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create_validation.sh
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Created
Mon, Mar 10, 11:14
Size
258 B
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text/x-shellscript
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Wed, Mar 12, 11:14 (1 d, 23 h)
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blob
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24811875
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R2915 eSCT pipeline interoperability
create_validation.sh
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#!/usr/bin/env bash
rm -rf validation.md5 validation_tmp.md5
for f in data/hc/SAMPLE*_raw.g.vcf;
do
echo ${f} $(cat ${f} | grep -v "^#" | sort | md5sum) >> validation_tmp.md5
done
cat validation_tmp.md5 | sort -k 2 > validation.md5
rm validation_tmp.md5
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