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build_singularity_images.sh
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Sat, May 18, 13:24

build_singularity_images.sh

#!/bin/bash
echo "Start at $(date)"
# loop over the YAML files
for YAMLFILE in *.yaml;
do
# run the image
echo "******************************************"
echo "********** Building ${YAMLFILE} **********"
echo "******************************************"
echo "Start ${YAMLFILE} at $(date)"
singularity-pipeline -p ${YAMLFILE} build
echo "End ${YAMLFILE} at $(date)"
done;
echo "End at $(date)"

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