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engine.py

## This file is part of Invenio.
## Copyright (C) 2006, 2007, 2008, 2009, 2010, 2011, 2013 CERN.
##
## Invenio is free software; you can redistribute it and/or
## modify it under the terms of the GNU General Public License as
## published by the Free Software Foundation; either version 2 of the
## License, or (at your option) any later version.
##
## Invenio is distributed in the hope that it will be useful, but
## WITHOUT ANY WARRANTY; without even the implied warranty of
## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
## General Public License for more details.
##
## You should have received a copy of the GNU General Public License
## along with Invenio; if not, write to the Free Software Foundation, Inc.,
## 59 Temple Place, Suite 330, Boston, MA 02111-1307, USA.
# pylint: disable=C0103
"""Invenio BibEdit Engine."""
__revision__ = "$Id"
from datetime import datetime
import re
import difflib
import zlib
import copy
import urllib
import urllib2
import cookielib
import json
from flask import url_for
from invenio.modules import formatter as bibformat
from invenio.utils.json import CFG_JSON_AVAILABLE
from invenio.utils.url import auto_version_url
from invenio.legacy.bibrecord.scripts.xmlmarc2textmarc import create_marc_record
from invenio.legacy.bibedit.config import CFG_BIBEDIT_AJAX_RESULT_CODES, \
CFG_BIBEDIT_JS_CHECK_SCROLL_INTERVAL, CFG_BIBEDIT_JS_HASH_CHECK_INTERVAL, \
CFG_BIBEDIT_JS_CLONED_RECORD_COLOR, \
CFG_BIBEDIT_JS_CLONED_RECORD_COLOR_FADE_DURATION, \
CFG_BIBEDIT_JS_NEW_ADD_FIELD_FORM_COLOR, \
CFG_BIBEDIT_JS_NEW_ADD_FIELD_FORM_COLOR_FADE_DURATION, \
CFG_BIBEDIT_JS_NEW_CONTENT_COLOR, \
CFG_BIBEDIT_JS_NEW_CONTENT_COLOR_FADE_DURATION, \
CFG_BIBEDIT_JS_NEW_CONTENT_HIGHLIGHT_DELAY, \
CFG_BIBEDIT_JS_STATUS_ERROR_TIME, CFG_BIBEDIT_JS_STATUS_INFO_TIME, \
CFG_BIBEDIT_JS_TICKET_REFRESH_DELAY, CFG_BIBEDIT_MAX_SEARCH_RESULTS, \
CFG_BIBEDIT_TAG_FORMAT, CFG_BIBEDIT_AJAX_RESULT_CODES_REV, \
CFG_BIBEDIT_AUTOSUGGEST_TAGS, CFG_BIBEDIT_AUTOCOMPLETE_TAGS_KBS,\
CFG_BIBEDIT_KEYWORD_TAXONOMY, CFG_BIBEDIT_KEYWORD_TAG, \
CFG_BIBEDIT_KEYWORD_RDFLABEL, CFG_BIBEDIT_REQUESTS_UNTIL_SAVE, \
CFG_BIBEDIT_DOI_LOOKUP_FIELD, CFG_DOI_USER_AGENT, \
CFG_BIBEDIT_DISPLAY_REFERENCE_TAGS, CFG_BIBEDIT_DISPLAY_AUTHOR_TAGS
from invenio.config import CFG_SITE_LANG, CFG_DEVEL_SITE
from invenio.legacy.bibedit.db_layer import get_name_tags_all, reserve_record_id, \
get_related_hp_changesets, get_hp_update_xml, delete_hp_change, \
get_record_last_modification_date, get_record_revision_author, \
get_marcxml_of_record_revision, delete_related_holdingpen_changes, \
get_record_revisions
from invenio.legacy.bibedit.utils import cache_exists, cache_expired, \
create_cache_file, delete_cache_file, get_bibrecord, \
get_cache_file_contents, get_cache_mtime, get_record_templates, \
get_record_template, latest_record_revision, record_locked_by_other_user, \
record_locked_by_queue, save_xml_record, touch_cache_file, \
update_cache_file_contents, get_field_templates, get_marcxml_of_revision, \
revision_to_timestamp, timestamp_to_revision, \
get_record_revision_timestamps, record_revision_exists, \
can_record_have_physical_copies, extend_record_with_template, \
replace_references, merge_record_with_template, record_xml_output, \
record_is_conference, add_record_cnum, get_xml_from_textmarc, \
record_locked_by_user_details, crossref_process_template, \
modify_record_timestamp
from invenio.legacy.bibrecord import create_record, print_rec, record_add_field, \
record_add_subfield_into, record_delete_field, \
record_delete_subfield_from, \
record_modify_subfield, record_move_subfield, \
create_field, record_replace_field, record_move_fields, \
record_modify_controlfield, record_get_field_values, \
record_get_subfields, record_get_field_instances, record_add_fields, \
record_strip_empty_fields, record_strip_empty_volatile_subfields, \
record_strip_controlfields, record_order_subfields, field_xml_output
from invenio.config import CFG_BIBEDIT_PROTECTED_FIELDS, CFG_CERN_SITE, \
CFG_SITE_URL, CFG_SITE_RECORD, CFG_BIBEDIT_KB_SUBJECTS, \
CFG_BIBEDIT_KB_INSTITUTIONS, CFG_BIBEDIT_AUTOCOMPLETE_INSTITUTIONS_FIELDS, \
CFG_INSPIRE_SITE
from invenio.legacy.search_engine import record_exists, perform_request_search
from invenio.legacy.webuser import session_param_get, session_param_set
from invenio.legacy.bibcatalog.api import bibcatalog_system
from invenio.legacy.webpage import page
from invenio.utils.html import get_mathjax_header
from invenio.utils.text import wash_for_xml, show_diff
from invenio.modules.knowledge.api import get_kbd_values_for_bibedit, get_kbr_values, \
get_kbt_items_for_bibedit, kb_exists
from invenio.legacy.batchuploader.engine import perform_upload_check
from invenio.legacy.bibcirculation.db_layer import get_number_copies, has_copies
from invenio.legacy.bibcirculation.utils import create_item_details_url
from invenio.legacy.refextract.api import FullTextNotAvailable
from invenio.legacy.bibrecord.scripts import xmlmarc2textmarc as xmlmarc2textmarc
from invenio.legacy.bibdocfile.api import BibRecDocs, InvenioBibDocFileError
from invenio.utils.crossref import get_marcxml_for_doi, CrossrefError
import invenio.legacy.template
bibedit_templates = invenio.legacy.template.load('bibedit')
re_revdate_split = re.compile('^(\d\d\d\d)(\d\d)(\d\d)(\d\d)(\d\d)(\d\d)')
def get_empty_fields_templates():
"""
Returning the templates of empty fields::
-an empty data field
-an empty control field
"""
return [{
"name": "Empty field",
"description": "The data field not containing any " + \
"information filled in",
"tag" : "",
"ind1" : "",
"ind2" : "",
"subfields" : [("","")],
"isControlfield" : False
},{
"name" : "Empty control field",
"description" : "The controlfield not containing any " + \
"data or tag description",
"isControlfield" : True,
"tag" : "",
"value" : ""
}]
def get_available_fields_templates():
"""
A method returning all the available field templates
Returns a list of descriptors. Each descriptor has
the same structure as a full field descriptor inside the
record
"""
templates = get_field_templates()
result = get_empty_fields_templates()
for template in templates:
tplTag = template[3].keys()[0]
field = template[3][tplTag][0]
if (field[0] == []):
# if the field is a controlField, add different structure
result.append({
"name" : template[1],
"description" : template[2],
"isControlfield" : True,
"tag" : tplTag,
"value" : field[3]
})
else:
result.append({
"name": template[1],
"description": template[2],
"tag" : tplTag,
"ind1" : field[1],
"ind2" : field[2],
"subfields" : field[0],
"isControlfield" : False
})
return result
def perform_request_init(uid, ln, req, lastupdated):
"""Handle the initial request by adding menu and JavaScript to the page."""
