00.txt\n", "3393 M04642_2.00.txt\n", "3394 M04502_2.00.txt\n", "3395 M05827_2.00.txt\n" ] }, { "name": "stdout", "output_type": "stream", "text": [ "3396 M08716_2.00.txt\n", "3397 M07775_2.00.txt\n", "3398 M03095_2.00.txt\n", "3399 M04693_2.00.txt\n", "3400 M05472_2.00.txt\n", "3401 M02645_2.00.txt\n", "Motif M02645_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3402 M00248_2.00.txt\n", "3403 M07614_2.00.txt\n", "3404 M04842_2.00.txt\n", "3405 M04828_2.00.txt\n", "3406 M04574_2.00.txt\n", "3407 M09094_2.00.txt\n", "3408 M07851_2.00.txt\n", "3409 M05329_2.00.txt\n", "3410 M05337_2.00.txt\n", "3411 M09605_2.00.txt\n", "Motif M09605_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3412 M05555_2.00.txt\n", "3413 M05176_2.00.txt\n", "3414 M05286_2.00.txt\n", "3415 M03559_2.00.txt\n", "3416 M02711_2.00.txt\n", "3417 M07572_2.00.txt\n", "3418 M09098_2.00.txt\n", "3419 M05533_2.00.txt\n", "3420 M00298_2.00.txt\n", "3421 M04133_2.00.txt\n", "3422 M08881_2.00.txt\n", "3423 M07838_2.00.txt\n", "3424 M07898_2.00.txt\n", "3425 M04319_2.00.txt\n", "3426 M03336_2.00.txt\n", "3427 M04370_2.00.txt\n", "3428 M04198_2.00.txt\n", "3429 M04374_2.00.txt\n", "3430 M02903_2.00.txt\n", "3431 M04473_2.00.txt\n", "3432 M03560_2.00.txt\n", "3433 M08261_2.00.txt\n", "3434 M01912_2.00.txt\n", "3435 M05110_2.00.txt\n", "3436 M09084_2.00.txt\n", "3437 M07650_2.00.txt\n", "3438 M03148_2.00.txt\n", "3439 M04393_2.00.txt\n", "3440 M09031_2.00.txt\n", "3441 M07773_2.00.txt\n", "3442 M05221_2.00.txt\n", "3443 M08092_2.00.txt\n", "3444 M04752_2.00.txt\n", "3445 M08035_2.00.txt\n", "3446 M07605_2.00.txt\n", "3447 M09608_2.00.txt\n", "Motif M09608_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3448 M02691_2.00.txt\n", "3449 M04375_2.00.txt\n", "3450 M07762_2.00.txt\n", "3451 M02910_2.00.txt\n", "3452 M05640_2.00.txt\n", "3453 M04483_2.00.txt\n", "3454 M04331_2.00.txt\n", "3455 M02965_2.00.txt\n", "3456 M04945_2.00.txt\n", "3457 M08297_2.00.txt\n", "3458 M05409_2.00.txt\n", "3459 M07788_2.00.txt\n", "3460 M00293_2.00.txt\n", "3461 M02969_2.00.txt\n", "3462 M04792_2.00.txt\n", "3463 M03376_2.00.txt\n", "3464 M08157_2.00.txt\n", "3465 M09034_2.00.txt\n", "3466 M08874_2.00.txt\n", "3467 M00282_2.00.txt\n", "3468 M04286_2.00.txt\n", "3469 M04456_2.00.txt\n", "3470 M05345_2.00.txt\n", "3471 M07722_2.00.txt\n", "3472 M00337_2.00.txt\n", "3473 M08049_2.00.txt\n", "3474 M04140_2.00.txt\n", "3475 M05557_2.00.txt\n", "3476 M04878_2.00.txt\n", "3477 M05534_2.00.txt\n", "3478 M03387_2.00.txt\n", "3479 M07960_2.00.txt\n", "3480 M05628_2.00.txt\n", "3481 M05503_2.00.txt\n", "3482 M07914_2.00.txt\n", "3483 M04113_2.00.txt\n", "3484 M05114_2.00.txt\n", "3485 M04787_2.00.txt\n", "3486 M04484_2.00.txt\n", "3487 M04143_2.00.txt\n", "3488 M00253_2.00.txt\n", "3489 M07964_2.00.txt\n", "3490 M04968_2.00.txt\n", "3491 M02771_2.00.txt\n", "3492 M08848_2.00.txt\n", "3493 M02961_2.00.txt\n", "3494 M07771_2.00.txt\n", "3495 M09148_2.00.txt\n", "3496 M04889_2.00.txt\n", "3497 M05451_2.00.txt\n", "3498 M08265_2.00.txt\n", "3499 M08786_2.00.txt\n", "3500 M07952_2.00.txt\n", "3501 M08923_2.00.txt\n", "3502 M05001_2.00.txt\n", "3503 