Diffusion ShoulderDB_ImportSegmentMeasureAnalyze (glenoidCap) Browse

nitfparse20.m
653c5e9c2788glenoidCap

nitfparse20.m
View Options

			function nitf_meta = nitfparse20(fid)
			%NITFPARSE20 Parse the fields in an NITF2.0 file.

			% Copyright 2007-2008 The MathWorks, Inc.

			nitf_meta = struct([]);
			fields = {'FHDR', 'FileTypeAndVersion', 9
			'CLEVEL', 'ComplianceLevel', 2
			'STYPE', 'SystemType', 4
			'OSTAID', 'OriginatingStationID', 10
			'FDT', 'FileDateAndTime', 14
			'FTITLE', 'FileTitle', 80
			'FSCLAS', 'FileSecurityClassification', 1
			'FSCODE', 'FileCodewords', 40
			'FSCTLH', 'FileControlAndHandling', 40
			'FSREL', 'FileReleasingInstructions', 40
			'FSCAUT', 'FileClassificationAuthority', 20
			'FSCTLN', 'FileSecurityControlNumber', 20
			'FSDWNG', 'FileSecurityDowngrade', 6};
			nitf_meta = nitfReadMeta(nitf_meta, fields, fid);

			%FSDWNG is NITF_META(13) and the last item extracted in the loop above. Depending
			%on its value there will be an FSDEVT or File Downgrading Event field.
			%If FSDWNG is "999998", add the FSDEVT field to the meta data struct
			%and insert values.
			fsdwng = nitf_meta(end).value;
			nitf_meta = checkFDSWNG(fid, nitf_meta, fsdwng);

			%Pull in the next several required fields
			fields = {'FSCOP', 'MessageCopyNumber', 5
			'FSCPYS', 'MessageNumberOfCopies', 5
			'ENCRYP', 'Encryption', 1
			'ONAME', 'OriginatorsName', 27
			'OPHONE', 'OriginatorsPhoneNumber', 18
			'FL', 'FileLength', 12
			'HL', 'NITFFileHeaderLength', 6
			'NUMI', 'NumberOfImages', 3};
			nitf_meta = nitfReadMeta(nitf_meta, fields, fid);

			numi = sscanf(nitf_meta(end).value, '%f');
			[nitf_meta, imLengths] = processtopimagesubheadermeta(numi, nitf_meta, fid);

			%Next field gives the number of symbol (graphic) segments.
			fields = {'NUMS', 'NumberOfSymbols', 3};
			nitf_meta = nitfReadMeta(nitf_meta, fields, fid);

			nums = sscanf(nitf_meta(end).value, '%f');
			[nitf_meta, grLengths] = processtopgraphicsubheadermeta(nums, nitf_meta, fid);

			%Next group is Labels
			fields = {'NUML', 'NumberOfLabels', 3};
			nitf_meta = nitfReadMeta(nitf_meta, fields, fid);

			numl = sscanf(nitf_meta(end).value, '%f');
			[nitf_meta, laLengths] = processtoplabelsubheadermeta(numl, nitf_meta, fid);

			%Next group is text files
			fields = {'NUMT', 'NumberOfTextFiles', 3};
			nitf_meta = nitfReadMeta(nitf_meta, fields, fid);

			numt = sscanf(nitf_meta(end).value, '%f');
			[nitf_meta, teLengths] = processtoptextsubheadermeta(numt, nitf_meta, fid);

			%Next group is Data Extension Segments
			fields = {'NUMDES', 'NumberOfDataExtensionSegments', 3};
			nitf_meta = nitfReadMeta(nitf_meta, fields, fid);

			numdes = sscanf(nitf_meta(end).value, '%f');
			[nitf_meta, deLengths] = processtopdesubheadermeta(numdes, nitf_meta, fid);

			%Next group is Reserved Extension Segments
			fields = {'NUMRES', 'NumberOfReservedDataExtensionSegments', 3};
			nitf_meta = nitfReadMeta(nitf_meta, fields, fid);

			numres = sscanf(nitf_meta(end).value, '%f');
			[nitf_meta, reLengths, reHeaderLengths] = processtopresubheadermeta(numres, nitf_meta, fid);