errors = []
warnings = []
body = ''
# Add script data.
record_templates = get_record_templates()
record_templates.sort()
tag_names = get_name_tags_all()
protected_fields = ['001']
protected_fields.extend(CFG_BIBEDIT_PROTECTED_FIELDS.split(','))
cern_site = 'false'
if not CFG_JSON_AVAILABLE:
title = 'Record Editor'
body = '''Sorry, the record editor cannot operate when the
`simplejson' module is not installed. Please see the INSTALL
file.'''
return page(title = title,
body = body,
errors = [],
warnings = [],
uid = uid,
language = ln,
navtrail = "",
lastupdated = lastupdated,
req = req)
body += '<link rel="stylesheet" type="text/css" href="/img/jquery-ui.css" />'
body += '<link rel="stylesheet" type="text/css" href="%s" />' % (
url_for('editor.static', filename='editor/base.css'), )
if CFG_CERN_SITE:
cern_site = 'true'
data = {'gRECORD_TEMPLATES': record_templates,
'gTAG_NAMES': tag_names,
'gPROTECTED_FIELDS': protected_fields,
'gSITE_URL': '"' + CFG_SITE_URL + '"',
'gSITE_RECORD': '"' + CFG_SITE_RECORD + '"',
'gCERN_SITE': cern_site,
'gHASH_CHECK_INTERVAL': CFG_BIBEDIT_JS_HASH_CHECK_INTERVAL,
'gCHECK_SCROLL_INTERVAL': CFG_BIBEDIT_JS_CHECK_SCROLL_INTERVAL,
'gSTATUS_ERROR_TIME': CFG_BIBEDIT_JS_STATUS_ERROR_TIME,
'gSTATUS_INFO_TIME': CFG_BIBEDIT_JS_STATUS_INFO_TIME,
'gCLONED_RECORD_COLOR':
'"' + CFG_BIBEDIT_JS_CLONED_RECORD_COLOR + '"',
'gCLONED_RECORD_COLOR_FADE_DURATION':
CFG_BIBEDIT_JS_CLONED_RECORD_COLOR_FADE_DURATION,
'gNEW_ADD_FIELD_FORM_COLOR':
'"' + CFG_BIBEDIT_JS_NEW_ADD_FIELD_FORM_COLOR + '"',
'gNEW_ADD_FIELD_FORM_COLOR_FADE_DURATION':
CFG_BIBEDIT_JS_NEW_ADD_FIELD_FORM_COLOR_FADE_DURATION,
'gNEW_CONTENT_COLOR': '"' + CFG_BIBEDIT_JS_NEW_CONTENT_COLOR + '"',
'gNEW_CONTENT_COLOR_FADE_DURATION':
CFG_BIBEDIT_JS_NEW_CONTENT_COLOR_FADE_DURATION,
'gNEW_CONTENT_HIGHLIGHT_DELAY':
CFG_BIBEDIT_JS_NEW_CONTENT_HIGHLIGHT_DELAY,
'gTICKET_REFRESH_DELAY': CFG_BIBEDIT_JS_TICKET_REFRESH_DELAY,
'gRESULT_CODES': CFG_BIBEDIT_AJAX_RESULT_CODES,
'gAUTOSUGGEST_TAGS' : CFG_BIBEDIT_AUTOSUGGEST_TAGS,
'gAUTOCOMPLETE_TAGS' : CFG_BIBEDIT_AUTOCOMPLETE_TAGS_KBS.keys(),
'gKEYWORD_TAG' : '"' + CFG_BIBEDIT_KEYWORD_TAG + '"',
'gREQUESTS_UNTIL_SAVE' : CFG_BIBEDIT_REQUESTS_UNTIL_SAVE,
'gAVAILABLE_KBS': get_available_kbs(),
'gTagsToAutocomplete': CFG_BIBEDIT_AUTOCOMPLETE_INSTITUTIONS_FIELDS,
'gDOILookupField': '"' + CFG_BIBEDIT_DOI_LOOKUP_FIELD + '"',
'gDisplayReferenceTags': CFG_BIBEDIT_DISPLAY_REFERENCE_TAGS,
'gDisplayAuthorTags': CFG_BIBEDIT_DISPLAY_AUTHOR_TAGS
}
body += '<script type="text/javascript">\n'
for key in data:
body += ' var %s = %s;\n' % (key, data[key])
body += ' </script>\n'
# Adding the information about field templates
fieldTemplates = get_available_fields_templates()
body += "<script>\n" + \
" var fieldTemplates = %s\n" % (json.dumps(fieldTemplates), ) + \
"</script>\n"
# Add scripts (the ordering is NOT irrelevant).
scripts = ['jquery-ui.min.js', 'jquery.jeditable.mini.js',
'jquery.hotkeys.js', 'json2.js']
bibedit_scripts = ['refextract.js', 'display.js', 'engine.js', 'keys.js',
'menu.js', 'holdingpen.js', 'marcxml.js',
'clipboard.js']
for script in scripts:
body += ' <script type="text/javascript" src="%s">' \
'</script>\n' % (url_for('static', filename='js/' + script), )
for script in bibedit_scripts:
body += ' <script type="text/javascript" src="%s">' \
'</script>\n' % (url_for('editor.static',
filename='js/editor/' + script), )
# Init BibEdit
body += '<script>$(init_bibedit);</script>'
# Build page structure and menu.
# rec = create_record(format_record(235, "xm"))[0]
#oaiId = record_extract_oai_id(rec)
body += bibedit_templates.menu()
body += bibedit_templates.focuson()
body += """<div id="bibEditContent">
<div class="revisionLine"></div>
<div id="Toptoolbar"></div>
<div id="bibEditMessage"></div>
<div id="bibEditContentTable"></div>
</div>"""
return body, errors, warnings
def get_available_kbs():
"""
Return list of KBs that are available in the system to be used with
BibEdit
"""
kb_list = [CFG_BIBEDIT_KB_INSTITUTIONS, CFG_BIBEDIT_KB_SUBJECTS]
available_kbs = [kb for kb in kb_list if kb_exists(kb)]
return available_kbs
def record_has_pdf(recid):
""" Check if record has a pdf attached
"""
rec_info = BibRecDocs(recid)
docs = rec_info.list_bibdocs()
return bool(docs)
def get_marcxml_of_revision_id(recid, revid):
"""
Return MARCXML string with corresponding to revision REVID
(=RECID.REVDATE) of a record. Return empty string if revision
does not exist.