M05410_2.00.txt\n", "3504 M05085_2.00.txt\n", "3505 M05674_2.00.txt\n", "3506 M04232_2.00.txt\n", "3507 M04292_2.00.txt\n", "3508 M05554_2.00.txt\n", "3509 M04224_2.00.txt\n", "3510 M08236_2.00.txt\n", "3511 M04580_2.00.txt\n", "3512 M00223_2.00.txt\n", "3513 M00377_2.00.txt\n", "3514 M03564_2.00.txt\n", "3515 M07586_2.00.txt\n", "3516 M05641_2.00.txt\n", "3517 M02952_2.00.txt\n", "3518 M04593_2.00.txt\n", "3519 M04776_2.00.txt\n", "3520 M04584_2.00.txt\n", "3521 M04114_2.00.txt\n", "3522 M04993_2.00.txt\n", "3523 M09234_2.00.txt\n", "3524 M05169_2.00.txt\n", "3525 M04287_2.00.txt\n", "3526 M07590_2.00.txt\n", "3527 M00985_2.00.txt\n", "3528 M05252_2.00.txt\n", "3529 M07685_2.00.txt\n", "3530 M09256_2.00.txt\n", "3531 M04070_2.00.txt\n", "3532 M03081_2.00.txt\n", "3533 M04340_2.00.txt\n", "3534 M05383_2.00.txt\n", "3535 M09501_2.00.txt\n", "Motif M09501_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3536 M05254_2.00.txt\n", "3537 M09049_2.00.txt\n", "3538 M03028_2.00.txt\n", "3539 M09295_2.00.txt\n", "3540 M05104_2.00.txt\n", "3541 M07761_2.00.txt\n", "3542 M04435_2.00.txt\n", "3543 M04347_2.00.txt\n", "3544 M08882_2.00.txt\n", "3545 M07928_2.00.txt\n", "3546 M07574_2.00.txt\n", "3547 M04233_2.00.txt\n", "3548 M07803_2.00.txt\n", "3549 M07640_2.00.txt\n", "3550 M05530_2.00.txt\n", "3551 M04723_2.00.txt\n", "3552 M08091_2.00.txt\n", "3553 M05763_2.00.txt\n", "3554 M05709_2.00.txt\n", "3555 M05547_2.00.txt\n", "3556 M07840_2.00.txt\n", "3557 M05816_2.00.txt\n", "3558 M05163_2.00.txt\n", "3559 M08388_2.00.txt\n", "3560 M04692_2.00.txt\n", "3561 M04679_2.00.txt\n", "3562 M08385_2.00.txt\n", "3563 M04376_2.00.txt\n", "3564 M08710_2.00.txt\n", "3565 M07863_2.00.txt\n", "3566 M04731_2.00.txt\n", "3567 M04631_2.00.txt\n", "3568 M05004_2.00.txt\n", "3569 M05035_2.00.txt\n", "3570 M08321_2.00.txt\n", "3571 M04801_2.00.txt\n", "3572 M05823_2.00.txt\n", "3573 M08243_2.00.txt\n", "3574 M09048_2.00.txt\n", "3575 M04411_2.00.txt\n", "3576 M05777_2.00.txt\n", "3577 M03548_2.00.txt\n", "3578 M05180_2.00.txt\n", "3579 M07723_2.00.txt\n", "3580 M02881_2.00.txt\n", "3581 M05020_2.00.txt\n", "3582 M07740_2.00.txt\n", "3583 M02793_2.00.txt\n", "3584 M04284_2.00.txt\n", "3585 M09131_2.00.txt\n", "3586 M04447_2.00.txt\n", "3587 M09230_2.00.txt\n", "3588 M08028_2.00.txt\n", "3589 M05336_2.00.txt\n", "3590 M07674_2.00.txt\n", "3591 M04504_2.00.txt\n", "3592 M03326_2.00.txt\n", "3593 M04786_2.00.txt\n", "3594 M07606_2.00.txt\n", "3595 M05636_2.00.txt\n", "3596 M09543_2.00.txt\n", "3597 M03295_2.00.txt\n", "3598 M07696_2.00.txt\n", "3599 M00321_2.00.txt\n", "3600 M08301_2.00.txt\n", "3601 M07793_2.00.txt\n", "3602 M05468_2.00.txt\n", "3603 M03385_2.00.txt\n", "3604 M03037_2.00.txt\n", "3605 M04256_2.00.txt\n", "3606 M08018_2.00.txt\n", "3607 M05669_2.00.txt\n", "3608 M05742_2.00.txt\n", "3609 M04162_2.00.txt\n", "3610 M02086_2.00.txt\n", "3611 M04080_2.00.txt\n", "3612 M07707_2.00.txt\n", "3613 M08931_2.00.txt\n", "3614 M04903_2.00.txt\n", "3615 M05728_2.00.txt\n", "3616 M05330_2.00.txt\n", "3617 M07871_2.00.txt\n", "3618 M07874_2.00.txt\n", "3619 M03328_2.00.txt\n", "3620 M04629_2.00.txt\n", "3621 M05229_2.00.txt\n", "3622 