Page MenuHomec4science
Files F68936937

SimulationPanel.java
No OneTemporary
Actions

File Metadata

Created
Sat, Jun 29, 13:49

SimulationPanel.java
View Options

/*
* DeconvolutionLab2
*
* Conditions of use: You are free to use this software for research or
* educational purposes. In addition, we expect you to include adequate
* citations and acknowledgments whenever you present or publish results that
* are based on it.
*
* Reference: DeconvolutionLab2: An Open-Source Software for Deconvolution
* Microscopy D. Sage, L. Donati, F. Soulez, D. Fortun, G. Schmit, A. Seitz,
* R. Guiet, C. Vonesch, M Unser, Methods of Elsevier, 2017.
*/
/*
* Copyright 2010-2017 Biomedical Imaging Group at the EPFL.
*
* This file is part of DeconvolutionLab2 (DL2).
*
* DL2 is free software: you can redistribute it and/or modify it under the
* terms of the GNU General Public License as published by the Free Software
* Foundation, either version 3 of the License, or (at your option) any later
* version.
*
* DL2 is distributed in the hope that it will be useful, but WITHOUT ANY
* WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
* A PARTICULAR PURPOSE. See the GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License along with
* DL2. If not, see <http://www.gnu.org/licenses/>.
*/
package deconvolution.algorithm;
import java.awt.event.KeyEvent;
import java.awt.event.KeyListener;
import javax.swing.JPanel;
import javax.swing.JTextField;
import bilib.component.GridPanel;
import deconvolution.Command;
import deconvolutionlab.Config;
public class SimulationPanel extends AbstractAlgorithmPanel implements KeyListener {
private JTextField txtMean;
private JTextField txtStdev;
private JTextField txtPoisson;
private Simulation algo = new Simulation(0, 0, 0);
@Override
public JPanel getPanelParameters() {
double[] params = algo.getDefaultParameters();
txtMean = new JTextField("" + params[0], 5);
txtStdev = new JTextField("" + params[1], 5);
txtPoisson = new JTextField("" + params[2], 5);
GridPanel pn = new GridPanel(false);
pn.place(1, 0, "<html>Gaussian (Mean)</html>");
pn.place(1, 2, txtMean);
pn.place(2, 0, "<html>Gaussian (Stdev)</html>");
pn.place(2, 2, txtStdev);
pn.place(3, 0, "<html>Poisson</html>");
pn.place(3, 2, txtPoisson);
txtMean.addKeyListener(this);
txtStdev.addKeyListener(this);
txtPoisson.addKeyListener(this);
Config.register("Algorithm." + algo.getShortnames()[0], "gaussian.mean", txtMean, params[0]);
Config.register("Algorithm." + algo.getShortnames()[0], "gaussian.stdev", txtStdev, params[1]);
Config.register("Algorithm." + algo.getShortnames()[0], "poisson", txtPoisson, params[2]);
return pn;
}
@Override
public String getCommand() {
return txtMean.getText() + " " + txtStdev.getText() + " " + txtPoisson.getText();
}
@Override
public void keyTyped(KeyEvent e) {
Command.command();
}
@Override
public void keyPressed(KeyEvent e) {
Command.command();
}
@Override
public void keyReleased(KeyEvent e) {
Command.command();
}
@Override
public String getName() {
return algo.getName();
}
@Override
public String getDocumentation() {
String s = "";
s += "<h1>" + getName();
s += " [<span style=\"color:#FF3333;font-family:georgia\">SIM</span>]</h1>";
s += "<p>This algorithm is only used for simulation. It convolves the input image with the PSF and adds some noise.</p>";
s += "<p>The noise has a Gaussian distribution (mean, stdev) and a Poisson distribution (poisson).</p>";
return s;
}
@Override
public String[] getShortnames() {
return algo.getShortnames();
}
}

Event Timeline

c4science · Help