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webdeposit_processor_utils.py
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Thu, Jul 18, 12:40

webdeposit_processor_utils.py
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# -*- coding: utf-8 -*-
##
## This file is part of Invenio.
## Copyright (C) 2013 CERN.
##
## Invenio is free software; you can redistribute it and/or
## modify it under the terms of the GNU General Public License as
## published by the Free Software Foundation; either version 2 of the
## License, or (at your option) any later version.
##
## Invenio is distributed in the hope that it will be useful, but
## WITHOUT ANY WARRANTY; without even the implied warranty of
## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
## General Public License for more details.
##
## You should have received a copy of the GNU General Public License
## along with Invenio; if not, write to the Free Software Foundation, Inc.,
## 59 Temple Place, Suite 330, Boston, MA 02111-1307, USA.
# from wtforms.validators import ValidationError, StopValidation, Regexp
from werkzeug import MultiDict
from invenio.dataciteutils import DataciteMetadata
from invenio.sherpa_romeo import SherpaRomeoSearch
from invenio.bibfield import get_record
from invenio import pidutils
#
# General purpose processors
#
def replace_field_data(field_name, getter=None):
"""
Returns a processor, which will replace the given field names value with
the value from the field where the processor is installed.
"""
def _inner(form, field, submit=False):
getattr(form, field_name).data = getter(field) if getter else field.data
return _inner
#
# PID processors
#
class PidSchemeDetection(object):
"""
Detect the persistent identifier scheme and store it in another field.
"""
def __init__(self, set_field=None):
self.set_field = set_field
def __call__(self, form, field, submit=False):
if field.data:
schemes = pidutils.detect_identifier_schemes(field.data)
if schemes:
getattr(form, self.set_field).data = schemes[0]
class PidNormalize(object):
"""
Normalize a persistent identifier
"""
def __init__(self, scheme_field=None):
self.scheme_field = scheme_field
def __call__(self, form, field, submit=False):
scheme = getattr(form, self.scheme_field).data
field.data = pidutils.normalize_pid(field.data, scheme=scheme)
#
# DOI-related processors
#
def datacite_dict_mapper(datacite, form, mapping):
"""
Helper function to map DataCite metadata to form fields based on a mapping
"""
for func_name, field_name in mapping.items():
setattr(form, field_name, getattr(datacite, func_name)())
class DataCiteLookup(object):
"""
Lookup DOI metadata in DataCite but only if DOI is not locally
administered.
"""
def __init__(self, display_info=False, mapping=None,
mapping_func=None, exclude_prefix='10.5072'):
self.display_info = display_info
self.mapping = mapping or dict(
get_publisher='publisher',
get_titles='title',
get_dates='date',
get_description='abstract',
)
self.mapping_func = mapping_func or datacite_dict_mapper
self.prefix = exclude_prefix
def __call__(self, form, field, submit=False):
if not field.errors and field.data and not field.data.startswith(self.prefix + '/'):
try:
datacite = DataciteMetadata(field.data)
if datacite.error:
if self.display_info:
field.add_message("DOI metadata could not be retrieved.", state='info')
return
if self.mapping_func:
self.mapping_func(datacite, form, self.mapping)
if self.display_info:
field.add_message("DOI metadata successfully imported from DataCite.", state='info')
except Exception:
# Ignore errors
pass
datacite_lookup = DataCiteLookup
def sherpa_romeo_issn_process(form, field, submit=False):
value = field.data or ''
if value == "" or value.isspace():
return dict(error=0, error_message='')
s = SherpaRomeoSearch()
s.search_issn(value)
if s.error:
field.add_message(s.error_message, state='info')
return
if s.get_num_hits() == 1:
journal = s.parser.get_journals(attribute='jtitle')
journal = journal[0]
publisher = s.parser.get_publishers(journal=journal)