M08237_2.00.txt\n", "3623 M02930_2.00.txt\n", "3624 M03379_2.00.txt\n", "3625 M04302_2.00.txt\n", "3626 M05281_2.00.txt\n", "3627 M07700_2.00.txt\n", "3628 M04321_2.00.txt\n", "3629 M07583_2.00.txt\n", "3630 M05326_2.00.txt\n", "3631 M04139_2.00.txt\n", "3632 M04124_2.00.txt\n", "3633 M03392_2.00.txt\n", "3634 M03412_2.00.txt\n", "3635 M04649_2.00.txt\n", "3636 M05048_2.00.txt\n", "3637 M07856_2.00.txt\n", "3638 M04278_2.00.txt\n", "3639 M05047_2.00.txt\n", "3640 M03546_2.00.txt\n", "3641 M07882_2.00.txt\n", "3642 M04089_2.00.txt\n", "3643 M03100_2.00.txt\n", "3644 M04037_2.00.txt\n", "3645 M02828_2.00.txt\n", "3646 M00839_2.00.txt\n", "3647 M05241_2.00.txt\n", "3648 M04784_2.00.txt\n", "3649 M04183_2.00.txt\n", "3650 M08960_2.00.txt\n", "3651 M05766_2.00.txt\n", "3652 M07982_2.00.txt\n", "3653 M02909_2.00.txt\n", "3654 M05249_2.00.txt\n", "3655 M08299_2.00.txt\n", "3656 M04628_2.00.txt\n", "3657 M07593_2.00.txt\n", "3658 M04465_2.00.txt\n", "3659 M05029_2.00.txt\n", "3660 M04288_2.00.txt\n", "3661 M04778_2.00.txt\n", "3662 M05151_2.00.txt\n", "3663 M07918_2.00.txt\n", "3664 M04881_2.00.txt\n", "3665 M05895_2.00.txt\n", "Motif M05895_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3666 M02776_2.00.txt\n", "3667 M05698_2.00.txt\n", "3668 M04846_2.00.txt\n", "3669 M05032_2.00.txt\n", "3670 M05378_2.00.txt\n", "3671 M05842_2.00.txt\n", "Motif M05842_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3672 M07938_2.00.txt\n", "3673 M03475_2.00.txt\n", "3674 M05290_2.00.txt\n", "3675 M02753_2.00.txt\n", "3676 M07931_2.00.txt\n", "3677 M03108_2.00.txt\n", "3678 M05251_2.00.txt\n", "3679 M05874_2.00.txt\n", "Motif M05874_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3680 M07589_2.00.txt\n", "3681 M07717_2.00.txt\n", "3682 M07933_2.00.txt\n", "3683 M03001_2.00.txt\n", "3684 M05030_2.00.txt\n", "3685 M05022_2.00.txt\n", "3686 M05553_2.00.txt\n", "3687 M05518_2.00.txt\n", "3688 M03003_2.00.txt\n", "3689 M05631_2.00.txt\n", "3690 M09057_2.00.txt\n", "3691 M08152_2.00.txt\n", "3692 M00328_2.00.txt\n", "3693 M02826_2.00.txt\n", "3694 M04310_2.00.txt\n", "3695 M08383_2.00.txt\n", "3696 M04045_2.00.txt\n", "3697 M04999_2.00.txt\n", "3698 M01510_2.00.txt\n", "3699 M08949_2.00.txt\n", "3700 M04271_2.00.txt\n", "3701 M03096_2.00.txt\n", "3702 M04767_2.00.txt\n", "3703 M04967_2.00.txt\n", "3704 M05439_2.00.txt\n", "3705 M00739_2.00.txt\n", "3706 M05306_2.00.txt\n", "3707 M02875_2.00.txt\n", "3708 M02925_2.00.txt\n", "3709 M03369_2.00.txt\n", "3710 M04962_2.00.txt\n", "3711 M03382_2.00.txt\n", "3712 M04625_2.00.txt\n", "3713 M05133_2.00.txt\n", "3714 M02832_2.00.txt\n", "3715 M03352_2.00.txt\n", "3716 M09380_2.00.txt\n", "3717 M02847_2.00.txt\n", "3718 M05289_2.00.txt\n", "3719 M03925_2.00.txt\n", "3720 M04873_2.00.txt\n", "3721 M02744_2.00.txt\n", "3722 M04052_2.00.txt\n", "3723 M07591_2.00.txt\n", "3724 M05690_2.00.txt\n", "3725 M05666_2.00.txt\n", "3726 M05261_2.00.txt\n", "3727 M02841_2.00.txt\n", "3728 M01008_2.00.txt\n", "3729 M05583_2.00.txt\n", "3730 M00310_2.00.txt\n", "3731 M07551_2.00.txt\n", "3732 M04182_2.00.txt\n", "3733 M02955_2.00.txt\n", "3734 M07703_2.00.txt\n", "3735 