{
	"auto_complete":
	{
		"selected_items":
		[
			[
				"set",
				"setPrecision\t(dumper.hh)"
			],
			[
				"dump",
				"dumper"
			],
			[
				"serie",
				"seriestype"
			],
			[
				"file",
				"filecode"
			],
			[
				"write",
				"write.hh\t(write.cc)"
			],
			[
				"Compute",
				"ComputePi"
			],
			[
				"Com",
				"ComputePi"
			],
			[
				"method",
				"method_label"
			],
			[
				"a",
				"argv"
			],
			[
				"ai",
				"arithmetic.hh\t(README.md)"
			],
			[
				"inc",
				"includes\tfunc"
			],
			[
				"Dump",
				"DumperSeries"
			],
			[
				"line",
				"linewidth"
			],
			[
				"sf",
				"sinf"
			],
			[
				"itre",
				"iterations"
			],
			[
				"com",
				"ComputePi\tclass"
			],
			[
				"compu",
				"ComputeArithmetic\tclass"
			],
			[
				"seri",
				"seriestype"
			],
			[
				"plot",
				"plotSurface"
			],
			[
				"inter",
				"intersectSets"
			],
			[
				"map2",
				"map2Set"
			],
			[
				"ia",
				"I-algorithm\tinc"
			],
			[
				"sta",
				"stack_values"
			],
			[
				"heap",
				"heap_allocation"
			],
			[
				"vae",
				"values"
			],
			[
				"es",
				"else\t(ex1.cc)"
			],
			[
				"tan",
				"tanhx2"
			],
			[
				"arg",
				"argc"
			],
			[
				"zoom",
				"zoom_xbounds"
			],
			[
				"get_xl",
				"get_xticklabels\t(effvars.py)"
			],
			[
				"F",
				"False"
			],
			[
				"plotEf",
				"plotEffectiveCapacitance\t(effvars.py)"
			],
			[
				"main",
				"mainfig"
			],
			[
				"Cm",
				"Cmbounds"
			],
			[
				"look",
				"lookups2D"
			],
			[
				"Fr",
				"FRbounds"
			],
			[
				"comp",
				"comprates"
			],
			[
				"1e3",
				"1e-3"
			],
			[
				"flul",
				"full_fpaths\tparam"
			],
			[
				"full",
				"full_comprates"
			],
			[
				"mu",
				"mu_full_comptimes"
			],
			[
				"read_",
				"read_csv\tfunction"
			],
			[
				"sonic_",
				"sonic_comptimes"
			],
			[
				"ind",
				"index_col"
			],
			[
				"plo",
				"plotSpikingMetrics\tfunction"
			],
			[
				"lo",
				"logscale"
			],
			[
				"cool",
				"colors_dict"
			],
			[
				"Dc",
				"DCs"
			],
			[
				"spike",
				"spikeamp"
			],
			[
				"metri",
				"metrics_dict"
			],
			[
				"color",
				"colors"
			],
			[
				"sonci",
				"sonic_metrics"
			],
			[
				"fre",
				"frequency\t(comp_spikemetrics_CW_vs_frequency.py)"
			],
			[
				"am",
				"amplitudes"
			],
			[
				"upd",
				"updated_queue"
			],
			[
				"fp",
				"fpaths"
			],
			[
				"cre",
				"createSimQueue\tfunction"
			],
			[
				"empt",
				"empty_like\t(fig3.py)"
			],
			[
				"fig",
				"figset"
			],
			[
				"in",
				"inputdir"
			],
			[
				"CW",
				"CW_sonic_fpaths"
			],
			[
				"plotC",
				"plotComp"
			],
			[
				"son",
				"sonic"
			],
			[
				"sonic",
				"sonic_metrics"
			],
			[
				"toff",
				"toffset"
			],
			[
				"AS",
				"ASTIM_filecode\tfunction"
			],
			[
				"titration",
				"titration_file"
			],
			[
				"load",
				"loads\tfunction"
			],
			[
				"jon",
				"json"
			],
			[
				"neu",
				"neurons"
			],
			[
				"Ath",
				"Athrs_sparse"
			],
			[
				"DC",
				"DCs_sparse"
			],
			[
				"font",
				"fontsize=fs"
			],
			[
				"get",
				"get"
			],
			[
				"linewidth",
				"linewidth=0.5"
			],
			[
				"set_",
				"set_yticks"
			],
			[
				"Cort",
				"CorticalLTS"
			],
			[
				"cm2",
				"cm2inch"
			],
			[
				"rgxp",
				"rgxp_mech"
			],
			[
				"fra",
				"frameon\t(pltutils.py)"
			],
			[
				"actmap_fil",
				"actmap_filename"
			],
			[
				"Neuron",
				"NeuronalBilayerSonophore\tclass"
			],
			[
				"sele",
				"selectDirDialog"
			],
			[
				"Arg",
				"ArgumentParser\tclass"
			],
			[
				"mesh",
				"meshedges"
			],
			[
				"FR",
				"FR_bounds\tstatement"
			],
			[
				"FR_",
				"FR_scale"
			],
			[
				"input",
				"inputdir"
			],
			[
				"Neur",
				"NeuronalBilayerSonophore\t(nbls.py)"
			],
			[
				"im",
				"import"
			],
			[
				"getLo",
				"getLookups2D"
			],
			[
				"MECH",
				"MECH_filecode"
			],
			[
				"ES",
				"ESTIM_filecode"
			],
			[
				"el",
				"elec"
			],
			[
				"none",
				"None\tkeyword"
			],
			[
				"output",
				"outputs"
			],
			[
				"lookups",
				"lookups4D"
			],
			[
				"lok",
				"lookups"
			],
			[
				"pl",
				"plt"
			],
			[
				"Sav",
				"SaveFileDialog"
			],
			[
				"Save",
				"SaveFigDialog"
			],
			[
				"MEC",
				"MECH_title"
			],
			[
				"pkl",
				"pkl_filepath"
			],
			[
				"ge",
				"getNeuronLookupsFile\tfunction"
			],
			[
				"Lenn",
				"LennardJones\t(bls.py)"
			],
			[
				"In",
				"Intensity2Pressure"
			],
			[
				"out",
				"outdir"
			],
			[
				"dat",
				"date_str"
			],
			[
				"Bila",
				"BilayerSonophore"
			],
			[
				"tco",
				"tcomp\t(utils.py)"
			],
			[
				"log",
				"logentry"
			],
			[
				"filen",
				"filename"
			],
			[
				"sheet",
				"sheetname"
			],
			[
				"default",