			%Next group is User Define Header Segments which contain tagged record extensions.
			%Get the Header Data Length
			fields = {'UDHDL', 'UserDefinedHeaderDataLength', 5};
			nitf_meta = nitfReadMeta(nitf_meta, fields, fid);

			UDHDL = sscanf(nitf_meta(end).value, '%f');
			nitf_meta = processtopudsubheadermeta(UDHDL, nitf_meta, fid);

			%Next group is Extended Header Segments which contain tagged record extensions.
			%Get the Header Data Length
			fields = {'XHDL', 'ExtendedHeaderDataLength', 5};
			nitf_meta = nitfReadMeta(nitf_meta, fields, fid);

			XHDL = sscanf(nitf_meta(end).value, '%f');
			if XHDL > 0

			% Handle any Extended Header Data
			% Note: for our initial release we do not provide explicit support
			% for tagged record extensions. All of the contents of the Extended
			% Header Data (XHD) field are extracted into a single element.
			fields = {'XHDL', 'ExtendedHeaderData', XHDL};
			nitf_meta = nitfReadMeta(nitf_meta, fields, fid);

			end

			%Call the image segment metadata parser for each image subheader

			%First, we want the nitf_meta struct to have a ImageSubHeader field. This
			%will have the total offset of the subheader(s), and the value will be
			%a struct which contains a list of image subheaders. Each subheader in
			%the list is displayed table form when the user clicks on the struct
			%value.

			%Build the structure of ImageSubHeaders
			if numi > 0
			nitf_meta = processImageSubheaders(nitf_meta,numi,fid, imLengths);
			end

			%Build the structure of SymbolSubHeaders
			if nums > 0
			nitf_meta = processGraphicSubheaders(nitf_meta,nums ,fid, grLengths);
			end

			%Build the structure of LabelSubHeaders
			if numl > 0
			nitf_meta = processLabelSubheaders(nitf_meta,numl ,fid, laLengths);
			end

			%Build the structure of TextSubHeaders
			if numt > 0
			nitf_meta = processTextSubheaders(nitf_meta,numt ,fid, teLengths);
			end

			%Build the structure of DataExtensionSubHeaders
			if numdes > 0
			nitf_meta = processDESubheaders(nitf_meta,numdes ,fid, deLengths);
			end

			%Build the structure of ReservedExtensionSubHeaders
			if numres > 0
			nitf_meta = processRESubheaders(nitf_meta,numres ,fid, reLengths, reHeaderLengths);
			end



			function nitf_meta = checkFDSWNG(fid, nitf_meta, fsdwng)
			%TODO Factor this and other functions like it out!
			fsdwng = sscanf(fsdwng, '%f');
			if (isequal(fsdwng, 999998))
			fields = {'FSDEVT', 'FileDowngradingEvent', 40};
			nitf_meta = nitfReadMeta(nitf_meta, fields, fid);
			end



			function [nitf_meta, imLengths] = processtopimagesubheadermeta(numi, nitf_meta, fid)
			%Add the nth image subheader information to the nitf_meta struct
			%This struct contains the image subheader length and image length
			%for all the images in the file
			imLengths(1).value = '';

			if (numi > 0)

			% Preallocate the lengths structure.
			imLengths(numi).value = '';

			nitf_meta(end + 1).name = 'ImageAndSubHeaderLengths';
			nitf_meta(end).vname = 'ImageAndImageSubheaderLengths';

			fields = {'LISH%03d', 'LengthOfNthImageSubheader', 6
			'LI%010d', 'LengthOfNthImage', 10};

			for currentImage = 1:numi

			% Setup.
			nitf_metaISL(currentImage).name = sprintf('Image%03d', currentImage);
			nitf_metaISL(currentImage).vname = [nitf_metaISL(currentImage).name 'ImageAndSubheaderLengths'];

			% Parse the data.
			tempStruct = struct([]);
			tempStruct = nitfReadMetaMulti(tempStruct, fields, fid, currentImage);
			nitf_metaISL(currentImage).value = tempStruct;