M00291_2.00.txt\n", "3736 M05153_2.00.txt\n", "3737 M03238_2.00.txt\n", "3738 M08861_2.00.txt\n", "3739 M05019_2.00.txt\n", "3740 M08341_2.00.txt\n", "3741 M02460_2.00.txt\n", "3742 M04567_2.00.txt\n", "3743 M00251_2.00.txt\n", "3744 M03360_2.00.txt\n", "3745 M07691_2.00.txt\n", "3746 M07721_2.00.txt\n", "3747 M00285_2.00.txt\n", "3748 M04337_2.00.txt\n", "3749 M04676_2.00.txt\n", "3750 M02843_2.00.txt\n", "3751 M05499_2.00.txt\n", "3752 M02840_2.00.txt\n", "3753 M02787_2.00.txt\n", "3754 M07849_2.00.txt\n", "3755 M02756_2.00.txt\n", "3756 M08399_2.00.txt\n", "3757 M05393_2.00.txt\n", "3758 M01512_2.00.txt\n", "3759 M09440_2.00.txt\n", "3760 M08140_2.00.txt\n", "3761 M04144_2.00.txt\n", "3762 M05565_2.00.txt\n", "3763 M04565_2.00.txt\n", "3764 M07951_2.00.txt\n" ] }, { "name": "stdout", "output_type": "stream", "text": [ "3765 M08181_2.00.txt\n", "3766 M04091_2.00.txt\n", "3767 M03006_2.00.txt\n", "3768 M02083_2.00.txt\n", "3769 M09266_2.00.txt\n", "3770 M07826_2.00.txt\n", "3771 M04656_2.00.txt\n", "3772 M03575_2.00.txt\n", "3773 M04525_2.00.txt\n", "3774 M05747_2.00.txt\n", "3775 M07756_2.00.txt\n", "3776 M02733_2.00.txt\n", "3777 M05433_2.00.txt\n", "3778 M05201_2.00.txt\n", "3779 M05450_2.00.txt\n", "3780 M04152_2.00.txt\n", "3781 M02857_2.00.txt\n", "3782 M08375_2.00.txt\n", "3783 M09247_2.00.txt\n", "3784 M00273_2.00.txt\n", "3785 M05521_2.00.txt\n", "3786 M05720_2.00.txt\n", "3787 M02856_2.00.txt\n", "3788 M07992_2.00.txt\n", "3789 M05506_2.00.txt\n", "3790 M04851_2.00.txt\n", "3791 M05205_2.00.txt\n", "3792 M08358_2.00.txt\n", "3793 M04510_2.00.txt\n", "3794 M04266_2.00.txt\n", "3795 M04071_2.00.txt\n", "3796 M04963_2.00.txt\n", "3797 M07731_2.00.txt\n", "3798 M05825_2.00.txt\n", "3799 M08247_2.00.txt\n", "3800 M04696_2.00.txt\n", "3801 M05373_2.00.txt\n", "3802 M07652_2.00.txt\n", "3803 M08856_2.00.txt\n", "3804 M05703_2.00.txt\n", "3805 M08395_2.00.txt\n", "3806 M07868_2.00.txt\n", "3807 M03342_2.00.txt\n", "3808 M09600_2.00.txt\n", "3809 M04615_2.00.txt\n", "3810 M04451_2.00.txt\n", "3811 M09542_2.00.txt\n", "Motif M09542_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3812 M04519_2.00.txt\n", "3813 M02878_2.00.txt\n", "3814 M05497_2.00.txt\n", "3815 M04452_2.00.txt\n", "3816 M04429_2.00.txt\n", "3817 M05119_2.00.txt\n", "3818 M07827_2.00.txt\n", "3819 M04960_2.00.txt\n", "3820 M04971_2.00.txt\n", "3821 M02983_2.00.txt\n", "3822 M01505_2.00.txt\n", "3823 M08185_2.00.txt\n", "3824 M08353_2.00.txt\n", "3825 M09460_2.00.txt\n", "3826 M07714_2.00.txt\n", "3827 M05824_2.00.txt\n", "3828 M07602_2.00.txt\n", "3829 M05793_2.00.txt\n", "3830 M03523_2.00.txt\n", "3831 M05891_2.00.txt\n", "Motif M05891_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3832 M05498_2.00.txt\n", "3833 M02950_2.00.txt\n", "3834 M05830_2.00.txt\n", "3835 M05039_2.00.txt\n", "3836 M05638_2.00.txt\n", "3837 M08085_2.00.txt\n", "3838 M05524_2.00.txt\n", "3839 M05704_2.00.txt\n", "3840 M04777_2.00.txt\n", "3841 M05394_2.00.txt\n", "3842 M04966_2.00.txt\n", "3843 M08285_2.00.txt\n", "3844 M05299_2.00.txt\n", "3845 M08398_2.00.txt\n", "3846 M03415_2.00.txt\n", "3847 M05412_2.00.txt\n", "3848 M04579_2.00.txt\n", "3849 