				"defaults"
			],
			[
				"ne",
				"neurons"
			],
			[
				"neuron",
				"neuron_str"
			],
			[
				"nr",
				"neurons\tstatement"
			],
			[
				"Th",
				"ThalamicRE\tclass"
			],
			[
				"Py",
				"PySONIC"
			],
			[
				"pos",
				"postpro\tmodule"
			],
			[
				"__",
				"__main__"
			],
			[
				"Neu",
				"NeuronalBilayerSonophore\t(ASTIM.py)"
			],
			[
				"simul",
				"simulate"
			],
			[
				"sim",
				"simulate\t(sonic.py)"
			],
			[
				"neurons",
				"neurons_str"
			],
			[
				"eff",
				"eff_coeffs"
			],
			[
				"no",
				"nofreq_queue"
			],
			[
				"Sonci",
				"SonicNeuron\t(sonic.py)"
			]
		]
	},
	"buffers":
	[
		{
			"file": "work/week6/series/homework2/src/dumper.hh",
			"settings":
			{
				"buffer_size": 599,
				"encoding": "UTF-8",
				"line_ending": "Windows"
			}
		},
		{
			"file": "work/week6/series/homework2/src/print.hh",
			"settings":
			{
				"buffer_size": 439,
				"encoding": "UTF-8",
				"line_ending": "Windows"
			}
		},
		{
			"file": "work/week6/series/homework2/src/write.hh",
			"settings":
			{
				"buffer_size": 430,
				"encoding": "UTF-8",
				"line_ending": "Windows"
			}
		},
		{
			"file": "work/week6/series/homework2/src/main.cc",
			"settings":
			{
				"buffer_size": 1837,
				"encoding": "UTF-8",
				"line_ending": "Windows"
			}
		},
		{
			"file": "work/week6/series/homework2/src/print.cc",
			"settings":
			{
				"buffer_size": 876,
				"encoding": "UTF-8",
				"line_ending": "Windows"
			}
		},
		{
			"file": "lectures/code_snippets/fstream.cpp",
			"settings":
			{
				"buffer_size": 291,
				"line_ending": "Windows"
			}
		},
		{
			"file": "work/week6/series/homework2/src/dumper.cc",
			"settings":
			{
				"buffer_size": 119,
				"encoding": "UTF-8",
				"line_ending": "Windows"
			}
		},
		{
			"file": "work/week6/series/homework2/src/write.cc",
			"settings":
			{
				"buffer_size": 1064,
				"encoding": "UTF-8",
				"line_ending": "Windows"
			}
		}
	],
	"build_system": "",
	"build_system_choices":
	[
	],
	"build_varint": "",
	"command_palette":
	{
		"height": 357.0,
		"last_filter": "",
		"selected_items":
		[
			[
				"stat",
				"Git: Status"
			],
			[
				"ubu",
				"Ubuntu Bash"
			],
			[
				"ubun",
				"Ubuntu Bash"
			],
			[
				"push",
				"Git: Push"
			],
			[
				"comm",
				"Git: Quick Commit (repo)"
			],
			[
				"ana",
				"Anaconda Prompt"
			],
			[
				"commit",
				"Git: Quick Commit (repo)"
			],
			[
				"log",
				"Git: Log All"
			],
			[
				"com",
				"Git: Commit"
			],
			[
				"commi",
				"Git: Quick Commit (repo)"
			],
			[
				"previ",
				"Markdown Preview: Preview in Browser"
			],
			[
				"pre",
				"Markdown Preview: Preview in Browser"
			],
			[
				"sta",
				"Git: Status"
			],
			[
				"list",
				"Package Control: List Packages"
			],
			[
				"sid",
				"View: Toggle Side Bar"
			],
			[
				"pus",
				"Git: Push"
			],
			[
				"side",
				"View: Toggle Side Bar"
			],
			[
				"ub",
				"Ubuntu Bash"
			],
			[
				"ins",
				"Package Control: Install Package"
			],
			[
				"term",
				"Terminal"
			],
			[
				"rein",
				"Indentation: Reindent Lines"
			],
			[
				"inden",
				"Indentation: Reindent Lines"
			],
			[
				"comman",
				"Preferences: Commands - User"
			],
			[
				"git list",
				"Git: Stash List"
			],
			[
				"lint",
				"SublimeLinter: Lint This View"
			],
			[
				"ter",
				"Terminal"
			],
			[
				"li",
				"Package Control: List Packages"
			],
			[
				"lin",
				"SublimeLinter: Lint This View"
			],
			[
				"insta",
				"Package Control: Install Package"
			],
			[
				"remo",
				"Package Control: Remove Package"
			],
			[
				"sublimelinter",
				"SublimeLinter: Toggle Highlights"
			],
			[
				"ab",
				"About"
			],
			[
				"te",
				"Terminal"
			],
			[
				"git stat",
				"Git: Status"
			],
			[
				"go",
				"Anaconda: Goto object assignment"
			],
			[
				"go to",
				"Anaconda: Goto object assignment"
			],
			[
				"got",
				"Anaconda: Goto object assignment"
			],
			[
				"temr",
				"Terminal"
			],
			[
				"git",
				"Git: Status"
			],
			[
				"st",
				"Git: Status"
			],
			[
				"bar",
				"View: Toggle Side Bar"
			],
			[
				"",
				"About"
			],
			[
				"prev",
				"Markdown Preview: Preview in Browser"
			],
			[
				"prett",
				"Pretty JSON: Format (Pretty Print) JSON"
			],
			[
				"inst",
				"Package Control: Install Package"
			],
			[
				"statu",
				"Git: Status"
			],
			[
				"git commi",
				"Git: Quick Commit (repo)"
			],
			[
				"comit",
				"Git: Quick Commit (repo)"
			],
			[
				"mak",
				"Markdown Preview: Preview in Browser"
			],
			[
				"git commit ",
				"Git: Quick Commit (repo)"
			],
			[
				"git add",
				"Git: Add All"
			],
			[
				"status",
				"Git: Status"
			],
			[
				"packa",
				"Preferences: Browse Packages"
			],
			[
				"goto",
