plot_spikes.py
82b931897c27master

plot_spikes.py
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			# -- coding: utf-8 --
			# @Author: Theo Lemaire
			# @Email: theo.lemaire@epfl.ch
			# @Date: 2017-02-13 12:41:26
			# @Last Modified by: Theo Lemaire
			# @Last Modified time: 2019-11-06 16:03:16

			''' Plot spikes diagrams of specific simulation output variables. '''

			import matplotlib.pyplot as plt

			from PySONIC.utils import logger
			from PySONIC.plt import SpikesDiagram
			from PySONIC.parsers import PlotParser


			def main():
			parser = PlotParser()
			parser.addRelativeTimeBounds()
			args = parser.parse()
			logger.setLevel(args['loglevel'])

			# Plot spikes diagram
			phase_diag = SpikesDiagram(args['inputfiles'], args['plot'][0])
			phase_diag.render(
			trange=args['trange'],
			rel_tbounds=args['rel_tbounds'],
			labels=args['labels'],
			prettify=args['pretty'],
			cmap=args['cmap'],
			cscale=args['cscale']
			)

			if not args['hide']:
			plt.show()


			if __name__ == '__main__':
			main()