"""
job_date = "%s-%s-%s %s:%s:%s" % re_revdate_split.search(revid).groups()
tmp_res = get_marcxml_of_record_revision(recid, job_date)
if tmp_res:
for row in tmp_res:
xml = zlib.decompress(row[0]) + "\n"
# xml contains marcxml of record
# now we create a record object from this xml and sort fields and subfields
# and return marcxml
rec = create_record(xml)[0]
record_order_subfields(rec)
marcxml = record_xml_output(rec, order_fn="_order_by_tags")
return marcxml
def perform_request_compare(ln, recid, rev1, rev2):
"""Handle a request for comparing two records"""
body = ""
errors = []
warnings = []
if (not record_revision_exists(recid, rev1)) or \
(not record_revision_exists(recid, rev2)):
body = "The requested record revision does not exist !"
else:
xml1 = get_marcxml_of_revision_id(recid, rev1)
xml2 = get_marcxml_of_revision_id(recid, rev2)
# Create MARC representations of the records
marc1 = create_marc_record(create_record(xml1)[0], '', {"text-marc": 1, "aleph-marc": 0})
marc2 = create_marc_record(create_record(xml2)[0], '', {"text-marc": 1, "aleph-marc": 0})
comparison = show_diff(marc1, marc2)
job_date1 = "%s-%s-%s %s:%s:%s" % re_revdate_split.search(rev1).groups()
job_date2 = "%s-%s-%s %s:%s:%s" % re_revdate_split.search(rev2).groups()
body += bibedit_templates.history_comparebox(ln, job_date1,
job_date2, comparison)
return body, errors, warnings
def perform_request_newticket(recid, uid):
"""create a new ticket with this record's number
@param recid: record id
@param uid: user id
@return: (error_msg, url)
"""
t_url = ""
errmsg = ""
if bibcatalog_system is not None:
t_id = bibcatalog_system.ticket_submit(uid, "", recid, "")
if t_id:
#get the ticket's URL
t_url = bibcatalog_system.ticket_get_attribute(uid, t_id, 'url_modify')
else:
errmsg = "ticket_submit failed"
else:
errmsg = "No ticket system configured"
return (errmsg, t_url)
def perform_request_ajax(req, recid, uid, data, isBulk = False):
"""Handle Ajax requests by redirecting to appropriate function."""
response = {}
request_type = data['requestType']
undo_redo = None
if "undoRedo" in data:
undo_redo = data["undoRedo"]
# Call function based on request type.
if request_type == 'searchForRecord':
# Search request.
response.update(perform_request_bibedit_search(data, req))
elif request_type in ['changeTagFormat']:
# User related requests.
response.update(perform_request_user(req, request_type, recid, data))
elif request_type in ('getRecord', 'submit', 'cancel', 'newRecord',
'deleteRecord', 'deleteRecordCache', 'prepareRecordMerge', 'revert',
'updateCacheRef', 'submittextmarc'):
# 'Major' record related requests.
response.update(perform_request_record(req, request_type, recid, uid,
data))
elif request_type in ('addField', 'addSubfields', \
'addFieldsSubfieldsOnPositions', 'modifyContent', \
'modifySubfieldTag', 'modifyFieldTag', \
'moveSubfield', 'deleteFields', 'moveField', \
'modifyField', 'otherUpdateRequest', \
'disableHpChange', 'deactivateHoldingPenChangeset'):
# Record updates.
cacheMTime = data['cacheMTime']
if 'hpChanges' in data:
hpChanges = data['hpChanges']
else:
hpChanges = {}
response.update(perform_request_update_record(request_type, recid, \
uid, cacheMTime, data, \
hpChanges, undo_redo, \
isBulk))
elif request_type in ('autosuggest', 'autocomplete', 'autokeyword'):
response.update(perform_request_autocomplete(request_type, recid, uid, \
data))
elif request_type in ('getTickets', ):
# BibCatalog requests.
response.update(perform_request_bibcatalog(request_type, recid, uid))
elif request_type in ('getHoldingPenUpdates', ):
response.update(perform_request_holdingpen(request_type, recid))
elif request_type in ('getHoldingPenUpdateDetails', \
'deleteHoldingPenChangeset'):
updateId = data['changesetNumber']
response.update(perform_request_holdingpen(request_type, recid, \
updateId))
elif request_type in ('applyBulkUpdates', ):
# a general version of a bulk request
changes = data['requestsData']
cacheMTime = data['cacheMTime']
response.update(perform_bulk_request_ajax(req, recid, uid, changes, \
undo_redo, cacheMTime))
elif request_type in ('preview', ):
response.update(perform_request_preview_record(request_type, recid, uid, data))
elif request_type in ('get_pdf_url', ):
response.update(perform_request_get_pdf_url(recid))
elif request_type in ('refextract', ):
txt = None
if 'txt' in data:
txt = data["txt"]
response.update(perform_request_ref_extract(recid, uid, txt))
elif request_type in ('refextracturl', ):
response.update(perform_request_ref_extract_url(recid, uid, data['url']))
elif request_type == 'getTextMarc':
response.update(perform_request_get_textmarc(recid, uid))
elif request_type == "getTableView":
response.update(perform_request_get_tableview(recid, uid, data))
elif request_type == "DOISearch":
response.update(perform_doi_search(data['doi']))
return response
def perform_bulk_request_ajax(req, recid, uid, reqsData, undoRedo, cacheMTime):
""" An AJAX handler used when treating bulk updates """
lastResult = {}
lastTime = cacheMTime
isFirst = True
for data in reqsData:
assert data != None
data['cacheMTime'] = lastTime
if isFirst and undoRedo != None:
# we add the undo/redo handler to the first operation in order to
# save the handler on the server side !
data['undoRedo'] = undoRedo
isFirst = False
lastResult = perform_request_ajax(req, recid, uid, data, isBulk=True)
# now we have to update the cacheMtime in next request !
# if lastResult.has_key('cacheMTime'):
try:
lastTime = lastResult['cacheMTime']
except:
raise Exception(str(lastResult))
return lastResult
def perform_request_bibedit_search(data, req):
"""Handle search requests."""
response = {}
searchType = data['searchType']
if searchType is None:
searchType = "anywhere"
searchPattern = data['searchPattern']
if searchType == 'anywhere':
pattern = searchPattern
else:
pattern = searchType + ':' + searchPattern
result_set = list(perform_request_search(req=req, p=pattern))
response['resultCode'] = 1
response['resultSet'] = result_set[0:CFG_BIBEDIT_MAX_SEARCH_RESULTS]
return response
def perform_request_user(req, request_type, recid, data):
"""Handle user related requests."""
response = {}
if request_type == 'changeTagFormat':
tagformat_settings = session_param_get(req, 'bibedit_tagformat', {})
tagformat_settings[recid] = data['tagFormat']
session_param_set(req, 'bibedit_tagformat', tagformat_settings)
response['resultCode'] = 2
return response
def perform_request_holdingpen(request_type, recId, changeId=None):
"""
A method performing the holdingPen ajax request. The following types of
requests can be made::
-getHoldingPenUpdates: retrieving the holding pen updates pending
for a given record
"""
response = {}
if request_type == 'getHoldingPenUpdates':
changeSet = get_related_hp_changesets(recId)
changes = []
for change in changeSet:
changes.append((str(change[0]), str(change[1])))
response["changes"] = changes
elif request_type == 'getHoldingPenUpdateDetails':
# returning the list of changes related to the holding pen update
# the format based on what the record difference xtool returns
assert(changeId != None)
hpContent = get_hp_update_xml(changeId)
holdingPenRecord = create_record(hpContent[0], "xm")[0]
# order subfields alphabetically
record_order_subfields(holdingPenRecord)
# databaseRecord = get_record(hpContent[1])
response['record'] = holdingPenRecord
response['changeset_number'] = changeId
elif request_type == 'deleteHoldingPenChangeset':
assert(changeId != None)
delete_hp_change(changeId)
return response
def perform_request_record(req, request_type, recid, uid, data, ln=CFG_SITE_LANG):
"""Handle 'major' record related requests like fetching, submitting or
deleting a record, cancel editing or preparing a record for merging.