				"Package Control: Discover Packages"
			],
			[
				"repl p",
				"SublimeREPL: Python - IPython"
			],
			[
				"repl py",
				"SublimeREPL: Python"
			],
			[
				"theme",
				"UI: Select Color Scheme"
			],
			[
				"list pa",
				"Package Control: List Packages"
			],
			[
				"lo",
				"Git: Log All"
			],
			[
				"commitr",
				"Git: Quick Commit (repo)"
			],
			[
				"git repo",
				"Git: Quick Commit (repo)"
			],
			[
				"commit repo",
				"Git: Quick Commit (repo)"
			],
			[
				"doc",
				"Anaconda: Display object docs"
			],
			[
				"pu",
				"Git: Push"
			],
			[
				"auto",
				"Anaconda: Autoformat PEP8 Errors"
			],
			[
				"git st",
				"Git: Status"
			],
			[
				"them",
				"Colorsublime: Install Theme"
			],
			[
				"intall",
				"Package Control: Install Package"
			],
			[
				"boxy",
				"Boxy Theme: Preferences"
			],
			[
				"color",
				"Colorsublime: Install Theme"
			],
			[
				"colo",
				"Colorsublime: Install Theme"
			],
			[
				"in",
				"Package Control: Install Package"
			]
		],
		"width": 454.0
	},
	"console":
	{
		"height": 171.0,
		"history":
		[
			"cls",
			"clear"
		]
	},
	"distraction_free":
	{
		"menu_visible": true,
		"show_minimap": false,
		"show_open_files": false,
		"show_tabs": false,
		"side_bar_visible": false,
		"status_bar_visible": false
	},
	"expanded_folders":
	[
		"/C/Users/Theo/Documents/SP4E18",
		"/C/Users/Theo/Documents/SP4E18/lectures",
		"/C/Users/Theo/Documents/SP4E18/lectures/code_snippets"
	],
	"file_history":
	[
		"/C/Users/Theo/Documents/SP4E18/work/week6/series/homework2/build/log.txt",
		"/C/Users/Theo/Documents/SP4E18/SP4E18.sublime-project",
		"/C/Users/Theo/Documents/SP4E18/lectures/code_snippets/sstream_main_arguments.cpp",
		"/C/Users/Theo/Desktop/main.cc",
		"/C/Users/Theo/Documents/SP4E18/work/week6/series/homework2/src/main.cc",
		"/C/Users/Theo/Documents/SP4E18/README.md",
		"/C/Users/Theo/Documents/SP4E18/work/week6/series/homework2/src/CMakeLists.txt",
		"/C/Users/Theo/Documents/SP4E18/work/week6/series/homework2/src/series.hh",
		"/C/Users/Theo/Documents/SP4E18/work/week6/series/homework2/src/plot_results.py",
		"/C/Users/Theo/Documents/SP4E18/work/week6/series/homework2/build/computearithmetic.csv",
		"/C/Users/Theo/Documents/SP4E18/work/week6/series/homework2/src/write.cc",
		"/C/Users/Theo/Documents/SP4E18/work/week6/series/homework2/src/arithmetic.hh",
		"/C/Users/Theo/Documents/SP4E18/work/week6/series/homework2/src/pi.hh",
		"/C/Users/Theo/Documents/SP4E18/work/week6/series/homework2/src/pi.cc",
		"/C/Users/Theo/Documents/SP4E18/work/week6/series/homework2/src/arithmetic.cc",
		"/C/Users/Theo/Documents/SP4E18/work/week6/series/homework2/src/write.hh$.cpp",
		"/C/Users/Theo/Documents/SP4E18/work/week6/series/homework2/README.md",
		"/C/Users/Theo/Documents/SP4E18/work/week6/series/homework2/src/algebraic.hh",
		"/C/Users/Theo/Documents/SP4E18/work/week6/series/homework2/src/algebraic.cc",
		"/C/Users/Theo/Documents/SP4E18/work/week6/series/homework2/src/dumper.hh",
		"/C/Users/Theo/Documents/SP4E18/work/week6/series/homework2/src/README.md",
		"/C/Users/Theo/Documents/SP4E18/work/week6/series/homework2/.gitignore",
		"/C/Users/Theo/Documents/SP4E18/work/week4/conjugate_gradient/optimizer.py",
		"/C/Users/Theo/Documents/SP4E18/.gitignore",
		"/C/Users/Theo/Documents/SP4E18/lectures/.gitignore",
		"/C/Users/Theo/Documents/SP4E18/work/week4/conjugate_gradient/conjugate_gradient.py",
		"/C/Users/Theo/Documents/SP4E18/work/week5/series/dumper.py",
		"/C/Users/Theo/Documents/SP4E18/work/week5/series/series.py",
		"/C/Users/Theo/Documents/SP4E18/work/.gitignore",
		"/C/Users/Theo/Documents/SP4E18/work/week2/pi/sources/main.cc",
		"/C/Users/Theo/Documents/SP4E18/work/week5/Series.py",
		"/C/Users/Theo/Documents/SP4E18/work/week5/ComputeArithmetic.py",
		"/C/Users/Theo/Documents/SP4E18/exercises/week1/python-hello/sources/hello.py",
		"/C/Users/Theo/Downloads/2dcollections3d_demo.py",
		"/C/Users/Theo/Documents/SP4E-TNE18/work/week3/stl/starting_point/memory_third.cc",
		"/C/Users/Theo/Documents/SP4E-TNE18/work/week3/stl/starting_point/memory_second.cc",
		"/C/Users/Theo/Documents/SP4E-TNE18/work/week3/stl/starting_point/memory_first.cc",
		"/C/Users/Theo/Documents/SP4E-TNE18/work/week3/stl/starting_point/CMakeLists.txt",
		"/C/Users/Theo/Documents/SP4E-TNE18/work/week3/stl/starting_point/ex6.cc",
		"/C/Users/Theo/Documents/SP4E-TNE18/work/week3/stl/starting_point/ex5.cc",
		"/C/Users/Theo/Documents/SP4E-TNE18/work/.gitignore",
		"/C/Users/Theo/Documents/SP4E-TNE18/work/week3/stl/starting_point/ex2.cc",
		"/C/Users/Theo/Documents/SP4E-TNE18/work/week3/stl/starting_point/build/cmake_install.cmake",
		"/C/Users/Theo/Documents/SP4E-TNE18/work/week3/stl/starting_point/build/CMakeFiles/Makefile2",
		"/C/Users/Theo/Documents/SP4E-TNE18/work/week3/stl/starting_point/build/Makefile",
