run_hea_1q_2.sh
c8c2f50afc70temperature_mesh_coarse…

run_hea_1q_2.sh
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			#!/bin/bash

			#SBATCH --qos serial
			#SBATCH --nodes 1
			#SBATCH --ntasks 1
			#SBATCH --cpus-per-task 36
			#SBATCH --mem 252000
			#SBATCH --time 71:59:59
			#SBATCH --error=slurm-%j.stderr
			#SBATCH --output=slurm-%j.stdout
			#SBATCH --job-name=mech_model
			#SBATCH --mail-user=recep.kubilay@epfl.ch
			#SBATCH --mail-type=BEGIN,END,FAIL

			set -e

			module purge
			source /home/kubilay/anaconda3/bin/activate
			conda activate muspectre_env2
			export LD_LIBRARY_PATH=/home/kubilay/pnetcdf/lib/:$LD_LIBRARY_PATH

			LOG_FILE="mechanical_model_hea10.log"
			echo "* STARTING JOB *" >$LOG_FILE

			START_LAYER=268
			LAYERS=333
			PROCS=27
			export OPENBLAS_NUM_THREADS=1

			FACTOR=1.0
			TARGET_DIRECTORY="/scratch/kubilay/mechanical_model/results/rate_dependent/factor"_$FACTOR
			mkdir -p $TARGET_DIRECTORY

			for z in $(seq $START_LAYER 1 $LAYERS)
			do
			echo $z >>$LOG_FILE
			mpirun -np 36 python3 -u residual_stress_analysis_hea_1q_2.py $z $PROCS $FACTOR $TARGET_DIRECTORY >>$LOG_FILE
			python3 -u netcdf2h5_hea_1q_2.py $z $FACTOR $TARGET_DIRECTORY >> $LOG_FILE
			done

			conda deactivate

			echo "* JOB FINISHED *" >>$LOG_FILE