"""
response = {}
if request_type == 'newRecord':
# Create a new record.
new_recid = reserve_record_id()
new_type = data['newType']
if new_type == 'empty':
# Create a new empty record.
create_cache_file(recid, uid)
response['resultCode'], response['newRecID'] = 6, new_recid
elif new_type == 'template':
# Create a new record from XML record template.
template_filename = data['templateFilename']
template = get_record_template(template_filename)
if not template:
response['resultCode'] = 108
else:
record = create_record(template)[0]
if not record:
response['resultCode'] = 109
else:
record_add_field(record, '001',
controlfield_value=str(new_recid))
create_cache_file(new_recid, uid, record, True)
response['resultCode'], response['newRecID'] = 7, new_recid
elif new_type == 'import':
# Import data from external source, using DOI
doi = data['doi']
if not doi:
response['resultCode'] = CFG_BIBEDIT_AJAX_RESULT_CODES_REV['error_no_doi_specified']
else:
try:
marcxml_template = get_marcxml_for_doi(doi)
except CrossrefError as inst:
response['resultCode'] = \
CFG_BIBEDIT_AJAX_RESULT_CODES_REV[inst.code]
except:
response['resultCode'] = 0
else:
record = crossref_process_template(marcxml_template, CFG_INSPIRE_SITE)
if not record:
response['resultCode'] = 109
else:
record_add_field(record, '001',
controlfield_value=str(new_recid))
create_cache_file(new_recid, uid, record, True)
response['resultCode'], response['newRecID'] = 7, new_recid
elif new_type == 'clone':
# Clone an existing record (from the users cache).
existing_cache = cache_exists(recid, uid)
if existing_cache:
try:
record = get_cache_file_contents(recid, uid)[2]
except:
# if, for example, the cache format was wrong (outdated)
record = get_bibrecord(recid)
else:
# Cache missing. Fall back to using original version.
record = get_bibrecord(recid)
record_delete_field(record, '001')
record_add_field(record, '001', controlfield_value=str(new_recid))
create_cache_file(new_recid, uid, record, True)
response['resultCode'], response['newRecID'] = 8, new_recid
elif request_type == 'getRecord':
# Fetch the record. Possible error situations:
# - Non-existing record
# - Deleted record
# - Record locked by other user
# - Record locked by queue
# A cache file will be created if it does not exist.
# If the cache is outdated (i.e., not based on the latest DB revision),
# cacheOutdated will be set to True in the response.
record_status = record_exists(recid)
existing_cache = cache_exists(recid, uid)
read_only_mode = False
if "inReadOnlyMode" in data:
read_only_mode = data['inReadOnlyMode']
if record_status == 0:
response['resultCode'] = 102
elif not read_only_mode and not existing_cache and \
record_locked_by_other_user(recid, uid):
name, email, locked_since = record_locked_by_user_details(recid, uid)
response['locked_details'] = {'name': name,
'email': email,
'locked_since': locked_since}
response['resultCode'] = 104
elif not read_only_mode and existing_cache and \
cache_expired(recid, uid) and \
record_locked_by_other_user(recid, uid):
response['resultCode'] = 104
elif not read_only_mode and record_locked_by_queue(recid):
response['resultCode'] = 105
else:
if data.get('deleteRecordCache'):
delete_cache_file(recid, uid)
existing_cache = False
pending_changes = []
disabled_hp_changes = {}
if read_only_mode:
if 'recordRevision' in data and data['recordRevision'] != 'sampleValue':
record_revision_ts = data['recordRevision']
record_xml = get_marcxml_of_revision(recid, \
record_revision_ts)
record = create_record(record_xml)[0]
record_revision = timestamp_to_revision(record_revision_ts)
pending_changes = []
disabled_hp_changes = {}
else:
# a normal cacheless retrieval of a record
record = get_bibrecord(recid)
record_revision = get_record_last_modification_date(recid)
if record_revision == None:
record_revision = datetime.now().timetuple()
pending_changes = []
disabled_hp_changes = {}
cache_dirty = False
mtime = 0
undo_list = []
redo_list = []
elif not existing_cache:
record_revision, record = create_cache_file(recid, uid)
mtime = get_cache_mtime(recid, uid)
pending_changes = []
disabled_hp_changes = {}
undo_list = []
redo_list = []
cache_dirty = False
else:
#TODO: This try except should be replaced with something nicer,
# like an argument indicating if a new cache file is to
# be created
try:
cache_dirty, record_revision, record, pending_changes, \
disabled_hp_changes, undo_list, redo_list = \
get_cache_file_contents(recid, uid)
touch_cache_file(recid, uid)
mtime = get_cache_mtime(recid, uid)
if not latest_record_revision(recid, record_revision) and \
get_record_revisions(recid) != ():
# This sould prevent from using old cache in case of
# viewing old version. If there are no revisions,
# it means we should skip this step because this
# is a new record
response['cacheOutdated'] = True
except:
record_revision, record = create_cache_file(recid, uid)
mtime = get_cache_mtime(recid, uid)
pending_changes = []
disabled_hp_changes = {}
cache_dirty = False
undo_list = []
redo_list = []
if data.get('clonedRecord',''):
response['resultCode'] = 9
else:
response['resultCode'] = 3
revision_author = get_record_revision_author(recid, record_revision)
latest_revision = get_record_last_modification_date(recid)
if latest_revision == None:
latest_revision = datetime.now().timetuple()
last_revision_ts = revision_to_timestamp(latest_revision)
revisions_history = get_record_revision_timestamps(recid)
number_of_physical_copies = get_number_copies(recid)
bibcirc_details_URL = create_item_details_url(recid, ln)
can_have_copies = can_record_have_physical_copies(recid)
# For some collections, merge template with record
template_to_merge = extend_record_with_template(recid)
if template_to_merge:
merged_record = merge_record_with_template(record, template_to_merge)
if merged_record:
record = merged_record
create_cache_file(recid, uid, record, True)
if record_status == -1:
# The record was deleted
response['resultCode'] = 103
response['record_has_pdf'] = record_has_pdf(recid)
# order subfields alphabetically
record_order_subfields(record)
response['cacheDirty'], response['record'], \
response['cacheMTime'], response['recordRevision'], \
response['revisionAuthor'], response['lastRevision'], \
response['revisionsHistory'], response['inReadOnlyMode'], \
response['pendingHpChanges'], response['disabledHpChanges'], \
response['undoList'], response['redoList'] = cache_dirty, \
record, mtime, revision_to_timestamp(record_revision), \
revision_author, last_revision_ts, revisions_history, \
read_only_mode, pending_changes, disabled_hp_changes, \
undo_list, redo_list
response['numberOfCopies'] = number_of_physical_copies
response['bibCirculationUrl'] = bibcirc_details_URL
response['canRecordHavePhysicalCopies'] = can_have_copies
# Set tag format from user's session settings.
tagformat_settings = session_param_get(req, 'bibedit_tagformat')
tagformat = (tagformat_settings is not None) and tagformat_settings.get(recid, CFG_BIBEDIT_TAG_FORMAT) or CFG_BIBEDIT_TAG_FORMAT
response['tagFormat'] = tagformat
# KB information
response['KBSubject'] = CFG_BIBEDIT_KB_SUBJECTS
response['KBInstitution'] = CFG_BIBEDIT_KB_INSTITUTIONS
elif request_type == 'submit':