		"/C/Users/Theo/AppData/Roaming/Sublime Text 3/Packages/User/Default.sublime-commands",
		"/C/Users/Theo/Documents/fit Vmeff/fit_Vmeff.py",
		"/C/Users/Theo/Documents/BCdemystifier/init.txt",
		"/C/Users/Theo/Documents/BCdemystifier/New Text Document.txt",
		"/C/Users/Theo/Documents/BCdemystifier/.gitignore",
		"/C/Users/Theo/Documents/SP4E-TNE18/work/week3/stl/starting_point/ex3.cc",
		"/C/Users/Theo/Documents/SP4E-TNE18/work/week3/stl/starting_point/ex1.cc",
		"/C/Users/Theo/Documents/SP4E-TNE18/SP4E-TNE18.sublime-project",
		"/C/Users/Theo/Documents/SP4E-TNE18/work/week3/stl/starting_point/build/toto.txt",
		"/C/Users/Theo/Documents/SP4E-TNE18/work/week2/hello/sources/hello.cc",
		"/C/Users/Theo/Documents/SP4E-TNE18/work/week2/float/sources/main.cc",
		"/C/Users/Theo/Documents/SP4E-TNE18/work/week2/pi/sources/main.cc",
		"/C/Users/Theo/Documents/SP4E-TNE18/work/week2/hello/sources/series.cc",
		"/C/Users/Theo/Documents/SP4E-TNE18/work/week2/hello/sources/series.hh",
		"/C/Users/Theo/AppData/Roaming/Sublime Text 3/Packages/User/ubuntu_bash.py",
		"/C/Users/Theo/AppData/Roaming/Sublime Text 3/Packages/User/anaconda_prompt.py",
		"/C/Users/Theo/Documents/SP4E-TNE18/work/week2/hello/sources/CMakeLists.txt",
		"/C/Users/Theo/Documents/SP4E-TNE18/.gitignore",
		"/C/Users/Theo/Documents/SP4E-TNE18/test.cpp",
		"/C/Users/Theo/Documents/SP4E-TNE18/work/week2/hello/sources/build/CMakeFiles/Makefile2",
		"/C/Users/Theo/Documents/SP4E-TNE18/lectures/list-package-Debian.txt",
		"/C/Users/Theo/Documents/SP4E-TNE18/work/week2/hello/sources/build/CMakeCache.txt",
		"/C/Users/Theo/Documents/SP4E-TNE18/work/week2/hello/sources/build/hello",
		"/C/Users/Theo/Documents/SP4E-TNE18/work/week3/stl/starting_point/empty_main.cc",
		"/C/Users/Theo/Desktop/key.txt",
		"/C/Users/Theo/Documents/PySONIC/paper figures/fig7.py",
		"/C/Users/Theo/Documents/PySONIC/paper figures/fig4.py",
		"/C/Users/Theo/Documents/PySONIC/paper figures/fig3.py",
		"/C/Users/Theo/Documents/PySONIC/paper figures/fig2.py",
		"/C/Users/Theo/Desktop/SONIC paper data/Fig 7 - behavior maps/behavior_maps.py",
		"/C/Users/Theo/Documents/PySONIC/PySONIC/plt/effvars.py",
		"/C/Users/Theo/Documents/PySONIC/PySONIC/plt/__init__.py",
		"/C/Users/Theo/Desktop/SONIC paper data/Fig 3 - QS approximation/test_subthr_mech.py",
		"/C/Users/Theo/Documents/PySONIC/paper figures/fig5.py",
		"/C/Users/Theo/Documents/PySONIC/paper figures/fig6.py",
		"/C/Users/Theo/Documents/PySONIC/PySONIC/plt/actmap.py",
		"/C/Users/Theo/Documents/PySONIC/paper figures/utils.py",
		"/C/Users/Theo/Desktop/SONIC paper data/Fig 5-6 - model validation/PW DC/comp_comprates_PW_vs_DC.py",
		"/C/Users/Theo/Desktop/test.py",
		"/C/Users/Theo/Desktop/SONIC paper data/Fig 5-6 - model validation/CW amplitude/comp_comprates_CW_vs_amplitude.py",
		"/C/Users/Theo/Desktop/SONIC paper data/Fig 5-6 - model validation/CW regimes/comp_comprates_CW_vs_regimes.py",
		"/C/Users/Theo/Documents/PySONIC/PySONIC/utils.py",
		"/C/Users/Theo/Desktop/SONIC paper data/Fig 5-6 - model validation/PW PRF/comp_traces_PW_vs_PRF.py",
		"/C/Users/Theo/Documents/PySONIC/PySONIC/postpro.py",
		"/C/Users/Theo/Documents/PySONIC/paper figures/fig5-6.py",
		"/C/Users/Theo/Documents/PySONIC/PySONIC/plt/spikemetrics.py",
		"/C/Users/Theo/Desktop/SONIC paper data/Fig 5-6 - model validation/PW DC/comp_spikemetrics_PW_vs_DC.py",
		"/C/Users/Theo/Documents/PySONIC/PySONIC/plt/comp.py",
		"/C/Users/Theo/Desktop/SONIC paper data/Fig 5-6 - model validation/PW DC/comp_traces_PW_vs_DC.py",
		"/C/Users/Theo/Documents/PySONIC/PySONIC/batches.py",
		"/C/Users/Theo/Desktop/SONIC paper data/Fig 5-6 - model validation/CW frequency/comp_traces_CW_vs_frequency.py",
		"/C/Users/Theo/Desktop/SONIC paper data/Fig 5-6 - model validation/CW frequency/comp_spikemetrics_CW_vs_frequency.py",
		"/C/Users/Theo/Documents/PySONIC/scripts/run_estim.py",
		"/C/Users/Theo/Documents/PySONIC/scripts/run_astim.py",
		"/C/Users/Theo/Desktop/SONIC paper data/Fig 5-6 - model validation/CW amplitude/comp_spikemetrics_CW_vs_amplitude.py",
		"/C/Users/Theo/Documents/PySONIC/PySONIC/core/nbls.py",
		"/C/Users/Theo/Documents/PySONIC/PySONIC/constants.py",
		"/C/Users/Theo/Documents/PySONIC/scripts/plot_effective_variables.py",
		"/C/Users/Theo/Desktop/SONIC paper data/Fig 5-6 - model validation/CW regimes/comp_spikes_CW_vs_regimes.py",
		"/C/Users/Theo/Desktop/SONIC paper data/Fig 5-6 - model validation/CW regimes/run_CW_vs_regimes.py",
		"/C/Users/Theo/Desktop/SONIC paper data/Fig 5-6 - model validation/CW regimes/comp_traces_CW_vs_regimes.py",
		"/C/Users/Theo/Desktop/SONIC paper data/Fig 5-6 - model validation/CW amplitude/comp_traces_CW_vs_amplitude.py",
		"/C/Users/Theo/Desktop/SONIC paper data/Fig 5-6 - model validation/CW amplitude/run_CW_vs_amplitude.py",
		"/C/Users/Theo/Documents/PySONIC/scripts/run_lookups.py",
		"/C/Users/Theo/Documents/PySONIC/.gitignore",