			% Update lengths with the value read.
			imLengths(currentImage).value = tempStruct(2).value;

			end

			nitf_meta(end).value = nitf_metaISL;

			end



			function [nitf_meta, grLengths] = processtopgraphicsubheadermeta(nums,nitf_meta, fid)

			grLengths(1).value = '';

			if (nums > 0)

			% Preallocate the lengths structure.
			grLengths(nums).value = '';

			nitf_meta(end + 1).name = 'SymbolAndSubHeaderLengths';
			nitf_meta(end).vname = 'SymbolAndSymbolSubheaderLengths';

			fields = {'LSSH%03d', 'LengthOfNthGraphicSubheader', 4
			'LS%06d', 'LengthOfNthGraphic', 6};

			for currentGraphic = 1:nums

			% Setup.
			nitf_metaGSL(currentGraphic).name = sprintf('Graphic%03d', currentGraphic);
			nitf_metaGSL(currentGraphic).vname = [nitf_metaGSL(currentGraphic).name 'GraphicAndSubheaderLengths'];

			% Parse the data.
			tempStruct = struct([]);
			tempStruct = nitfReadMetaMulti(tempStruct, fields, fid, currentGraphic);
			nitf_metaGSL(currentGraphic).value = tempStruct;

			% Update lengths with the value read.
			grLengths(currentGraphic).value = tempStruct(2).value;

			end

			nitf_meta(end).value = nitf_metaGSL;

			end



			function [nitf_meta, laLengths] = processtoplabelsubheadermeta(numl, nitf_meta, fid)

			laLengths(1).value = '';

			if (numl > 0)

			% Preallocate the lengths structure.
			laLengths(numl).value = '';

			nitf_meta(end + 1).name = 'LabelAndSubHeaderLengths';
			nitf_meta(end).vname = 'LabelAndLabelSubheaderLengths';

			fields = {'LLSH%03d', 'LengthOfNthLabelSubheader', 4
			'LL%06d', 'LengthOfNthLabel', 3};

			for currentLabel = 1:numl

			% Setup.
			nitf_metaLSL(currentLabel).name = sprintf('Label%03d', currentLabel);
			nitf_metaLSL(currentLabel).vname = [nitf_metaLSL(currentLabel).name 'LabelAndSubheaderLengths'];

			% Parse the data.
			tempStruct = struct([]);
			tempStruct = nitfReadMetaMulti(tempStruct, fields, fid, currentLabel);
			nitf_metaLSL(currentLabel).value = tempStruct;

			% Update lengths with the value read.
			laLengths(currentLabel).value = tempStruct(2).value;

			end

			nitf_meta(end).value = nitf_metaLSL;

			end



			function [nitf_meta, teLengths] = processtoptextsubheadermeta(numt, nitf_meta, fid)

			teLengths(1).value = '';

			if (numt > 0)

			% Preallocate the lengths structure.
			teLengths(numt).value = '';

			nitf_meta(end + 1).name = 'TextAndSubHeaderLengths';
			nitf_meta(end).vname = 'TextAndTextSubheaderLengths';

			fields = {'LTSH%03d', 'LengthOfNthTextSubheader', 4
			'LT%03d', 'LengthOfNthText', 5};

			for currentText = 1:numt

			% Setup.
			nitf_metaLTL(currentText).name = sprintf('Text%03d', currentText);
			nitf_metaLTL(currentText).vname = [nitf_metaLTL(currentText).name 'TextAndSubheaderLengths'];

			% Parse the data.
			tempStruct = struct([]);
			tempStruct = nitfReadMetaMulti(tempStruct, fields, fid, currentText);
			nitf_metaLTL(currentText).value = tempStruct;

			% Update lengths with the value read.
			teLengths(currentText).value = tempStruct(2).value;

			end

			nitf_meta(end).value = nitf_metaLTL;

			end



			function [nitf_meta, deLengths] = processtopdesubheadermeta(numdes, nitf_meta, fid)

			deLengths(1).value = '';

			if (numdes > 0)