# Submit the record. Possible error situations:
# - Missing cache file
# - Cache file modified in other editor
# - Record locked by other user
# - Record locked by queue
# If the cache is outdated cacheOutdated will be set to True in the
# response.
if not cache_exists(recid, uid):
response['resultCode'] = 106
elif not get_cache_mtime(recid, uid) == data['cacheMTime']:
response['resultCode'] = 107
elif cache_expired(recid, uid) and \
record_locked_by_other_user(recid, uid):
response['resultCode'] = 104
elif record_locked_by_queue(recid):
response['resultCode'] = 105
else:
try:
tmp_result = get_cache_file_contents(recid, uid)
record_revision = tmp_result[1]
record = tmp_result[2]
pending_changes = tmp_result[3]
# disabled_changes = tmp_result[4]
xml_record = wash_for_xml(print_rec(record))
record, status_code, list_of_errors = create_record(xml_record)
# Simulate upload to catch errors
errors_upload = perform_upload_check(xml_record, '--replace')
if errors_upload:
response['resultCode'], response['errors'] = 113, \
errors_upload
return response
elif status_code == 0:
response['resultCode'], response['errors'] = 110, \
list_of_errors
if not data['force'] and not latest_record_revision(recid, record_revision):
response['cacheOutdated'] = True
else:
if record_is_conference(record):
new_cnum = add_record_cnum(recid, uid)
if new_cnum:
response["new_cnum"] = new_cnum
save_xml_record(recid, uid)
response['resultCode'] = 4
except Exception as e:
response['resultCode'] = CFG_BIBEDIT_AJAX_RESULT_CODES_REV[ \
'error_wrong_cache_file_format']
if CFG_DEVEL_SITE: # return debug information in the request
response['exception_message'] = e.__str__()
elif request_type == 'revert':
revId = data['revId']
job_date = "%s-%s-%s %s:%s:%s" % re_revdate_split.search(revId).groups()
revision_xml = get_marcxml_of_revision(recid, job_date)
# Modify the 005 tag in order to merge with the latest version of record
last_revision_ts = data['lastRevId'] + ".0"
revision_xml = modify_record_timestamp(revision_xml, last_revision_ts)
save_xml_record(recid, uid, revision_xml)
if (cache_exists(recid, uid)):
delete_cache_file(recid, uid)
response['resultCode'] = 4
elif request_type == 'cancel':
# Cancel editing by deleting the cache file. Possible error situations:
# - Cache file modified in other editor
if cache_exists(recid, uid):
if get_cache_mtime(recid, uid) == data['cacheMTime']:
delete_cache_file(recid, uid)
response['resultCode'] = 5
else:
response['resultCode'] = 107
else:
response['resultCode'] = 5
elif request_type == 'deleteRecord':
# Submit the record. Possible error situations:
# - Record locked by other user
# - Record locked by queue
# As the user is requesting deletion we proceed even if the cache file
# is missing and we don't check if the cache is outdated or has
# been modified in another editor.
existing_cache = cache_exists(recid, uid)
pending_changes = []
if has_copies(recid):
response['resultCode'] = \
CFG_BIBEDIT_AJAX_RESULT_CODES_REV['error_physical_copies_exist']
elif existing_cache and cache_expired(recid, uid) and \
record_locked_by_other_user(recid, uid):
response['resultCode'] = \
CFG_BIBEDIT_AJAX_RESULT_CODES_REV['error_rec_locked_by_user']
elif record_locked_by_queue(recid):
response['resultCode'] = \
CFG_BIBEDIT_AJAX_RESULT_CODES_REV['error_rec_locked_by_queue']
else:
if not existing_cache:
record_revision, record, pending_changes, \
deactivated_hp_changes, undo_list, redo_list = \
create_cache_file(recid, uid)
else:
try:
record_revision, record, pending_changes, \
deactivated_hp_changes, undo_list, redo_list = \
get_cache_file_contents(recid, uid)[1:]
except:
record_revision, record, pending_changes, \
deactivated_hp_changes = create_cache_file(recid, uid)
record_add_field(record, '980', ' ', ' ', '', [('c', 'DELETED')])
undo_list = []
redo_list = []
update_cache_file_contents(recid, uid, record_revision, record, \
pending_changes, \
deactivated_hp_changes, undo_list, \
redo_list)
save_xml_record(recid, uid)
delete_related_holdingpen_changes(recid) # we don't need any changes
# related to a deleted record
response['resultCode'] = 10
elif request_type == 'deleteRecordCache':
# Delete the cache file. Ignore the request if the cache has been
# modified in another editor.
if 'cacheMTime' in data:
if cache_exists(recid, uid) and get_cache_mtime(recid, uid) == \
data['cacheMTime']:
delete_cache_file(recid, uid)
response['resultCode'] = 11
elif request_type == 'updateCacheRef':
# Update cache with the contents coming from BibEdit JS interface
# Used when updating references using ref extractor
record_revision, record, pending_changes, \
deactivated_hp_changes, undo_list, redo_list = \
get_cache_file_contents(recid, uid)[1:]
record = create_record(data['recXML'])[0]
response['cacheMTime'], response['cacheDirty'] = update_cache_file_contents(recid, uid, record_revision, record, \
pending_changes, \
deactivated_hp_changes, undo_list, \
redo_list), True
response['resultCode'] = CFG_BIBEDIT_AJAX_RESULT_CODES_REV['cache_updated_with_references']
elif request_type == 'prepareRecordMerge':
# We want to merge the cache with the current DB version of the record,
# so prepare an XML file from the file cache, to be used by BibMerge.
# Possible error situations:
# - Missing cache file
# - Record locked by other user
# - Record locked by queue
# We don't check if cache is outdated (a likely scenario for this
# request) or if it has been modified in another editor.
if not cache_exists(recid, uid):
response['resultCode'] = 106
elif cache_expired(recid, uid) and \
record_locked_by_other_user(recid, uid):
response['resultCode'] = 104
elif record_locked_by_queue(recid):
response['resultCode'] = 105
else:
save_xml_record(recid, uid, to_upload=False, to_merge=True)
response['resultCode'] = 12
elif request_type == 'submittextmarc':
# Textmarc content coming from the user
textmarc_record = data['textmarc']
xml_conversion_status = get_xml_from_textmarc(recid, textmarc_record)
if xml_conversion_status['resultMsg'] == "textmarc_parsing_error":
response.update(xml_conversion_status)
return response
# Simulate upload to catch errors
errors_upload = perform_upload_check(xml_conversion_status['resultXML'], '--replace')
if errors_upload:
response['resultCode'], response['errors'] = 113, \
errors_upload
return response
response.update(xml_conversion_status)
if xml_conversion_status['resultMsg'] == 'textmarc_parsing_success':
create_cache_file(recid, uid,
create_record(response['resultXML'])[0])
save_xml_record(recid, uid)
response['resultCode'] = CFG_BIBEDIT_AJAX_RESULT_CODES_REV["record_submitted"]
return response
def perform_request_update_record(request_type, recid, uid, cacheMTime, data, \
hpChanges, undoRedoOp, isBulk=False):
"""
Handle record update requests like adding, modifying, moving or deleting
of fields or subfields. Possible common error situations::
- Missing cache file
- Cache file modified in other editor
@param undoRedoOp: Indicates in "undo"/"redo"/undo_descriptor operation is
performed by a current request.
"""
response = {}
if not cache_exists(recid, uid):
response['resultCode'] = 106
elif not get_cache_mtime(recid, uid) == cacheMTime and isBulk == False:
# In case of a bulk request, the changes are deliberately performed
# immediately one after another
response['resultCode'] = 107
else:
try:
record_revision, record, pending_changes, deactivated_hp_changes, \
undo_list, redo_list = get_cache_file_contents(recid, uid)[1:]
except:
response['resultCode'] = CFG_BIBEDIT_AJAX_RESULT_CODES_REV[ \
'error_wrong_cache_file_format']
return response
# process all the Holding Pen changes operations ... regardles the
# request type
if "toDisable" in hpChanges:
for changeId in hpChanges["toDisable"]:
pending_changes[changeId]["applied_change"] = True
if "toEnable" in hpChanges:
for changeId in hpChanges["toEnable"]:
pending_changes[changeId]["applied_change"] = False
if "toOverride" in hpChanges:
pending_changes = hpChanges["toOverride"]
if "changesetsToDeactivate" in hpChanges:
for changesetId in hpChanges["changesetsToDeactivate"]:
deactivated_hp_changes[changesetId] = True
if "changesetsToActivate" in hpChanges:
for changesetId in hpChanges["changesetsToActivate"]:
deactivated_hp_changes[changesetId] = False
# processing the undo/redo entries
if undoRedoOp == "undo":
try:
redo_list = [undo_list[-1]] + redo_list
undo_list = undo_list[:-1]
except:
raise Exception("An exception occured when undoing previous" + \
" operation. Undo list: " + str(undo_list) + \
" Redo list " + str(redo_list))
elif undoRedoOp == "redo":
try:
undo_list = undo_list + [redo_list[0]]
redo_list = redo_list[1:]
except:
raise Exception("An exception occured when redoing previous" + \
" operation. Undo list: " + str(undo_list) + \
" Redo list " + str(redo_list))
else:
# This is a genuine operation - we have to add a new descriptor
# to the undo list and cancel the redo unless the operation is
# a bulk operation
if undoRedoOp != None:
undo_list = undo_list + [undoRedoOp]
redo_list = []
else:
assert isBulk == True
field_position_local = data.get('fieldPosition')
if field_position_local is not None:
field_position_local = int(field_position_local)
if request_type == 'otherUpdateRequest':
# An empty request. Might be useful if we want to perform
# operations that require only the actions performed globally,
# like modifying the holdingPen changes list
response['resultCode'] = CFG_BIBEDIT_AJAX_RESULT_CODES_REV[ \
'editor_modifications_changed']
elif request_type == 'deactivateHoldingPenChangeset':