		"/C/Users/Theo/Desktop/Intramembrane Cavitation Detection/experiments 04.18/calibration_utils.py",
		"/C/Users/Theo/Desktop/Intramembrane Cavitation Detection/model predictions/utils.py",
		"/C/Users/Theo/Desktop/Intramembrane Cavitation Detection/experiments 04.18/utils.py",
		"/C/Users/Theo/Desktop/Paper data/Fig 2 - optimization pipeline/plot_pipeline_figure.py",
		"/C/Users/Theo/Desktop/Paper data/Fig 2 - optimization pipeline/HH_equations.tex",
		"/C/Users/Theo/Documents/PySONIC/scripts/plot_gating_kinetics.py",
		"/C/Users/Theo/Documents/PySONIC/PySONIC/neurons/TC.mod",
		"/C/Users/Theo/Documents/PySONIC/scripts/records.csv",
		"/C/Users/Theo/Documents/PySONIC/PySONIC/plt/batch.py",
		"/C/Users/Theo/Documents/PySONIC/PySONIC/neurons/leech.py",
		"/C/Users/Theo/Documents/PySONIC/scripts/plot.py",
		"/C/Users/Theo/Documents/PySONIC/PySONIC/neurons/cortical.py",
		"/C/Users/Theo/Documents/PySONIC/PySONIC/neurons/thalamic.py",
		"/C/Users/Theo/Documents/PySONIC/PySONIC/plt/pltutils.py",
		"/C/Users/Theo/Desktop/Paper data/Fig 7 - behavior maps/behavior_maps.py",
		"/C/Users/Theo/Documents/PySONIC/scripts/plot_activation_map.py",
		"/C/Users/Theo/Desktop/Paper data/Fig 7 - behavior maps/plot_activation_map.py",
		"/C/Users/Theo/Documents/PySONIC/PySONIC/core/pneuron.py"
	],
	"find":
	{
		"height": 27.0
	},
	"find_in_files":
	{
		"height": 340.0,
		"where_history":
		[
			"",
			"C:\\Users\\Theo\\Desktop\\Paper data,*.py",
			""
		]
	},
	"find_state":
	{
		"case_sensitive": true,
		"find_history":
		[
			"std::cout",
			"stringstream",
			"filecode",
			"Algebraic",
			"ALGEBRAIC",
			"wind",
			"gcc",
			"g++",
			"underflow",
			"vec",
			"locator",
			"interp1d",
			"Cmavg",
			"'fig7a'",
			"CW_Athrs",
			"index_col",
			"extractCompTimes",
			"getSims",
			"getSpikingMetrics",
			"sipkeamp",
			"plotSpikingMetrics",
			"full_paths",
			"sonic_paths",
			"CW_sonic_fpaths",
			"CW_full_fpaths",
			"plotSpikingMetrics",
			"getSpikingMetrics",
			"computeSpikeMetrics",
			"createSimQueue",
			"xlslog",
			"effective",
			"classic",
			"amps",
			"effective",
			"classic",
			"computeSpikeMetrics",
			"add_patch",
			"bbox_to_",
			"subplots_ad",
			"Qm",
			"np.int",
			"xlslog",
			"computeAStimLookups",
			"from PySONIC.plt",
			"('PySONIC')",
			"from PySONIC.plt",
			"timeunits",
			"cm2inch",
			"neuron",
			"plotRawTrace",
			"logging",
			"defaults",
			"onClick",
			"defaults",
			"FRlims",
			"tmax",
			"neuron",
			"cm2",
			"colorscale",
			"yscale",
			"FR_bounds",
			"A_scale",
			"FR_scale",
			"ybounds",
			"si_format",
			"toffset",
			"getActivationMap",
			"Vm",
			"plotRawTrace",
			"getLookups2D",
			"getNeuronLookupsFile",
			"ctivation",
			"getActivationMap",
			"on_click",
			"plotActivationMap",
			"matplotlib",
			"cm",
			"computeMeshEdges",
			"getStimTiming",
			"getPatchesLoc",
			"patch",
			"computeMeshEdges",
			"SaveFigDialog",
			"fig_ext",
			"SaveFigDialog",
			"directory",
			"name ",
			"logger",
			"npatches",
			"Rec",
			"title",
			"ESTIM_CW_title",
			"getP",
			"inset",
			"Rectangle",
			"getNeuronsDict",
			"BilayerSonophore",
			"Rectangle",
			"InteractiveLegend",
			"bbox_to_anchor",
			"ngas",
			"nQ",
			"200",
			"bls.simulate",
			"npc",
			"filecode",
			"pkl_filename",
			"pkl_root",
			"nbls",
			"pickle.load",
			"NeuronalBilayerSonophore",
			"DownSample",
			"nblscore",
			"getLookups2D",
			"getNeuronLookupsFile",
			"downsample",
			"extractCompTimes",
			"computeMeshEdges",
			"LennardJones",
			"rescale",
			"find_nearest",
			"DownSample",
			"xlslog",
			"filterwarnings",
			"self",
			"checkBatchLog",
			"CheckBatchLog",
			"filename"
		],
		"highlight": true,
		"in_selection": false,
		"preserve_case": false,
		"regex": false,
		"replace_history":
		[
			"os",
			"sname",
			"Arithmetic",
			"ARITHMETIC",
			"arr",
			"prefix",
			"spikeamp",
			"full_fpaths",
			"sonic_fpaths",
			"sonic_paths",
			"full_paths",
			"sonic",
			"full",
			"xvar",
			"sonic",
			"full",
			"Qthr",
			"FRscale",
			"Ascale",
			"FRbounds",
			"Ascale",
			"FRscale",
			"Vbounds",
			"getStimPulses",
			"pulse",
			"gas.size",
			"charges.size",
			"downsample",
			"bls",
			"filepath",
			"1.",
			"None",
			"2",
			"1",
			"Qref",
			"nbls",
			"NeuronalBilayerSonophore",
			"queue_out",
			"queue_in",
			"queue",
			"Adrive",
			"self",
			"self.neuron",
			"fullDerivatives",
			"ode",
			"Arange",
			"Astim",
			"outpath",
			"derivatives",
			"PointNeuron",
			"Aref",
			"Qref",
			"Aref",
			"aref",
			"fref",
			"dref",
			"='sonic'",
			"PySONIC",
			"getLogger('PySONIC')",
			"from PySONIC import",
			"from PySONIC."
		],
		"reverse": false,
		"show_context": true,
		"use_buffer2": true,
		"whole_word": false,
		"wrap": true
	},
	"groups":
	[
		{
			"selected": 0,
			"sheets":
			[
				{