M04892_2.00.txt\n", "3850 M04536_2.00.txt\n", "3851 M05162_2.00.txt\n", "3852 M05380_2.00.txt\n", "3853 M09592_2.00.txt\n", "Motif M09592_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3854 M04030_2.00.txt\n", "3855 M09522_2.00.txt\n", "Motif M09522_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3856 M03215_2.00.txt\n", "3857 M09536_2.00.txt\n", "Motif M09536_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3858 M04912_2.00.txt\n", "3859 M08851_2.00.txt\n", "3860 M05756_2.00.txt\n", "3861 M07739_2.00.txt\n", "3862 M05467_2.00.txt\n", "3863 M08912_2.00.txt\n", "3864 M02844_2.00.txt\n", "3865 M04238_2.00.txt\n", "3866 M08887_2.00.txt\n", "3867 M05270_2.00.txt\n", "3868 M08087_2.00.txt\n", "3869 M07818_2.00.txt\n", "3870 M09560_2.00.txt\n", "Motif M09560_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3871 M03515_2.00.txt\n", "3872 M04470_2.00.txt\n", "3873 M01026_2.00.txt\n", "3874 M05017_2.00.txt\n", "3875 M04564_2.00.txt\n", "3876 M07935_2.00.txt\n", "3877 M02775_2.00.txt\n", "3878 M05831_2.00.txt\n", "Motif M05831_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3879 M05800_2.00.txt\n", "3880 M03243_2.00.txt\n", "3881 M02750_2.00.txt\n", "3882 M04874_2.00.txt\n", "3883 M05358_2.00.txt\n", "3884 M04990_2.00.txt\n", "3885 M05594_2.00.txt\n", "3886 M05419_2.00.txt\n", "3887 M05875_2.00.txt\n", "Motif M05875_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3888 M05815_2.00.txt\n", "3889 M08093_2.00.txt\n", "3890 M08945_2.00.txt\n", "3891 M04877_2.00.txt\n", "3892 M05896_2.00.txt\n", "Motif M05896_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3893 M02705_2.00.txt\n", "3894 M07929_2.00.txt\n", "3895 M05769_2.00.txt\n", "3896 M04371_2.00.txt\n", "3897 M05248_2.00.txt\n", "3898 M04951_2.00.txt\n", "3899 M04190_2.00.txt\n", "3900 M05659_2.00.txt\n", "3901 M05684_2.00.txt\n", "3902 M05319_2.00.txt\n", "3903 M05200_2.00.txt\n", "3904 M03502_2.00.txt\n", "3905 M07600_2.00.txt\n", "3906 M07673_2.00.txt\n", "3907 M04239_2.00.txt\n", "3908 M07808_2.00.txt\n", "3909 M04305_2.00.txt\n", "3910 M04563_2.00.txt\n", "3911 M05802_2.00.txt\n", "3912 M08119_2.00.txt\n", "3913 M09137_2.00.txt\n", "3914 M01977_2.00.txt\n", "3915 M05619_2.00.txt\n", "3916 M09051_2.00.txt\n", "3917 M03157_2.00.txt\n", "3918 M05840_2.00.txt\n", "Motif M05840_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3919 M08380_2.00.txt\n", "3920 M04920_2.00.txt\n", "3921 M08104_2.00.txt\n", "3922 M09272_2.00.txt\n", "3923 M03886_2.00.txt\n", "3924 M05059_2.00.txt\n", "3925 M08016_2.00.txt\n", "3926 M03407_2.00.txt\n", "3927 M07784_2.00.txt\n", "3928 M03176_2.00.txt\n", "3929 M03139_2.00.txt\n", "3930 M05852_2.00.txt\n", "3931 M01504_2.00.txt\n", "3932 M04587_2.00.txt\n", "3933 M07809_2.00.txt\n", "3934 M04761_2.00.txt\n", "3935 M04606_2.00.txt\n", "3936 M08807_2.00.txt\n", "3937 M07996_2.00.txt\n", "3938 M08736_2.00.txt\n", "3939 M01498_2.00.txt\n", "3940 M04360_2.00.txt\n", "3941 M07949_2.00.txt\n", "3942 M07839_2.00.txt\n", "3943 M03147_2.00.txt\n", "3944 M09561_2.00.txt\n", "3945 M02797_2.00.txt\n", "3946 M04677_2.00.txt\n", "3947 M03212_2.00.txt\n", "3948 M07921_2.00.txt\n", "3949 