classdef (Abstract) Shoulder < handle
% Contains all the shoulder parts (bones) and their measurements.
%
% Can be used to plot an overview of the case.

  properties
    side = ""; % R or L
    scapula
    humerus
    rotatorCuff
    CTscan = "";
    comment = "";
    SCase
  end

  methods
    function obj = Shoulder(SCase)
      obj.SCase   = SCase;
      obj.humerus = Humerus(obj);
      obj.rotatorCuff = RotatorCuff(obj);
    end

    function loadData(obj)
      obj.scapula.load();
      obj.scapula.glenoid.load();
      obj.humerus.load();
    end

    function measureMorphology(obj)
      obj.scapula.coordSysSet();
      obj.scapula.glenoid.morphology();
      obj.humerus.subluxation();
      obj.scapula.acromion.morphology();
    end

    function measureDensity(obj)
      obj.scapula.genoid.calcDensity();
    end

    function measureMuscles(obj)
      obj.scapula.rotatorCuff.sliceAndSegment();
      obj.scapula.rotatorCuff.measure("rotatorCuffMatthieu", "autoMatthieu");
    end
  end

end