					"buffer": 0,
					"file": "work/week6/series/homework2/src/dumper.hh",
					"semi_transient": false,
					"settings":
					{
						"buffer_size": 599,
						"regions":
						{
						},
						"selection":
						[
							[
								417,
								417
							]
						],
						"settings":
						{
							"SL.125.region_keys":
							[
							],
							"SL.13.region_keys":
							[
							],
							"SL.14.region_keys":
							[
							],
							"SL.15.region_keys":
							[
							],
							"c_time":
							[
								128,
								3,
								99,
								100,
								97,
								116,
								101,
								116,
								105,
								109,
								101,
								10,
								100,
								97,
								116,
								101,
								116,
								105,
								109,
								101,
								10,
								113,
								0,
								67,
								10,
								7,
								226,
								10,
								23,
								14,
								44,
								33,
								6,
								179,
								99,
								113,
								1,
								133,
								113,
								2,
								82,
								113,
								3,
								46
							],
							"syntax": "Packages/C++/C++.sublime-syntax",
							"tab_size": 4,
							"translate_tabs_to_spaces": true
						},
						"translation.x": 0.0,
						"translation.y": 0.0,
						"zoom_level": 1.0
					},
					"stack_index": 3,
					"type": "text"
				},
				{
					"buffer": 1,
					"file": "work/week6/series/homework2/src/print.hh",
					"semi_transient": false,
					"settings":
					{
						"buffer_size": 439,
						"regions":
						{
						},
						"selection":
						[
							[
								431,
								431
							]
						],
						"settings":
						{
							"SL.14.region_keys":
							[
							],
							"SL.21.region_keys":
							[
							],
							"c_time":
							[
								128,
								3,
								99,
								100,
								97,
								116,
								101,
								116,
								105,
								109,
								101,
								10,
								100,
								97,
								116,
								101,
								116,
								105,
								109,
								101,
								10,
								113,
								0,
								67,
								10,
								7,
								226,
								10,
								23,
								19,
								41,
								4,
								15,
								2,
								55,
								113,
								1,
								133,
								113,
								2,
								82,
								113,
								3,
								46
							],
							"syntax": "Packages/C++/C++.sublime-syntax",
							"translate_tabs_to_spaces": true
						},
						"translation.x": 0.0,
						"translation.y": 0.0,
						"zoom_level": 1.0
					},
					"stack_index": 4,
					"type": "text"
				},
				{
					"buffer": 2,
					"file": "work/week6/series/homework2/src/write.hh",
					"semi_transient": false,
					"settings":
					{
						"buffer_size": 430,
						"regions":
						{
						},
						"selection":
						[
							[
								423,
								423
							]
						],
						"settings":
						{
							"SL.15.region_keys":
							[
							],
							"SL.16.region_keys":
							[
							],
							"SL.98.region_keys":
							[
							],
							"c_time":
							[
								128,
								3,
								99,
								100,
								97,
								116,
								101,
								116,
								105,
								109,
								101,
								10,
								100,
								97,
								116,
								101,
								116,
								105,
								109,
								101,
								10,
								113,
								0,
								67,
								10,
								7,
								226,
								10,
								23,
								17,
								29,
								50,
								9,
								86,
								127,
								113,
								1,
								133,
								113,
								2,
								82,
								113,
								3,
								46
							],
							"syntax": "Packages/C++/C++.sublime-syntax",
							"tab_size": 4,
							"translate_tabs_to_spaces": true
						},
						"translation.x": 0.0,
						"translation.y": 0.0,
						"zoom_level": 1.0
					},
					"stack_index": 5,
					"type": "text"
				}
			]
		},
		{
			"selected": 0,
			"sheets":
			[
				{
					"buffer": 3,
					"file": "work/week6/series/homework2/src/main.cc",
					"semi_transient": false,
					"settings":
					{
						"buffer_size": 1837,
						"regions":
						{
						},
						"selection":
						[
							[
								1394,
								1394
							]
						],
						"settings":
						{
							"SL.16.region_keys":
							[
								"SL.cpplint.Gutter.|region.redish markup.error.sublime_linter|dot",
								"SL.cpplint.Highlights.|d2aafa24c9b25b266cb8209f326557df9507537bea4b4bf87ca183217825ea7e|region.redish markup.error.sublime_linter|32",
								"SL.cpplint.Highlights.|ec21c0e02fe8597d0f8567e417d172ed42f65246067562056d8f3fcdd34a39bb|region.redish markup.error.sublime_linter|32",
								"sublime_linter.protected_regions",
								"SL.cpplint.Highlights.|7e0c5a5f856ad1fe7bb4afd2df474d1c99640af1be1d7c517364a505d61feed7|region.redish markup.error.sublime_linter|32"
							],
							"SL.28.region_keys":
							[
								"sublime_linter.protected_regions",