M07807_2.00.txt\n", "3950 M04607_2.00.txt\n", "3951 M02678_2.00.txt\n", "3952 M05740_2.00.txt\n", "3953 M04185_2.00.txt\n", "3954 M04944_2.00.txt\n", "3955 M05670_2.00.txt\n", "3956 M08282_2.00.txt\n", "3957 M02900_2.00.txt\n", "3958 M04390_2.00.txt\n", "3959 M00279_2.00.txt\n", "3960 M04583_2.00.txt\n", "3961 M05745_2.00.txt\n", "3962 M04875_2.00.txt\n", "3963 M04959_2.00.txt\n", "3964 M05749_2.00.txt\n", "3965 M02833_2.00.txt\n", "3966 M09485_2.00.txt\n", "Motif M09485_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3967 M08893_2.00.txt\n", "3968 M00227_2.00.txt\n", "3969 M00261_2.00.txt\n", "3970 M04655_2.00.txt\n", "3971 M03220_2.00.txt\n", "3972 M09386_2.00.txt\n", "3973 M07912_2.00.txt\n", "3974 M04605_2.00.txt\n", "3975 M05078_2.00.txt\n", "3976 M05897_2.00.txt\n", "Motif M05897_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "3977 M05392_2.00.txt\n", "3978 M05654_2.00.txt\n", "3979 M03511_2.00.txt\n", "3980 M07604_2.00.txt\n", "3981 M04863_2.00.txt\n", "3982 M04644_2.00.txt\n", "3983 M02838_2.00.txt\n", "3984 M08345_2.00.txt\n", "3985 M02396_2.00.txt\n", "3986 M05477_2.00.txt\n", "3987 M08355_2.00.txt\n", "3988 M08360_2.00.txt\n", "3989 M04699_2.00.txt\n", "3990 M03174_2.00.txt\n", "3991 M04009_2.00.txt\n", "3992 M04619_2.00.txt\n", "3993 M03458_2.00.txt\n", "3994 M04578_2.00.txt\n", "3995 M04904_2.00.txt\n", "3996 M00987_2.00.txt\n", "3997 M04148_2.00.txt\n", "3998 M04011_2.00.txt\n", "3999 M04954_2.00.txt\n", "4000 M02924_2.00.txt\n", "4001 M08899_2.00.txt\n", "4002 M07806_2.00.txt\n", "4003 M05105_2.00.txt\n", "4004 M04490_2.00.txt\n", "4005 M04090_2.00.txt\n", "4006 M02663_2.00.txt\n", "4007 M03513_2.00.txt\n", "4008 M05086_2.00.txt\n", "4009 M07957_2.00.txt\n", "4010 M04982_2.00.txt\n", "4011 M04837_2.00.txt\n", "4012 M03396_2.00.txt\n", "4013 M04413_2.00.txt\n", "4014 M05064_2.00.txt\n", "4015 M05858_2.00.txt\n", "Motif M05858_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "4016 M04632_2.00.txt\n", "4017 M04544_2.00.txt\n", "4018 M04887_2.00.txt\n", "4019 M08722_2.00.txt\n", "4020 M07791_2.00.txt\n", "4021 M03494_2.00.txt\n", "4022 M03172_2.00.txt\n", "4023 M04950_2.00.txt\n", "4024 M03923_2.00.txt\n", "4025 M08952_2.00.txt\n", "4026 M08071_2.00.txt\n", "4027 M09604_2.00.txt\n", "Motif M09604_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "4028 M08942_2.00.txt\n", "4029 M05106_2.00.txt\n", "4030 M07927_2.00.txt\n", "4031 M03014_2.00.txt\n", "4032 M11491_2.00.txt\n", "4033 M00317_2.00.txt\n", "4034 M04275_2.00.txt\n", "4035 M04369_2.00.txt\n", "4036 M03071_2.00.txt\n", "4037 M07958_2.00.txt\n", "4038 M05723_2.00.txt\n", "4039 M04145_2.00.txt\n", "4040 M04814_2.00.txt\n", "4041 M00274_2.00.txt\n", "4042 M08125_2.00.txt\n", "4043 M07903_2.00.txt\n", "4044 M07930_2.00.txt\n", "4045 M00254_2.00.txt\n", "4046 M04650_2.00.txt\n", "4047 M03501_2.00.txt\n", "4048 M09229_2.00.txt\n", "4049 M05359_2.00.txt\n", "4050 M04514_2.00.txt\n", "4051 M02956_2.00.txt\n", "4052 M08142_2.00.txt\n", "4053 M04368_2.00.txt\n", "4054 M04738_2.00.txt\n", "4055 M04044_2.00.txt\n", "4056 M05686_2.00.txt\n", "4057 M05587_2.00.txt\n", "4058 M01927_2.00.txt\n", "4059 M04343_2.00.txt\n", "4060 