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R3600/invenio/utils/sherpa_romeo.py
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sherpa_romeo.py
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# -*- coding: utf-8 -*-
##
## This file is part of Invenio.
## Copyright (C) 2012, 2013 CERN.
##
## Invenio is free software; you can redistribute it and/or
## modify it under the terms of the GNU General Public License as
## published by the Free Software Foundation; either version 2 of the
## License, or (at your option) any later version.
##
## Invenio is distributed in the hope that it will be useful, but
## WITHOUT ANY WARRANTY; without even the implied warranty of
## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
## General Public License for more details.
##
## You should have received a copy of the GNU General Public License
## along with Invenio; if not, write to the Free Software Foundation, Inc.,
## 59 Temple Place, Suite 330, Boston, MA 02111-1307, USA.
from invenio.xmlDict import XmlDictConfig, ElementTree
import urllib2
from werkzeug.contrib.cache import RedisCache
from invenio.ext.cache import cache
class SherpaRomeoSearch(object):
"""
SHERPA/RoMEO API wrapper class to search Publishers and Journals
Queries the SHERPA/RoMEO API and parses the xml returned.
The search functions return the associated names.
(search_issn returns journal)
It uses Redis to cache all xml from queries and create a small Journal
and Publisher db.
For more detailed results the SherpaRomeoSearch.parser API must be used
that gives access to conditions, issn and single items on exact matches
@seealso: http://www.sherpa.ac.uk/romeo/api.html
"""
def __init__(self):
self.parser = SherpaRomeoXMLParser()
self.error = False
self.error_message = ""
def search_publisher(self, query):
"""
Search for Publishers
query: the query to be made
returns a list with publisher names
"""
# Search first for exact matches in cache
cached_publisher = cache.get("publisher:" + query.lower())
if cached_publisher is not None:
self.parser.set_single_item(publisher=cached_publisher,)
return cached_publisher['name']
cleanquery = query.replace(" ", "+")
url = "http://www.sherpa.ac.uk/romeo/api29.php?pub=" + cleanquery
self.parser.parse_url(url)
self.error = self.parser.error
self.error_message = self.parser.error_message
if not self.error:
return self.parser.get_publishers(attribute='name')
def search_journal(self, query, query_type='contains'):
"""
Search for Journals
query: the query to be made
query_type: it must be 'contains'(default), 'exact' or 'start'
returns a list with the specific journal titles or empty list
"""
if query_type is 'exact':
# Search first for exact matches in cache
cached_journal = cache.get("journal:" + query.lower())
if cached_journal is not None:
self.parser.set_single_item(journal=cached_journal)
return cached_journal['jtitle']
cleanquery = query.replace(" ", "+")
url = "http://www.sherpa.ac.uk/romeo/api29.php?jtitle=" + cleanquery + "&qtype=" + query_type
self.parser.parse_url(url)
self.error = self.parser.error
self.error_message = self.parser.error_message
if not self.error:
return self.parser.get_journals(attribute='jtitle')
def search_issn(self, issn):
""" Search for Journals based on ISSN """
url = "http://www.sherpa.ac.uk/romeo/api29.php?issn=" + issn
self.parser.parse_url(url)
self.error = self.parser.error
self.error_message = self.parser.error_message
if not self.error:
return self.parser.get_journals()
def get_num_hits(self):
return int(self.parser.xml['header']['numhits'])
class SherpaRomeoXMLParser(object):
def __init__(self):
self.parsed = False
self.single_item = False
self.error = False
self.error_message = ""
def parse_url(self, url):
self.url = url
#example
#url = 'http://www.sherpa.ac.uk/romeo/api29.php?jtitle=Annals%20of%20Physics'
found_journal = url.find("jtitle=")
found_publisher = url.find("pub=")
if found_journal != -1:
self.search_type = "journal_search"
self.query = url[found_journal + 7:(len(url) - 15)]
elif found_publisher != -1:
self.search_type = "publisher_search"
found_publisher = url.find("pub=")
self.query = url[found_publisher + 4:len(url)]
else:
self.search_type = "issn_search"
found_publisher = url.find("issn=")
self.query = url[found_publisher + 4:len(url)]
cached_xml = cache.get(self.search_type + ":" + self.query.lower())
if cached_xml is None:
try:
self.data = urllib2.urlopen(url).read()
except urllib2.HTTPError:
self.error = True
return
try:
root = ElementTree.XML(self.data)
except SyntaxError:
self.error = True
return
self.xml = XmlDictConfig(root)
outcome = self.xml['header']['outcome']
if outcome != 'failed' and outcome != 'notFound':
cache.set(self.search_type + ":" + self.query.lower(), self.xml,
999999999999)
else:
self.xml = cached_xml
#self.data = cached_xml
#root = ElementTree.XML(self.data)
#self.xml = XmlDictConfig(root)
if self.xml['header']['outcome'] == 'failed':
self.error = True
self.error_message = self.xml['header']['message']
self.parsed = True
self._cache_parsed_xml()
def _cache_parsed_xml(self):
""" Caches every Journal and Publisher found in the xml """
if not self.parsed:
return
outcome = self.xml['header']['outcome'] is 'notFound'