if publisher is not None and publisher != []:
if hasattr(form, 'journal'):
form.journal.data = journal
if hasattr(form, 'publisher'):
form.publisher.data = publisher['name']
return
else:
if hasattr(form, 'journal'):
form.journal.data = journal
return
field.add_message("Couldn't find Journal.", state='info')
def sherpa_romeo_publisher_process(form, field, submit=False):
value = field.data or ''
if value == "" or value.isspace():
return
s = SherpaRomeoSearch()
s.search_publisher(value)
if s.error:
field.add_message(s.error_message, state='info')
conditions = s.parser.get_publishers(attribute='conditions')
if conditions is not None and s.get_num_hits() == 1:
conditions = conditions[0]
else:
conditions = []
if conditions != []:
conditions_html = "<u>Conditions</u><br><ol>"
if isinstance(conditions['condition'], str):
conditions_html += "<li>" + conditions['condition'] + "</li>"
else:
for condition in conditions['condition']:
conditions_html += "<li>" + condition + "</li>"
copyright_links = s.parser.get_publishers(attribute='copyrightlinks')
if copyright_links is not None and copyright_links != []:
copyright_links = copyright_links[0]
else:
copyright_links = None
if isinstance(copyright_links, list):
copyright_links_html = ""
for copyright_link in copyright_links['copyrightlink']:
copyright_links_html += '<a href="' + copyright_link['copyrightlinkurl'] + \
'">' + copyright_link['copyrightlinktext'] + "</a><br>"
elif isinstance(copyright_links, dict):
if isinstance(copyright_links['copyrightlink'], list):
for copyright_link in copyright_links['copyrightlink']:
copyright_links_html = '<a href="' + copyright_link['copyrightlinkurl'] + \
'">' + copyright_link['copyrightlinktext'] + "</a><br>"
else:
copyright_link = copyright_links['copyrightlink']
copyright_links_html = '<a href="' + copyright_link['copyrightlinkurl'] + \
'">' + copyright_link['copyrightlinktext'] + "</a><br>"
home_url = s.parser.get_publishers(attribute='homeurl')
if home_url is not None and home_url != []:
home_url = home_url[0]
home_url = '<a href="' + home_url + '">' + home_url + "</a>"
else:
home_url = None
info_html = ""
if home_url is not None:
info_html += "<p>" + home_url + "</p>"
if conditions is not None:
info_html += "<p>" + conditions_html + "</p>"
if copyright_links is not None:
info_html += "<p>" + copyright_links_html + "</p>"
if info_html != "":
field.add_message(info_html, state='info')
def sherpa_romeo_journal_process(form, field, submit=False):
value = field.data or ''
if value == "" or value.isspace():
return
s = SherpaRomeoSearch()
s.search_journal(value, 'exact')
if s.error:
field.add_message(s.error_message, state='info')
return
if s.get_num_hits() == 1:
issn = s.parser.get_journals(attribute='issn')
if issn != [] and issn is not None:
issn = issn[0]
publisher = s.parser.get_publishers(journal=value)
if publisher is not None and publisher != []:
if hasattr(form, 'issn'):
form.issn.data = issn
if hasattr(form, 'publisher'):
form.publisher.data = publisher['name']
form.publisher.post_process(form)
return
field.add_message("Journal's Publisher not found", state='info')
if hasattr(form, 'issn'):
form.issn.data = issn
if hasattr(form, 'publisher'):
form.publisher.data = publisher
form.publisher.post_process(form)
else:
field.add_message("Couldn't find ISSN.", state='info')
def record_id_process(form, field, submit=False):
value = field.data or ''
if value == "" or value.isspace():
return
def is_number(s):
try:
float(s)
return True
except ValueError:
return False
if is_number(field.data):
json_reader = get_record(value)
else:
field.add_message("Record id must be a number!", state='error')
return
if json_reader is not None:
webdeposit_json = form.uncook_json(json_reader, {}, value)
#FIXME: update current json, past self, what do you mean?? :S
field.add_message('<a href="/record/"' + value +
'>Record</a> was loaded successfully',
state='info')
form.process(MultiDict(webdeposit_json))
else:
field.add_message("Record doesn't exist", state='info')

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