# the changeset has been marked as processed ( user applied it in
# the editor). Marking as used in the cache file.
# CAUTION: This function has been implemented here because logically
# it fits with the modifications made to the cache file.
# No changes are made to the Holding Pen physically. The
# changesets are related to the cache because we want to
# cancel the removal every time the cache disappears for
# any reason
response['resultCode'] = CFG_BIBEDIT_AJAX_RESULT_CODES_REV[ \
'disabled_hp_changeset']
elif request_type == 'addField':
if data['controlfield']:
record_add_field(record, data['tag'],
controlfield_value=data['value'])
response['resultCode'] = 20
else:
record_add_field(record, data['tag'], data['ind1'],
data['ind2'], subfields=data['subfields'],
field_position_local=field_position_local)
response['resultCode'] = 21
elif request_type == 'addSubfields':
subfields = data['subfields']
for subfield in subfields:
record_add_subfield_into(record, data['tag'], subfield[0],
subfield[1], subfield_position=None,
field_position_local=field_position_local)
if len(subfields) == 1:
response['resultCode'] = 22
else:
response['resultCode'] = 23
elif request_type == 'addFieldsSubfieldsOnPositions':
#1) Sorting the fields by their identifiers
fieldsToAdd = data['fieldsToAdd']
subfieldsToAdd = data['subfieldsToAdd']
for tag in fieldsToAdd.keys():
positions = fieldsToAdd[tag].keys()
positions.sort()
for position in positions:
# now adding fields at a position
isControlfield = (len(fieldsToAdd[tag][position][0]) == 0)
# if there are n subfields, this is a control field
if isControlfield:
controlfieldValue = fieldsToAdd[tag][position][3]
record_add_field(record, tag, field_position_local = \
int(position), \
controlfield_value = \
controlfieldValue)
else:
subfields = fieldsToAdd[tag][position][0]
ind1 = fieldsToAdd[tag][position][1]
ind2 = fieldsToAdd[tag][position][2]
record_add_field(record, tag, ind1, ind2, subfields = \
subfields, field_position_local = \
int(position))
# now adding the subfields
for tag in subfieldsToAdd.keys():
for fieldPosition in subfieldsToAdd[tag].keys(): #now the fields
#order not important !
subfieldsPositions = subfieldsToAdd[tag][fieldPosition]. \
keys()
subfieldsPositions.sort()
for subfieldPosition in subfieldsPositions:
subfield = subfieldsToAdd[tag][fieldPosition]\
[subfieldPosition]
record_add_subfield_into(record, tag, subfield[0], \
subfield[1], \
subfield_position = \
int(subfieldPosition), \
field_position_local = \
int(fieldPosition))
response['resultCode'] = \
CFG_BIBEDIT_AJAX_RESULT_CODES_REV['added_positioned_subfields']
elif request_type == 'modifyField': # changing the field structure
# first remove subfields and then add new... change the indices
subfields = data['subFields'] # parse the JSON representation of
# the subfields here
new_field = create_field(subfields, data['ind1'], data['ind2'])
record_replace_field(record, data['tag'], new_field, \
field_position_local = data['fieldPosition'])
response['resultCode'] = 26
elif request_type == 'modifyContent':
if data['subfieldIndex'] != None:
record_modify_subfield(record, data['tag'],
data['subfieldCode'], data['value'],
int(data['subfieldIndex']),
field_position_local=field_position_local)
else:
record_modify_controlfield(record, data['tag'], data["value"],
field_position_local=field_position_local)
response['resultCode'] = 24
elif request_type == 'modifySubfieldTag':
record_add_subfield_into(record, data['tag'], data['subfieldCode'],
data["value"], subfield_position= int(data['subfieldIndex']),
field_position_local=field_position_local)
record_delete_subfield_from(record, data['tag'], int(data['subfieldIndex']) + 1,
field_position_local=field_position_local)
response['resultCode'] = 24
elif request_type == 'modifyFieldTag':
subfields = record_get_subfields(record, data['oldTag'],
field_position_local=field_position_local)
record_add_field(record, data['newTag'], data['ind1'],
data['ind2'] , subfields=subfields)
record_delete_field(record, data['oldTag'], ind1=data['oldInd1'], \
ind2=data['oldInd2'], field_position_local=field_position_local)
response['resultCode'] = 32
elif request_type == 'moveSubfield':
record_move_subfield(record, data['tag'],
int(data['subfieldIndex']), int(data['newSubfieldIndex']),
field_position_local=field_position_local)
response['resultCode'] = 25
elif request_type == 'moveField':
if data['direction'] == 'up':
final_position_local = field_position_local-1
else: # direction is 'down'
final_position_local = field_position_local+1
record_move_fields(record, data['tag'], [field_position_local],
final_position_local)
response['resultCode'] = 32
elif request_type == 'deleteFields':
to_delete = data['toDelete']
deleted_fields = 0
deleted_subfields = 0
for tag in to_delete:
#Sorting the fields in a edcreasing order by the local position!
fieldsOrder = to_delete[tag].keys()
fieldsOrder.sort(lambda a, b: int(b) - int(a))
for field_position_local in fieldsOrder:
if not to_delete[tag][field_position_local]:
# No subfields specified - delete entire field.
record_delete_field(record, tag,
field_position_local=int(field_position_local))
deleted_fields += 1
else:
for subfield_position in \
to_delete[tag][field_position_local][::-1]:
# Delete subfields in reverse order (to keep the
# indexing correct).
record_delete_subfield_from(record, tag,
int(subfield_position),
field_position_local=int(field_position_local))
deleted_subfields += 1
if deleted_fields == 1 and deleted_subfields == 0:
response['resultCode'] = 26
elif deleted_fields and deleted_subfields == 0:
response['resultCode'] = 27
elif deleted_subfields == 1 and deleted_fields == 0:
response['resultCode'] = 28
elif deleted_subfields and deleted_fields == 0:
response['resultCode'] = 29
else:
response['resultCode'] = 30
response['cacheMTime'], response['cacheDirty'] = \
update_cache_file_contents(recid, uid, record_revision,
record, \
pending_changes, \
deactivated_hp_changes, \
undo_list, redo_list), \
True
return response
def perform_request_autocomplete(request_type, recid, uid, data):
"""
Perfrom an AJAX request associated with the retrieval of autocomplete
data.