M05711_2.00.txt\n", "4061 M04822_2.00.txt\n", "4062 M05011_2.00.txt\n", "4063 M04421_2.00.txt\n", "4064 M07638_2.00.txt\n", "4065 M07821_2.00.txt\n", "4066 M04468_2.00.txt\n", "4067 M04318_2.00.txt\n", "4068 M09454_2.00.txt\n", "4069 M03581_2.00.txt\n", "4070 M08858_2.00.txt\n", "4071 M05171_2.00.txt\n", "4072 M05717_2.00.txt\n", "4073 M08228_2.00.txt\n", "4074 M04434_2.00.txt\n", "4075 M05130_2.00.txt\n", "4076 M04404_2.00.txt\n", "4077 M00247_2.00.txt\n", "4078 M03201_2.00.txt\n", "4079 M05775_2.00.txt\n", "4080 M04764_2.00.txt\n", "4081 M00305_2.00.txt\n", "4082 M02731_2.00.txt\n", "4083 M05313_2.00.txt\n", "4084 M04389_2.00.txt\n", "4085 M00237_2.00.txt\n", "4086 M03324_2.00.txt\n", "4087 M02954_2.00.txt\n", "4088 M03097_2.00.txt\n", "4089 M07798_2.00.txt\n", "4090 M05072_2.00.txt\n", "4091 M02822_2.00.txt\n", "4092 M08910_2.00.txt\n", "4093 M05211_2.00.txt\n" ] }, { "name": "stdout", "output_type": "stream", "text": [ "4094 M09139_2.00.txt\n", "4095 M04397_2.00.txt\n", "4096 M05033_2.00.txt\n", "4097 M09033_2.00.txt\n", "4098 M05646_2.00.txt\n", "4099 M03397_2.00.txt\n", "4100 M05656_2.00.txt\n", "4101 M02727_2.00.txt\n", "4102 M01113_2.00.txt\n", "4103 M04353_2.00.txt\n", "4104 M00329_2.00.txt\n", "4105 M04594_2.00.txt\n", "4106 M04430_2.00.txt\n", "4107 M04109_2.00.txt\n", "4108 M04687_2.00.txt\n", "4109 M05424_2.00.txt\n", "4110 M03183_2.00.txt\n", "4111 M03184_2.00.txt\n", "4112 M03155_2.00.txt\n", "4113 M03573_2.00.txt\n", "4114 M04416_2.00.txt\n", "4115 M00240_2.00.txt\n", "4116 M09632_2.00.txt\n", "Motif M09632_2.00 warning: some rows do not sum up to 1 within 1e-3 absolute and relative precision\n", "4117 M04735_2.00.txt\n", "4118 M05490_2.00.txt\n", "4119 M04087_2.00.txt\n", "4120 M09349_2.00.txt\n", "4121 M05044_2.00.txt\n", "4122 M04943_2.00.txt\n", "4123 M09362_2.00.txt\n", "4124 M08883_2.00.txt\n" ] } ], "source": [ "motifs_selected.remove('M05847_2.00')\n", "cisbp_pwms_stats = cisbp_to_meme(pmws_cisbp_path=pwms_cisbp_path, motifs_selected=motifs_selected, outfile_path= os.path.join(project_rootdir, 'pwms_MEME/pwms_cisbp_meme.txt'))" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "## Testing the integrity of the new PWM file" ] }, { "cell_type": "code", "execution_count": 209, "metadata": {}, "outputs": [], "source": [ "# Running a test instance of FIMO:\n", "os.chdir(project_rootdir)\n", "os.system('fimo pwms_MEME/pwms_cisbp_meme.txt test_fimo/test_sequence.fa')\n", "os.chdir(os.path.join(project_rootdir, 'notebooks'))" ] }, { "cell_type": "code", "execution_count": 210, "metadata": {}, "outputs": [ { "data": { "text/html": [ "
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motif_idmotif_alt_idsequence_namestartstopstrandscorep-valueq-valuematched_sequence
0M09096_2.00NaNrandom984.0996.0+17.90002.290000e-080.000045cAAAGTAAACAAG
1M08117_2.00NaNrandom984.0998.0-17.46463.120000e-080.000062CCCTTGTTTACTTTG
2M09090_2.00NaNrandom983.0994.0+16.91098.340000e-080.000165ccAAAGTAAACA
3M07960_2.00NaNrandom982.0996.0+17.09001.420000e-070.000280tccAAAGTAAACAAG
4M07959_2.00NaNrandom983.0997.0+16.04001.490000e-070.000295ccAAAGTAAACAAGG
.................................