if outcome is 'notFound' or outcome is 'failed':
return
if self.xml['header']['outcome'] == 'singleJournal' \
or self.xml['header']['outcome'] == 'uniqueZetoc':
journal = self.xml['journals']['journal']
cache.set("journal:" + journal['jtitle'].lower(), journal, 999999999999)
if self.xml['header']['outcome'] != 'uniqueZetoc':
# if the publisher has been indexed by RoMEO
publisher = self.xml['publishers']['publisher']
# Associate a Journal with a Publisher key in cache
cache.set("journal-publisher:" + journal['jtitle'].lower(),
"publisher:" + publisher['name'].lower(), 999999999999)
elif self.xml['journals'] is not None:
for journal in self.xml['journals']['journal']:
cache.set("journal:" + journal['jtitle'].lower(), journal, 999999999999)
if self.xml['header']['numhits'] == '1' \
and self.xml['header']['outcome'] != 'uniqueZetoc':
publisher = self.xml['publishers']['publisher']
cache.set("publisher:" + publisher['name'].lower(), publisher, 999999999999)
elif self.xml['publishers'] is not None:
for publisher in self.xml['publishers']['publisher']:
cache.set("publisher:" + publisher['name'].lower(), publisher,
None)
def set_single_item(self, journal=None, publisher=None):
"""
Used to initialize the parser with items retrieved from cache
Note: if both a journal and a publisher are defined
the publisher is associated with the journal
"""
self.xml = dict()
self.xml['header'] = dict()
self.xml['header']['outcome'] = ''
if journal is not None:
self.xml['journals'] = dict()
self.xml['journals']['journal'] = journal
self.xml['header']['numhits'] = '1'
self.parsed = True
self.single_item = True
if publisher is not None:
# Associate a Journal with a Publisher key in cache
self.xml['header']['outcome'] = 'singleJournal'
cache.set("journal-publisher:" + journal['jtitle'].lower(),
"publisher:" + publisher['name'].lower(), 999999999999)
elif publisher is not None:
self.xml['header']['outcome'] = 'publisherFound'
self.xml['header']['numhits'] = '1'
self.xml['publishers'] = dict()
self.xml['publishers']['publisher'] = publisher
self.single_item = True
self.parsed = True
def get_single_item(self):
"""Returns a single item retrieved from cache."""
if self.single_item:
return self.xml
else:
return None
def get_journals(self, attribute=None):
"""Returns a list of journals.
If an attribute is defined, returns only this attribute from
every journal.
"""
if self.xml['header']['outcome'] == 'notFound' \
or self.xml['header']['outcome'] == 'failed':
return []
if self.xml['header']['outcome'] == 'singleJournal' \
or self.xml['header']['outcome'] == 'uniqueZetoc' \
or (self.single_item and self.xml['journals']['journal'] is not None):
if attribute is None:
return [self.xml['journals']['journal']]
elif self.xml['journals']['journal'][attribute] is not None:
return [self.xml['journals']['journal'][attribute]]
else:
return []
journals = list()
for j in self.xml['journals']['journal']:
if attribute is None:
journals.append(j)
else:
journals.append(j[attribute])
return journals
def get_publishers(self, attribute=None, journal=None,):
""" Returns a list of the publishers if a publisher search was made or
an empty list.
If a journal is defined, it returns the associated publisher
for this Journal or None. A journal definition makes the functions
to query again if the publisher isn't found in the xml or cache.
Note: If you define a journal, you must have searched for it first.
If an attribute is defined, returns only this attribute from
every publisher
"""
if self.xml['header']['outcome'] == 'notFound' \
or self.xml['header']['outcome'] == 'failed':
return None
if self.xml['header']['outcome'] == 'singleJournal':
return self.xml['publishers']['publisher']
if self.xml['header']['outcome'] == 'uniqueZetoc':
# the Publisher has not yet been indexed by RoMEO
return None
if journal is not None:
# search the cache for matches
publisher_key = cache.get("journal-publisher:" + journal.lower())
if publisher_key is not None:
return cache.get(publisher_key)
# Query again sherpa romeo db to get the publisher
s = SherpaRomeoSearch()
issn = self.get_journals(attribute='issn')[0]
if issn is not None:
s.search_issn(issn)
return s.parser.get_publishers()
else:
return None
publishers = list()
if self.xml['header']['outcome'] == 'publisherFound':
if self.xml['header']['numhits'] == '1':
p = self.xml['publishers']['publisher']
if attribute is None:
publishers.append(p)
else:
if p[attribute] is None:
return []
publishers.append(p[attribute])
else:
for p in self.xml['publishers']['publisher']:
if attribute is None:
publishers.append(p)
else:
publishers.append(p[attribute])
return publishers
def get_issn(self):
"""Returns the issn if the search returns a single Journal."""
if 'issn' in self.xml:
return self.xml['issn']
if self.xml['header']['outcome'] == 'notFound' \
or self.xml['header']['outcome'] == 'failed':
return None
if self.xml['header']['outcome'] == 'singleJournal'\
or self.xml['header']['outcome'] == 'uniqueZetoc':
return self.xml['journals']['journal']['issn']
else:
return None
issns = dict()
for j in self.xml['journals']['journal']:
issns[j['jtitle']] = j['issn']
return issns
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