getSlicedPixelCoordinates.m
fb70e1933436feat_muscle_subdivisions

getSlicedPixelCoordinates.m
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			function output = getSlicedPixelCoordinates(obj)
			% Extract the pixels indices in space (x,y,z)
			for row = 1:size(obj.sliced,1)
			for column = 1:size(obj.sliced,2)
			x = min(size(obj.volume, 1), max(1, round(obj.slicedX(row, column))));
			y = min(size(obj.volume, 2), max(1, round(obj.slicedY(row, column))));
			z = min(size(obj.volume, 3), max(1, round(obj.slicedZ(row, column))));
			% Retrieve the pixels coordinates in space from indices (x,y,z)
			slicePixelCoordinates{row, column} = [obj.getPointCoordinates([x, y, z])];
			end
			end
			slicePixelCoordinates(not(obj.pointsInVolume)) = {nan};
			% slicePixelcoordinates is misoriented, the reason of this error is unknown.
			slicePixelCoordinates = rot90(flipud(slicePixelCoordinates), -1);
			% TODOD: Fix the need for slicePixelCoordinates to undergo rot90 and flipud.
			output = slicePixelCoordinates;
			end