@param request_type: Type of the currently served request
@param recid: the identifer of the record
@param uid: The identifier of the user being currently logged in
@param data: The request data containing possibly important additional
arguments
"""
response = {}
# get the values based on which one needs to search
searchby = data['value']
#we check if the data is properly defined
fulltag = ''
if 'maintag' in data and 'subtag1' in data and \
'subtag2' in data and 'subfieldcode' in data:
maintag = data['maintag']
subtag1 = data['subtag1']
subtag2 = data['subtag2']
u_subtag1 = subtag1
u_subtag2 = subtag2
if (not subtag1) or (subtag1 == ' '):
u_subtag1 = '_'
if (not subtag2) or (subtag2 == ' '):
u_subtag2 = '_'
subfieldcode = data['subfieldcode']
fulltag = maintag+u_subtag1+u_subtag2+subfieldcode
if (request_type == 'autokeyword'):
#call the keyword-form-ontology function
if fulltag and searchby:
items = get_kbt_items_for_bibedit(CFG_BIBEDIT_KEYWORD_TAXONOMY, \
CFG_BIBEDIT_KEYWORD_RDFLABEL, \
searchby)
response['autokeyword'] = items
if (request_type == 'autosuggest'):
#call knowledge base function to put the suggestions in an array..
if fulltag and searchby and len(searchby) > 3:
#add trailing '*' wildcard for 'search_unit_in_bibxxx()' if not already present
suggest_values = get_kbd_values_for_bibedit(fulltag, "", searchby+"*")
#remove ..
new_suggest_vals = []
for sugg in suggest_values:
if sugg.startswith(searchby):
new_suggest_vals.append(sugg)
response['autosuggest'] = new_suggest_vals
if (request_type == 'autocomplete'):
#call the values function with the correct kb_name
if fulltag in CFG_BIBEDIT_AUTOCOMPLETE_TAGS_KBS:
kbname = CFG_BIBEDIT_AUTOCOMPLETE_TAGS_KBS[fulltag]
#check if the seachby field has semicolons. Take all
#the semicolon-separated items..
items = []
vals = []
if searchby:
if searchby.rfind(';'):
items = searchby.split(';')
else:
items = [searchby.strip()]
for item in items:
item = item.strip()
kbrvals = get_kbr_values(kbname, item, '', 'e') #we want an exact match
if kbrvals and kbrvals[0]: #add the found val into vals
vals.append(kbrvals[0])
#check that the values are not already contained in other
#instances of this field
record = get_cache_file_contents(recid, uid)[2]
xml_rec = wash_for_xml(print_rec(record))
record, status_code, dummy_errors = create_record(xml_rec)
existing_values = []
if (status_code != 0):
existing_values = record_get_field_values(record,
maintag,
subtag1,
subtag2,
subfieldcode)
#get the new values.. i.e. vals not in existing
new_vals = vals
for val in new_vals:
if val in existing_values:
new_vals.remove(val)
response['autocomplete'] = new_vals
response['resultCode'] = CFG_BIBEDIT_AJAX_RESULT_CODES_REV['autosuggestion_scanned']
return response
def perform_request_bibcatalog(request_type, recid, uid):
"""Handle request to BibCatalog (RT).
"""
response = {}
if request_type == 'getTickets':
# Insert the ticket data in the response, if possible
if bibcatalog_system is None:
response['tickets'] = "<!--No ticket system configured-->"
elif bibcatalog_system and uid:
bibcat_resp = bibcatalog_system.check_system(uid)
if bibcat_resp == "":
tickets_found = bibcatalog_system.ticket_search(uid, \
status=['new', 'open'], recordid=recid)
t_url_str = '' #put ticket urls here, formatted for HTML display
for t_id in tickets_found:
#t_url = bibcatalog_system.ticket_get_attribute(uid, \
# t_id, 'url_display')
ticket_info = bibcatalog_system.ticket_get_info( \
uid, t_id, ['url_display', 'url_close'])
t_url = ticket_info['url_display']
t_close_url = ticket_info['url_close']
#format..
t_url_str += "#" + str(t_id) + '<a href="' + t_url + \
'">[read]</a> <a href="' + t_close_url + \
'">[close]</a><br/>'
#put ticket header and tickets links in the box
t_url_str = "<strong>Tickets</strong><br/>" + t_url_str + \
"<br/>" + '<a href="new_ticket?recid=' + str(recid) + \
'>[new ticket]</a>'
response['tickets'] = t_url_str
#add a new ticket link
else:
#put something in the tickets container, for debug
response['tickets'] = "<!--"+bibcat_resp+"-->"
response['resultCode'] = 31
return response
def _add_curated_references_to_record(recid, uid, bibrec):
"""
Adds references from the cache that have been curated (contain $$9CURATOR)
to the bibrecord object
@param recid: record id, used to retrieve cache
@param uid: id of the current user, used to retrieve cache
@param bibrec: bibrecord object to add references to
"""
dummy1, dummy2, record, dummy3, dummy4, dummy5, dummy6 = get_cache_file_contents(recid, uid)
for field_instance in record_get_field_instances(record, "999", "C", "5"):
for subfield_instance in field_instance[0]:
if subfield_instance[0] == '9' and subfield_instance[1] == 'CURATOR':
# Add reference field on top of references, removing first $$o
field_instance = ([subfield for subfield in field_instance[0]
if subfield[0] != 'o'], field_instance[1],
field_instance[2], field_instance[3],
field_instance[4])
record_add_fields(bibrec, '999', [field_instance],
field_position_local=0)
def _xml_to_textmarc_references(bibrec):
"""
Convert XML record to textmarc and return the lines related to references
@param bibrec: bibrecord object to be converted
@return: textmarc lines with references
@rtype: string
"""
sysno = ""
options = {"aleph-marc":0, "correct-mode":1, "append-mode":0,
"delete-mode":0, "insert-mode":0, "replace-mode":0,
"text-marc":1}
# Using deepcopy as function create_marc_record() modifies the record passed
textmarc_references = [ line.strip() for line
in xmlmarc2textmarc.create_marc_record(copy.deepcopy(bibrec),
sysno, options).split('\n')
if '999C5' in line ]
return textmarc_references
def perform_request_ref_extract_url(recid, uid, url):
"""
Making use of the refextractor API, extract references from the url
received from the client
@param recid: opened record id
@param uid: active user id
@param url: URL to extract references from
@return response to be returned to the client code
"""
response = {}
try:
recordExtended = replace_references(recid, uid, url=url)
except FullTextNotAvailable:
response['ref_xmlrecord'] = False
response['ref_msg'] = "File not found. Server returned code 404"
return response
except:
response['ref_xmlrecord'] = False
response['ref_msg'] = """Error while fetching PDF. Bad URL or file could
not be retrieved """
return response
if not recordExtended:
response['ref_msg'] = """No references were found in the given PDF """
return response
ref_bibrecord = create_record(recordExtended)[0]
_add_curated_references_to_record(recid, uid, ref_bibrecord)
response['ref_bibrecord'] = ref_bibrecord
response['ref_xmlrecord'] = record_xml_output(ref_bibrecord)
textmarc_references = _xml_to_textmarc_references(ref_bibrecord)
response['ref_textmarc'] = '<div class="refextracted">' + '<br />'.join(textmarc_references) + "</div>"
return response
def perform_request_ref_extract(recid, uid, txt=None):
""" Handle request to extract references in the given record
@param recid: record id from which the references should be extracted
@type recid: str
@param txt: string containing references
@type txt: str
@param uid: user id
@type uid: int
@return: xml record with references extracted
@rtype: dictionary
"""
text_no_references_found_msg = """ No references extracted. The automatic
extraction did not recognize any reference in the
pasted text.<br /><br />If you want to add the references
manually, an easily recognizable format is:<br/><br/>
&nbsp;&nbsp;&nbsp;&nbsp;[1] Phys. Rev A71 (2005) 42<br />
&nbsp;&nbsp;&nbsp;&nbsp;[2] ATLAS-CMS-2007-333
"""
pdf_no_references_found_msg = """ No references were found in the attached
PDF.