			% Preallocate the lengths structure.
			deLengths(numdes).value = '';

			nitf_meta(end + 1).name = 'DataExtensionsAndSubHeaderLengths';
			nitf_meta(end).vname = 'DataExtensionAndDataExtensionSubheaderLengths';

			fields = {'LDSH%03d', 'LengthOfNthDataExtensionSubheader', 4
			'LD%03d', 'LengthOfNthDataExtension', 9};

			for currentDES = 1:numdes

			% Setup.
			nitf_metaDES(currentDES).name = sprintf('DataExtension%03d', currentDES);
			nitf_metaDES(currentDES).vname = [nitf_metaDES(currentDES).name 'DataExtensionAndSubheaderLengths'];

			% Parse the data.
			tempStruct = struct([]);
			tempStruct = nitfReadMetaMulti(tempStruct, fields, fid, currentDES);
			nitf_metaDES(currentDES).value = tempStruct;

			% Update lengths with the value read.
			deLengths(currentDES).value = tempStruct(2).value;

			end

			nitf_meta(end).value = nitf_metaDES;

			end



			function [nitf_meta, reLengths, reHeaderLengths] = processtopresubheadermeta(numres, nitf_meta, fid)

			reLengths(1).value = '';
			reHeaderLengths(1).value = '';

			if (numres > 0)

			% Preallocate the lengths structure.
			reLengths(numres).value = '';
			reHeaderLengths(numres).value = '';

			nitf_meta(end + 1).name = 'ReservedExtensionsAndSubHeaderLengths';
			nitf_meta(end).vname = 'ReservedExtensionAndReservedExtensionSubheaderLengths';

			fields = {'LRSH%03d', 'LengthOfNthReservedExtensionSegmentSubheader', 4
			'LR%03d', 'LengthOfNthReservedExtensionSegmentData', 7};

			for currentRES = 1:numres

			% Setup.
			nitf_metaRES(currentRES).name = sprintf('ReservedExtension%03d', currentRES);
			nitf_metaRES(currentRES).vname = [nitf_metaRES(currentRES).name 'ReservedExtensionAndSubheaderLengths'];

			% Parse the data.
			tempStruct = struct([]);
			tempStruct = nitfReadMetaMulti(tempStruct, fields, fid, currentRES);
			nitf_metaRES(currentRES).value = tempStruct;

			% Update lengths with the value read.
			reHeaderLengths(currentRES).value = tempStruct(1).value;
			reLengths(currentRES).value = tempStruct(2).value;

			end

			nitf_meta(end).value = nitf_metaRES;

			end



			function nitf_meta = processtopudsubheadermeta(UDHDL, nitf_meta, fid)

			if (UDHDL > 0)

			fields = {'UDHOFL', 'UserDefinedHeaderOverflow', 3
			'UDHDL', 'UserDefinedHeaderData', UDHDL - 3};
			nitf_meta = nitfReadMeta(nitf_meta, fields, fid);

			end



			function nitf_meta = processImageSubheaders(nitf_meta, numi, fid, imLengths)
			%Add the nth image subheader to the nitf_meta struct

			nitf_meta(end + 1).name = 'ImageSubHeaders';
			nitf_meta(end).vname = 'ImageSubheaderMetadata';

			%Preallocate memory for ISnitf_meta
			ISnitf_meta(numi).name = '';

			for imageNumber = 1:numi
			ISnitf_meta(imageNumber).name = sprintf('IS%03d', imageNumber);
			ISnitf_meta(imageNumber).vname = sprintf('ImageSubheader%03d', imageNumber);
			ISnitf_meta(imageNumber).value = parseimagesubheader20( fid, imLengths(imageNumber).value);
			end

			nitf_meta(end).value = ISnitf_meta;



			function nitf_meta = processGraphicSubheaders(nitf_meta, nums, fid, grLengths)
			%Add the nth symbol subheader to the nitf_meta struct

			nitf_meta(end + 1).name = 'SymbolSubHeaders';
			nitf_meta(end).vname = 'SymbolSubheaderMetadata';

