Diffusion PySONIC (old) (master) History

sundt.py
master1a8775592b0ced4c004d649…

Jun 5 2021

modified sundt spike detection settings
1a8775592b0c
·tlemaire on Jun 5 2021, 15:32.

Jul 21 2020

specified logger handler stream to sys.stdout to avoid red background in…
fd4b6531e872
·tlemaire on Jul 21 2020, 20:03.
introduced default celsius (36°C) as a PointNeuron property shared by all…
42a3be29b47b
·tlemaire on Jul 21 2020, 16:18.
added celsius parameter (36.0) to cortical and thalamic neurons.
133be2f739dd
·tlemaire on Jul 21 2020, 15:41.

Mar 31 2020

added ASTIM_REL_CONV_THR to constants file.
9239911c1f35
·tlemaire on Mar 31 2020, 18:41.

Mar 27 2020

renamed fibers point-neuron models for better interpretability. completed fiber…
8f0bbde630a7
·tlemaire on Mar 27 2020, 20:37.

Mar 19 2020

added polyfit amd extrapolate capabilities to Lookup class.
066e8e416305
·tlemaire on Mar 19 2020, 12:13.

Feb 27 2020

added better handling of ybounds in timeseries. added MRG neuron class.
a46f7227e040
·tlemaire on Feb 27 2020, 23:02.

Feb 11 2020

added copy method to all model classes. added TI US notebook. updated…
68961385d17e
·tlemaire on Feb 11 2020, 07:55.

Feb 3 2020

Created AcousticSource class to be used for US simulations.
9d0666784d2d
·tlemaire on Feb 3 2020, 14:26.

Nov 26 2019

commented useless parameters in Sundt class
977bea19e55e
·tlemaire on Nov 26 2019, 18:40.

Nov 25 2019

added Eleak logging upon Sundt class creation.
647c007ad5d7
·tlemaire on Nov 25 2019, 12:22.

Nov 22 2019

cleaned up Sundt class
974a5f7d7fef
·tlemaire on Nov 22 2019, 18:42.
corrected borg-graham formalism methods
b46ab57b16d3
·tlemaire on Nov 22 2019, 18:36.

Nov 7 2019

checked iM taup against ref. (Yamada 1989)
fa8f94b4198c
·tlemaire on Nov 7 2019, 14:43.
added PointNeuron alphaBorgGaham and betaBorgGraham methods, now used for sundt…
f1d2ab4cfb4b
·tlemaire on Nov 7 2019, 12:44.

Nov 6 2019

renamed PhaseDiagram to SpikePlot (more appropriate). simplified Sundt model…
163afcce99af
·tlemaire on Nov 6 2019, 19:33.
modified nbls.QSSderivatives and nbls.__simQSS to work with any specified…
a2c1e3e2eb02
·tlemaire on Nov 6 2019, 15:46.

Nov 5 2019

renamed iKm to iM and kmk gate to p in Sundt to match formalism ot Cortical…
7a48bab58176
·tlemaire on Nov 5 2019, 22:35.
parametrized Caiinf in sundt model (checked for correct equivalence at Vm0)
54b7854b35c3
·tlemaire on Nov 5 2019, 18:16.
corrected error in effvars for plotGatingKinetics
15f0e82253ac
·tlemaire on Nov 5 2019, 17:17.
corrected Ikd kinetics (n and l zeta signs matching those of Borg-Graham 1991…
7a4a9166c1ad
·tlemaire on Nov 5 2019, 16:14.
Sign correction and comments
58e5ce4415c8
·vicari on Nov 5 2019, 14:31.
Correction in potassium kinetics
fc00bf556d5f
·vicari on Nov 5 2019, 13:29.
Correction of the delayed rectifier potassium kinetics
a35753429a7e
·vicari on Nov 5 2019, 13:15.

Nov 1 2019

added time step reduction to sundt class. code is running but simulations and…
83ea55354a98
·tlemaire on Nov 1 2019, 17:49.
debugged sundt class (estim now running)
894410e31f4a
·tlemaire on Nov 1 2019, 17:38.
further corrections to the sundt class, and implementation of Eleak computation…
3d652adfb7ce
·tlemaire on Nov 1 2019, 17:36.
identified parameters in Sundt expressions and highlighted discrepancies with…
5a508487f9f1
·tlemaire on Nov 1 2019, 17:08.
corrected errors in sundt class (now compiling). minf and taum both seem off…
eb70f6afb883
·tlemaire on Nov 1 2019, 14:54.
implemented Sundt model
1a18aaa3abec
·vicari on Nov 1 2019, 14:40.

Oct 10 2019

added Lookup.tile and modified SmartLookup.projectDC. modified nbls.
aee2c4e6cb21
·tlemaire on Oct 10 2019, 16:48.

R4670/PySONIC/neurons/sundt.pymaster1a8775592b0ced4c004d649…

Jun 5 2021

Jul 21 2020

Mar 31 2020

Mar 27 2020

Mar 19 2020

Feb 27 2020

Feb 11 2020

Feb 3 2020

Nov 26 2019

Nov 25 2019

Nov 22 2019

Nov 7 2019

Nov 6 2019

Nov 5 2019

Nov 1 2019

Oct 10 2019

R4670/PySONIC/neurons/sundt.py
master1a8775592b0ced4c004d649…