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Thu, Sep 19, 23:09
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text/x-python
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Sat, Sep 21, 23:09 (2 d)
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blob
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R4670 PySONIC (old)
setup.py
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#!/usr/bin/env python
# -*- coding: utf-8 -*-
# @Author: Theo Lemaire
# @Date: 2017-06-13 09:40:02
# @Email: theo.lemaire@epfl.ch
# @Last Modified by: Theo Lemaire
# @Last Modified time: 2018-04-17 18:06:04
from
setuptools
import
setup
def
readme
():
with
open
(
'README.md'
,
encoding
=
"utf8"
)
as
f
:
return
f
.
read
()
setup
(
name
=
'PointNICE'
,
version
=
'1.0'
,
description
=
'A Python framework to predict the electrical response of various neuron types
\
to ultrasonic stimulation, according to the Neuronal Intramembrane Cavitation
\
Excitation (NICE) model. The framework couples an optimized implementation of
\
the Bilayer Sonophore (BLS) model with Hodgkin-Huxley "point-neuron" models.'
,
long_description
=
readme
(),
url
=
'???'
,
classifiers
=
[
'Development Status :: 4 - Beta'
,
'Intended Audience :: Science/Research'
,
'Programming Language :: Python :: 3'
,
'Topic :: Scientific/Engineering :: Physics'
],
keywords
=
(
'ultrasound ultrasonic neuromodulation neurostimulation excitation
\
biophysical model intramembrane cavitation NICE'
),
author
=
'Théo Lemaire'
,
author_email
=
'theo.lemaire@epfl.ch'
,
license
=
'MIT'
,
packages
=
[
'PointNICE'
],
scripts
=
[
'sim/run_ESTIM.py'
,
'sim/run_ASTIM.py'
],
install_requires
=
[
'numpy>=1.10'
,
'scipy>=0.17'
,
'matplotlib>=2'
'pandas>=0.21'
,
'openpyxl>=2.4'
,
'pyyaml>=3.11'
,
'pycallgraph>=1.0.1'
,
'colorlog>=3.0.1'
,
'progressbar2>=3.18.1'
,
'lockfile>=0.1.2'
],
zip_safe
=
False
)
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