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prepare-pipeline2.sh
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Wed, Jul 24, 21:21

prepare-pipeline2.sh
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#!/bin/bash
export PATH=/scratch/ul/projects/singularity/2.3/bin:$PATH
singularity pull -n "pipeline2.img" docker://pescobar/scicore-pipeline2:latest
wget http://users.scicore.unibas.ch/~escobar/data/scicore-pipeline2-input-data.tar.bz2
tar xf scicore-pipeline2-input-data.tar.bz2

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