1251M04748_2.00NaNrandom779.0790.0+10.79599.950000e-050.194000gaaccggaactc
1252M09115_2.00NaNrandom11.029.0+10.68379.990000e-050.196000GTTTACTTTcgtgataagg
1253# FIMO (Find Individual Motif Occurrences): Ve...NaNNaNNaNNaNNaNNaNNaNNaNNaN
1254# The format of this file is described at http...NaNNaNNaNNaNNaNNaNNaNNaNNaN
1255# fimo pwms_MEME/pwms_cisbp_meme.txt test_fimo...NaNNaNNaNNaNNaNNaNNaNNaNNaN
\n", "

1256 rows × 10 columns

\n", "
" ], "text/plain": [ " motif_id motif_alt_id \\\n", "0 M09096_2.00 NaN \n", "1 M08117_2.00 NaN \n", "2 M09090_2.00 NaN \n", "3 M07960_2.00 NaN \n", "4 M07959_2.00 NaN \n", "... ... ... \n", "1251 M04748_2.00 NaN \n", "1252 M09115_2.00 NaN \n", "1253 # FIMO (Find Individual Motif Occurrences): Ve... NaN \n", "1254 # The format of this file is described at http... NaN \n", "1255 # fimo pwms_MEME/pwms_cisbp_meme.txt test_fimo... NaN \n", "\n", " sequence_name start stop strand score p-value q-value \\\n", "0 random 984.0 996.0 + 17.9000 2.290000e-08 0.000045 \n", "1 random 984.0 998.0 - 17.4646 3.120000e-08 0.000062 \n", "2 random 983.0 994.0 + 16.9109 8.340000e-08 0.000165 \n", "3 random 982.0 996.0 + 17.0900 1.420000e-07 0.000280 \n", "4 random 983.0 997.0 + 16.0400 1.490000e-07 0.000295 \n", "... ... ... ... ... ... ... ... \n", "1251 random 779.0 790.0 + 10.7959 9.950000e-05 0.194000 \n", "1252 random 11.0 29.0 + 10.6837 9.990000e-05 0.196000 \n", "1253 NaN NaN NaN NaN NaN NaN NaN \n", "1254 NaN NaN NaN NaN NaN NaN NaN \n", "1255 NaN NaN NaN NaN NaN NaN NaN \n", "\n", " matched_sequence \n", "0 cAAAGTAAACAAG \n", "1 CCCTTGTTTACTTTG \n", "2 ccAAAGTAAACA \n", "3 tccAAAGTAAACAAG \n", "4 ccAAAGTAAACAAGG \n", "... ... \n", "1251 gaaccggaactc \n", "1252 GTTTACTTTcgtgataagg \n", "1253 NaN \n", "1254 NaN \n", "1255 NaN \n", "\n", "[1256 rows x 10 columns]" ] }, "execution_count": 210, "metadata": {}, "output_type": "execute_result" } ], "source": [ "fimo_test_out = pd.read_csv(os.path.join(project_rootdir, 'fimo_out/fimo.tsv'), sep='\\t', header=0)\n", "fimo_test_out" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "The integrity of the matrix is fine.\n", "\n", "However, we find > 1000 hits within 1000 bp of DNA, for about 4000 motifs. That nicely illustrates the curse of the number of false positives we find with this method. The linear regression step is really crucial." ] }, { "cell_type": "code", "execution_count": 214, "metadata": {}, "outputs": [ { "data": { "text/plain": [ "930" ] }, "execution_count": 214, "metadata": {}, "output_type": "execute_result" } ], "source": [ "fimo_test_out['motif_id'].nunique()" ] } ], "metadata": { "jupytext": { "formats": "ipynb,md" }, "kernelspec": { "display_name": "Python 3", "language": "python", "name": "python3" }, "language_info": { "codemirror_mode": { "name": "ipython", "version": 3 }, "file_extension": ".py", "mimetype": "text/x-python", "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", "version": "3.6.9" } }, "nbformat": 4, "nbformat_minor": 4 }