								"SL.cpplint.Gutter.|region.redish markup.error.sublime_linter|dot",
								"SL.cpplint.Highlights.|7ed975986a500fcc10cf2785e7e2e11287dbb2a361841fd2e551c89badc0ede8|region.redish markup.error.sublime_linter|32",
								"SL.cpplint.Highlights.|821e09e662371e08a26a3c059190c54a76ce0e93b143845eda4ea658928be23e|region.redish markup.error.sublime_linter|32",
								"SL.cpplint.Highlights.|6e1cee5def72136cd70e77d779ae436618420454b6675950247bc1477e993a9b|region.redish markup.error.sublime_linter|32"
							],
							"c_time":
							[
								128,
								3,
								99,
								100,
								97,
								116,
								101,
								116,
								105,
								109,
								101,
								10,
								100,
								97,
								116,
								101,
								116,
								105,
								109,
								101,
								10,
								113,
								0,
								67,
								10,
								7,
								226,
								10,
								23,
								14,
								16,
								33,
								10,
								187,
								232,
								113,
								1,
								133,
								113,
								2,
								82,
								113,
								3,
								46
							],
							"syntax": "Packages/C++/C++.sublime-syntax",
							"tab_size": 4,
							"translate_tabs_to_spaces": true
						},
						"translation.x": 0.0,
						"translation.y": 432.0,
						"zoom_level": 1.0
					},
					"stack_index": 0,
					"type": "text"
				},
				{
					"buffer": 4,
					"file": "work/week6/series/homework2/src/print.cc",
					"semi_transient": false,
					"settings":
					{
						"buffer_size": 876,
						"regions":
						{
						},
						"selection":
						[
							[
								342,
								342
							]
						],
						"settings":
						{
							"SL.141.region_keys":
							[
								"SL.cpplint.Gutter.|region.redish markup.error.sublime_linter|dot",
								"SL.cpplint.Highlights.|aa76f46cf2505e440bd2f057fc7364cbf3efa94a425dae5c35d9065eb6b56acf|region.redish markup.error.sublime_linter|32",
								"SL.cpplint.Highlights.|9023c2bd2ea1a71a954de7d9fda3ba93dcb90cbd471dd258509eaf1ed8f75da3|region.redish markup.error.sublime_linter|32",
								"SL.cpplint.Highlights.|644eea71d147386b45d006a632aebe1e94d9cc150e264a155315f3f63fe6a48a|region.redish markup.error.sublime_linter|32",
								"sublime_linter.protected_regions"
							],
							"SL.18.region_keys":
							[
								"SL.cpplint.Highlights.|09a897ab1b3311bb62344651a66e37e53cb42d145069405d29f84bd11094e8c9|region.redish markup.error.sublime_linter|32",
								"SL.cpplint.Gutter.|region.redish markup.error.sublime_linter|dot",
								"sublime_linter.protected_regions",
								"SL.cpplint.Highlights.|644eea71d147386b45d006a632aebe1e94d9cc150e264a155315f3f63fe6a48a|region.redish markup.error.sublime_linter|32"
							],
							"SL.19.region_keys":
							[
								"sublime_linter.protected_regions",
								"SL.cpplint.Highlights.|09a897ab1b3311bb62344651a66e37e53cb42d145069405d29f84bd11094e8c9|region.redish markup.error.sublime_linter|32",
								"SL.cpplint.Highlights.|644eea71d147386b45d006a632aebe1e94d9cc150e264a155315f3f63fe6a48a|region.redish markup.error.sublime_linter|32",
								"SL.cpplint.Gutter.|region.redish markup.error.sublime_linter|dot"
							],
							"c_time":
							[
								128,
								3,
								99,
								100,
								97,
								116,
								101,
								116,
								105,
								109,
								101,
								10,
								100,
								97,
								116,
								101,
								116,
								105,
								109,
								101,
								10,
								113,
								0,
								67,
								10,
								7,
								226,
								10,
								23,
								19,
								41,
								4,
								15,
								2,
								55,
								113,
								1,
								133,
								113,
								2,
								82,
								113,
								3,
								46
							],
							"syntax": "Packages/C++/C++.sublime-syntax",
							"translate_tabs_to_spaces": true
						},
						"translation.x": 0.0,
						"translation.y": 0.0,
						"zoom_level": 1.0
					},
					"stack_index": 1,
					"type": "text"
				},
				{
					"buffer": 5,
					"file": "lectures/code_snippets/fstream.cpp",
					"semi_transient": true,
					"settings":
					{
						"buffer_size": 291,
						"regions":
						{
						},
						"selection":
						[
							[
								35,
								35
							]
						],
						"settings":
						{
							"SL.34.region_keys":
							[
								"SL.cpplint.Gutter.|region.redish markup.error.sublime_linter|dot",
								"sublime_linter.protected_regions",
								"SL.cpplint.Highlights.|2c6781ea7d614afcb76475fb3eca400487476d685987383034d4d7f2d9d5e546|region.redish markup.error.sublime_linter|32"
							],
							"c_time":
							[
								128,
								3,
								99,
								100,
								97,
								116,
								101,
								116,
								105,
								109,
								101,
								10,
								100,
								97,
								116,
								101,
								116,
								105,
								109,
								101,
								10,
								113,
