run_mechanical_model_fidis.sh
1f5f563929a0scratch_cluster_run

run_mechanical_model_fidis.sh
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			#!/bin/bash

			#SBATCH --partition debug
			#SBATCH --nodes 1
			#SBATCH --cpus-per-task 20
			#SBATCH --ntasks-per-node 1
			#SBATCH --mem 48G
			#SBATCH --time 00:59:00
			#SBATCH --error=slurm-%j.stderr
			#SBATCH --output=slurm-%j.stdout
			#SBATCH --job-name=mech_model

			source /home/kubilay/anaconda3/bin/activate

			conda activate muspectre_env2

			export LD_LIBRARY_PATH=/home/kubilay/pnetcdf/lib/:$LD_LIBRARY_PATH


			echo "* STARTING JOB *"

			LOG_FILE="mechanical_model.log"

			mpirun -np 20 python3 residual_stress_analysis.py 60 19 > $LOG_FILE
			#srun python3 netcdf2h5.py 60 >> $LOG_FILE
			mpirun -np 20 python3 residual_stress_analysis.py 61 19 >> $LOG_FILE
			#srun -n 1 --exclusive python3 netcdf2h5.py 61 >> $LOG_FILE

			conda deactivate

			echo "* JOB FINISHED *"