"""
response = {}
response['ref_xmlrecord'] = False
recordExtended = None
try:
if txt:
recordExtended = replace_references(recid, uid,
txt=txt.decode('utf-8'))
if not recordExtended:
response['ref_msg'] = text_no_references_found_msg
else:
recordExtended = replace_references(recid, uid)
if not recordExtended:
response['ref_msg'] = pdf_no_references_found_msg
except FullTextNotAvailable:
response['ref_msg'] = """ The fulltext is not available.
"""
except:
response['ref_msg'] = """ An error ocurred while extracting references.
"""
if not recordExtended:
return response
ref_bibrecord = create_record(recordExtended)[0]
_add_curated_references_to_record(recid, uid, ref_bibrecord)
response['ref_bibrecord'] = ref_bibrecord
response['ref_xmlrecord'] = record_xml_output(ref_bibrecord)
textmarc_references = _xml_to_textmarc_references(ref_bibrecord)
response['ref_textmarc'] = '<div class="refextracted">' + '<br />'.join(textmarc_references) + "</div>"
return response
def perform_request_preview_record(request_type, recid, uid, data):
""" Handle request to preview record with formatting
"""
response = {}
if request_type == "preview":
if data["submitMode"] == "textmarc":
textmarc_record = data['textmarc']
xml_conversion_status = get_xml_from_textmarc(recid, textmarc_record)
if xml_conversion_status['resultMsg'] == 'textmarc_parsing_error':
response['resultCode'] = CFG_BIBEDIT_AJAX_RESULT_CODES_REV['textmarc_parsing_error']
response.update(xml_conversion_status)
return response
record = create_record(xml_conversion_status["resultXML"])[0]
elif cache_exists(recid, uid):
dummy1, dummy2, record, dummy3, dummy4, dummy5, dummy6 = get_cache_file_contents(recid, uid)
else:
record = get_bibrecord(recid)
# clean the record from unfilled volatile fields
record_strip_empty_volatile_subfields(record)
record_strip_empty_fields(record)
response['html_preview'] = _get_formated_record(record, data['new_window'])
# clean the record from unfilled volatile fields
record_strip_empty_volatile_subfields(record)
record_strip_empty_fields(record)
response['html_preview'] = _get_formated_record(record, data['new_window'])
return response
def perform_request_get_pdf_url(recid):
""" Handle request to get the URL of the attached PDF
"""
response = {}
rec_info = BibRecDocs(recid)
docs = rec_info.list_bibdocs()
doc_pdf_url = ""
for doc in docs:
try:
doc_pdf_url = doc.get_file('pdf').get_url()
except InvenioBibDocFileError:
continue
if doc_pdf_url:
response['pdf_url'] = doc_pdf_url
break
if not doc_pdf_url:
response['pdf_url'] = ""
return response
def perform_request_get_textmarc(recid, uid):
""" Get record content from cache, convert it to textmarc and return it
"""
textmarc_options = {"aleph-marc":0, "correct-mode":1, "append-mode":0,
"delete-mode":0, "insert-mode":0, "replace-mode":0,
"text-marc":1}
bibrecord = get_cache_file_contents(recid, uid)[2]
record_strip_empty_fields(bibrecord)
record_strip_controlfields(bibrecord)
textmarc = xmlmarc2textmarc.create_marc_record(
copy.deepcopy(bibrecord), sysno="", options=textmarc_options)
return {'textmarc': textmarc}
def perform_request_get_tableview(recid, uid, data):
""" Convert textmarc inputed by user to marcxml and if there are no
parsing errors, create cache file
"""
response = {}
textmarc_record = data['textmarc']
xml_conversion_status = get_xml_from_textmarc(recid, textmarc_record)
response.update(xml_conversion_status)
if xml_conversion_status['resultMsg'] == 'textmarc_parsing_error':
response['resultCode'] = CFG_BIBEDIT_AJAX_RESULT_CODES_REV['textmarc_parsing_error']
else:
create_cache_file(recid, uid,
create_record(xml_conversion_status['resultXML'])[0], data['recordDirty'])
response['resultCode'] = CFG_BIBEDIT_AJAX_RESULT_CODES_REV['tableview_change_success']
return response
def _get_formated_record(record, new_window):
"""Returns a record in a given format
@param record: BibRecord object
@param new_window: Boolean, indicates if it is needed to add all the headers
to the page (used when clicking Preview button)
"""
from invenio.config import CFG_WEBSTYLE_TEMPLATE_SKIN
xml_record = wash_for_xml(record_xml_output(record))
result = ''
if new_window:
result = """ <html><head><title>Record preview</title>
<script type="text/javascript" src="%(site_url)s/js/jquery.min.js"></script>
<link rel="stylesheet" href="%(site_url)s/img/invenio%(cssskin)s.css" type="text/css"></head>
"""%{'site_url': CFG_SITE_URL,
'cssskin': CFG_WEBSTYLE_TEMPLATE_SKIN != 'default' and '_' + CFG_WEBSTYLE_TEMPLATE_SKIN or ''
}
result += get_mathjax_header(True) + '<body>'
result += "<h2> Brief format preview </h2><br />"
result += bibformat.format_record(recID=None,
of="hb",
xml_record=xml_record) + "<br />"
result += "<br /><h2> Detailed format preview </h2><br />"
result += bibformat.format_record(recID=None,
of="hd",
xml_record=xml_record)
#Preview references
result += "<br /><h2> References </h2><br />"
result += bibformat.format_record(0,
'hdref',
xml_record=xml_record)
result += """<script>
$('#referenceinp_link').hide();
$('#referenceinp_link_span').hide();
</script>
"""
if new_window:
result += "</body></html>"
return result
########### Functions related to templates web interface #############
def perform_request_init_template_interface():
"""Handle a request to manage templates"""
errors = []
warnings = []
body = ''
# Add script data.
record_templates = get_record_templates()
record_templates.sort()
data = {'gRECORD_TEMPLATES': record_templates,
'gSITE_RECORD': '"' + CFG_SITE_RECORD + '"',
'gSITE_URL': '"' + CFG_SITE_URL + '"'}
body += '<script type="text/javascript">\n'
for key in data:
body += ' var %s = %s;\n' % (key, data[key])
body += ' </script>\n'
# Add scripts (the ordering is NOT irrelevant).
scripts = ['jquery-ui.min.js', 'json2.js']
bibedit_scripts = ['display.js', 'template_interface.js']
for script in scripts:
body += ' <script type="text/javascript" src="%s">' \
'</script>\n' % (url_for('static', filename='js/' + script), )
for script in bibedit_scripts:
body += ' <script type="text/javascript" src="%s">' \
'</script>\n' % (url_for('editor.static',
filename='js/editor/' + script), )
body += ' <div id="bibEditTemplateList"></div>\n'
body += ' <div id="bibEditTemplateEdit"></div>\n'
return body, errors, warnings
def perform_request_ajax_template_interface(data):
"""Handle Ajax requests by redirecting to appropriate function."""
response = {}
request_type = data['requestType']
if request_type == 'editTemplate':
# Edit a template request.
response.update(perform_request_edit_template(data))
return response
def perform_request_edit_template(data):
""" Handle request to edit a template """
response = {}
template_filename = data['templateFilename']
template = get_record_template(template_filename)
if not template:
response['resultCode'] = 1
else:
response['templateMARCXML'] = template
return response
def perform_doi_search(doi):
"""Search for DOI on the dx.doi.org page
@return: the url returned by this page"""
response = {}
url = "http://dx.doi.org/"
val = {'hdl': doi}
url_data = urllib.urlencode(val)
cj = cookielib.CookieJar()
header = [('User-Agent', CFG_DOI_USER_AGENT)]
opener = urllib2.build_opener(urllib2.HTTPCookieProcessor(cj))
opener.addheaders = header
try:
resp = opener.open(url, url_data)
except:
return response
else:
response['doi_url'] = resp.geturl()
return response

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