								0,
								67,
								10,
								7,
								226,
								10,
								2,
								12,
								28,
								4,
								11,
								83,
								211,
								113,
								1,
								133,
								113,
								2,
								82,
								113,
								3,
								46
							],
							"syntax": "Packages/C++/C++.sublime-syntax"
						},
						"translation.x": 0.0,
						"translation.y": 0.0,
						"zoom_level": 1.0
					},
					"stack_index": 2,
					"type": "text"
				},
				{
					"buffer": 6,
					"file": "work/week6/series/homework2/src/dumper.cc",
					"semi_transient": false,
					"settings":
					{
						"buffer_size": 119,
						"regions":
						{
						},
						"selection":
						[
							[
								118,
								118
							]
						],
						"settings":
						{
							"SL.18.region_keys":
							[
							],
							"SL.22.region_keys":
							[
								"sublime_linter.protected_regions"
							],
							"c_time":
							[
								128,
								3,
								99,
								100,
								97,
								116,
								101,
								116,
								105,
								109,
								101,
								10,
								100,
								97,
								116,
								101,
								116,
								105,
								109,
								101,
								10,
								113,
								0,
								67,
								10,
								7,
								226,
								10,
								24,
								8,
								49,
								33,
								8,
								6,
								145,
								113,
								1,
								133,
								113,
								2,
								82,
								113,
								3,
								46
							],
							"syntax": "Packages/C++/C++.sublime-syntax",
							"tab_size": 4,
							"translate_tabs_to_spaces": true
						},
						"translation.x": 0.0,
						"translation.y": 0.0,
						"zoom_level": 1.0
					},
					"stack_index": 6,
					"type": "text"
				},
				{
					"buffer": 7,
					"file": "work/week6/series/homework2/src/write.cc",
					"semi_transient": false,
					"settings":
					{
						"buffer_size": 1064,
						"regions":
						{
						},
						"selection":
						[
							[
								276,
								276
							]
						],
						"settings":
						{
							"SL.122.region_keys":
							[
								"SL.cpplint.Gutter.|region.redish markup.error.sublime_linter|dot",
								"SL.cpplint.Highlights.|ea1452cc84d26a63488d7e361cbc50ccb5dc155b63299c444d53ba28e801f2b7|region.redish markup.error.sublime_linter|32",
								"sublime_linter.protected_regions"
							],
							"SL.17.region_keys":
							[
								"sublime_linter.protected_regions",
								"SL.cpplint.Gutter.|region.redish markup.error.sublime_linter|dot",
								"SL.cpplint.Highlights.|ea1452cc84d26a63488d7e361cbc50ccb5dc155b63299c444d53ba28e801f2b7|region.redish markup.error.sublime_linter|32"
							],
							"c_time":
							[
								128,
								3,
								99,
								100,
								97,
								116,
								101,
								116,
								105,
								109,
								101,
								10,
								100,
								97,
								116,
								101,
								116,
								105,
								109,
								101,
								10,
								113,
								0,
								67,
								10,
								7,
								226,
								10,
								23,
								17,
								32,
								48,
								14,
								192,
								127,
								113,
								1,
								133,
								113,
								2,
								82,
								113,
								3,
								46
							],
							"syntax": "Packages/C++/C++.sublime-syntax",
							"tab_size": 4,
							"translate_tabs_to_spaces": true
						},
						"translation.x": 0.0,
						"translation.y": 0.0,
						"zoom_level": 1.0
					},
					"stack_index": 7,
					"type": "text"
				}
			]
		}
	],
	"incremental_find":
	{
		"height": 27.0
	},
	"input":
	{
		"height": 106.0
	},
	"layout":
	{
		"cells":
		[
			[
				0,
				0,
				1,
				1
			],
			[
				1,
				0,
				2,
				1
			]
		],
		"cols":
		[
			0.0,
			0.5,
			1.0
		],
		"rows":
		[
			0.0,
			1.0
		]
	},
	"menu_visible": true,
	"output.SublimeLinter":
	{
		"height": 160.0
	},
	"output.exec":
	{
		"height": 151.0
	},
	"output.find_results":
	{
		"height": 0.0
	},
	"output.git":
	{
		"height": 171.0
	},
	"output.mdpopups":
	{
		"height": 0.0
	},
	"pinned_build_system": "Packages/User/py36.sublime-build",
	"project": "SP4E18.sublime-project",
	"replace":
	{
		"height": 50.0
	},
	"save_all_on_build": true,
	"select_file":
	{
		"height": 0.0,
		"last_filter": "",
		"selected_items":
		[
			[
				"",
				"paper figures\\fig6.py"
			],
			[
				"git stats",
				"scripts\\plot_gating_kinetics.py"
			]
		],
		"width": 0.0
	},
	"select_project":
	{
		"height": 0.0,
		"last_filter": "",
		"selected_items":
		[
		],
		"width": 0.0
	},
	"select_symbol":
	{
		"height": 357.0,
		"last_filter": "",
		"selected_items":
		[
		],
		"width": 374.0
	},
	"selected_group": 1,
	"settings":
	{
	},
	"show_minimap": false,
	"show_open_files": false,
	"show_tabs": true,
	"side_bar_visible": true,
	"side_bar_width": 234.0,
	"status_bar_visible": true,
	"template_settings":
	{
	}
}