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Introduction

This is a BlackDynamite project (Using Renku). The documentation for the philosophy of BlackDynamite can be found here.

Starting the project

The project description can be found in the file [bd.yaml](./bd.yaml). You certainly want to adapt it to your needs.

To help you get started a simple parametric space has been described (open [bd.yaml](./bd.yaml) to see it).

The study is attached with two scripts

• [launch.sh](./launch.sh) : an entry point
• [doIt.py](./doIt.py) : a real script that could be whatever you want

Creating the database and populate with jobs and runs

To create the database and populate for jobs (parametric space), you can do the following in a terminal:

sh
createDB --truerun
createJobs --truerun

To populate for runs you can do

sh
createRuns.py --truerun --machine_name lsmspc35 --nproc 1 --run_name 1

Then you can observe the generated runs

sh
getRunInfos

You can claim for information over the parametric space:

sh
getRunInfo.py --infos param1,param2

Launching the execution of runs

To execute all runs in state CREATED you can do:

sh
launchRuns --truerun

Then you can check for the completion of your jobs

sh
getRunInfo.py

Postprocessing the data

This is usually done in python scripts such as [./notebooks/post_treatment.ipynb](./notebooks/post_treatment.ipynb)