			%Preallocate memory for ISnitf_meta
			IGnitf_meta(nums).name = '';

			for graphicNumber = 1:nums
			IGnitf_meta(graphicNumber).name = sprintf('IG%03d', graphicNumber);
			IGnitf_meta(graphicNumber).vname = sprintf('SymbolSubheader%03d', graphicNumber);
			IGnitf_meta(graphicNumber).value = parsegraphicsubheader20( fid, grLengths(graphicNumber).value);
			end

			nitf_meta(end).value = IGnitf_meta;



			function nitf_meta = processLabelSubheaders(nitf_meta, numl, fid, laLengths)
			%Add the nth text subheader to the nitf_meta struct

			nitf_meta(end + 1).name = 'LabelSubHeaders';
			nitf_meta(end).vname = 'LabelSubheaderMetadata';

			%Preallocate memory for ILnitf_meta
			ILnitf_meta(numl).value = '';

			for labelNumber = 1:numl
			ILnitf_meta(labelNumber).name = sprintf('IL%03d', labelNumber);
			ILnitf_meta(labelNumber).vname = sprintf('LabelSubheader%03d', labelNumber);
			ILnitf_meta(labelNumber).value = parselabelsubheader20( fid, laLengths(labelNumber).value);
			end

			nitf_meta(end).value = ILnitf_meta;



			function nitf_meta = processTextSubheaders(nitf_meta, numt, fid, teLengths)
			%Add the nth text subheader to the nitf_meta struct

			nitf_meta(end + 1).name = 'TextSubHeaders';
			nitf_meta(end).vname = 'TextSubheaderMetadata';

			%Preallocate memory for ITnitf_meta
			ITnitf_meta(numt).value = '';

			for textNumber = 1:numt
			ITnitf_meta(textNumber).name = sprintf('IT%03d', textNumber);
			ITnitf_meta(textNumber).vname = sprintf('TextSubheader%03d', textNumber);
			ITnitf_meta(textNumber).value = parsetextsubheader20( fid, teLengths(textNumber).value);
			end

			nitf_meta(end).value = ITnitf_meta;



			function nitf_meta = processDESubheaders(nitf_meta, numdes, fid, deLengths)
			%Add the nth data extension subheader to the nitf_meta struct

			nitf_meta(end + 1).name = 'DataExtensionSubHeaders';
			nitf_meta(end).vname = 'DataExtensionSubheaderMetadata';

			%Preallocate memory for ITnitf_meta
			DEnitf_meta(numdes).value = '';

			for deNumber = 1:numdes
			DEnitf_meta(deNumber).name = sprintf('DE%03d', deNumber);
			DEnitf_meta(deNumber).vname = sprintf('DataExtensionSubheader%03d', deNumber);
			DEnitf_meta(deNumber).value = parseDEsubheader20( fid, deLengths(deNumber).value);
			end

			nitf_meta(end).value = DEnitf_meta;



			function nitf_meta = processRESubheaders(nitf_meta, numres, fid, reLengths, reHeaderLengths)
			%Add the nth reserved extension header to the nitf_meta struct

			nitf_meta(end + 1).name = 'ReservedExtensionSubHeaders';
			nitf_meta(end).vname = 'ReservedExtensionSubheaderMetadata';

			%Preallocate memory for ITnitf_meta..How to do this?
			REnitf_meta(numres).value = '';

			for reNumber = 1:numres
			REnitf_meta(reNumber).name = sprintf('RE%03d', reNumber);
			REnitf_meta(reNumber).vname = sprintf('ReserveExtensionSubheader%03d', reNumber);
			REnitf_meta(reNumber).value = parseREsubheader20( fid, reLengths(reNumber).value, reHeaderLengths(reNumber).value);
			end

			nitf_meta(end).value = REnitf_meta;

R8218/CT/private/nitfparse20.m653c5e9c2788glenoidCap

nitfparse20.mView Options

R8218/CT/private/nitfparse20.m
653c5e9c2788glenoidCap

nitfparse20.m
View Options