flowToVectorImage_test.m
6862d18c2c4dmaster

flowToVectorImage_test.m
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			fnIJ='/Applications/MATLAB_R2016a.app/java/jar/ij.jar'; % Path to "ij.jar"
			fnMIJ='/Applications/MATLAB_R2016a.app/java/jar/mij.jar'; % Path to "mij.jar"

			%%
			javaaddpath(fnIJ);
			javaaddpath(fnMIJ);

			vectorFlow=zeros(512,512,199);
			for i = 1:2
			wx = importdata(['/Users/florianaymanns/PhD/Registration/results_cluster/4_170609_fly1_001/wx_frame',num2str(i),'.dat']);
			wy = importdata(['/Users/florianaymanns/PhD/Registration/results_cluster/4_170609_fly1_001/wy_frame',num2str(i),'.dat']);
			w = cat(3,wx,wy);
			vectorFlow(:,:,i) = flowToVectorImage(w,[18,18],[512,512],i,'./tmp/');
			end
			mijwrite_stack(single(vectorFlow),'./tmp/complete.tif');