Diffusion ShoulderDB_ImportSegmentMeasureAnalyze (master) History

History
master00ed43dc0d09c4e221aa553…

Sep 9 2021

doc: update tag reference
00ed43dc0d09
·Matthieu Boubat (lbovenus) on Sep 9 2021, 19:59.
doc: clarify docstring and comment
9a2b6e69de1a
·Matthieu Boubat (lbovenus) on Sep 9 2021, 19:57.
doc: add Humerus variables description
30232e9b745b
·Matthieu Boubat (lbovenus) on Sep 9 2021, 19:55.
doc: complete RotatorCuff variables description
13e6f19b26c0
·Matthieu Boubat (lbovenus) on Sep 9 2021, 19:13.
doc: explain flags meaning
a3a8a698cd8b
·Matthieu Boubat (lbovenus) on Sep 9 2021, 18:35.
doc: add Acromion and RotatorCuff variables description
635d94c798f5
·Matthieu Boubat (lbovenus) on Sep 9 2021, 18:31.
doc: add Scapula and Glenoid variables description
98c0da1cc0dc
·Matthieu Boubat (lbovenus) on Sep 9 2021, 15:42.

Sep 8 2021

doc: add Patient variables description
debfd98615fb
·Matthieu Boubat (lbovenus) on Sep 8 2021, 17:37.

Sep 7 2021

Merge branch 'patient_data_review' into 'master'
3c36ee29f9bf
·boubat on Sep 7 2021, 17:31.
refactor: read patient data from dicom instead of excel
c4bc71da9b28
·Matthieu Boubat (lbovenus) on Sep 7 2021, 17:26.
Merge branch 'measureSCase_review' into 'master'
5a906fe7379d
·boubat on Sep 7 2021, 16:40.
feat: add log sections
a14a301c6cd0
·Matthieu Boubat (lbovenus) on Sep 7 2021, 16:38.
refactor: remove special measurements
74549b84a237
·Matthieu Boubat (lbovenus) on Sep 7 2021, 16:25.
Merge branch 'imbalance_angle_orientation' into 'master'
42f4a3b4a9ce
·boubat on Sep 7 2021, 14:05.
fix: correct used vector
8ca3cc274332
·Matthieu Boubat (lbovenus) on Sep 7 2021, 13:33.
feat: add imbalance angle orientation measurement
5032165219c8
·Matthieu Boubat (lbovenus) on Sep 7 2021, 12:58.

Sep 6 2021

Merge branch 'imbalance_angle_extension' into 'master'
99cfeb7a9775
·boubat on Sep 6 2021, 18:34.
feat: implement measurements of imbalance angles
091e229afe92
·Matthieu Boubat (lbovenus) on Sep 6 2021, 18:32.
fix: fix typo
e5756873d4cc
·Matthieu Boubat (lbovenus) on Sep 6 2021, 18:22.
Merge branch 'export_variables_review' into 'master'
25c64e6109f8
·boubat on Sep 6 2021, 17:43.
refactor: change variables default value
a4877742fd5f
·Matthieu Boubat (lbovenus) on Sep 6 2021, 17:05.
refactor: rename variable and remove vertical mean
dbfff36eff7e
·Matthieu Boubat (lbovenus) on Sep 6 2021, 17:03.
refactor: update use of data export with new parameters
c23fc3b3bfa9
·Matthieu Boubat (lbovenus) on Sep 6 2021, 12:36.
refactor: change property attribute
6a9d8915e6b2
·Matthieu Boubat (lbovenus) on Sep 6 2021, 12:36.
feat: add export parameters
7f60ca3de6f3
·Matthieu Boubat (lbovenus) on Sep 6 2021, 12:35.
refactor: make variable name explicit
a66b66c4c126
·Matthieu Boubat (lbovenus) on Sep 6 2021, 12:32.

Sep 2 2021

fix: fix muscle subdivision with 1 fibre
86e0cd6553ef
·Matthieu Boubat (lbovenus) on Sep 2 2021, 12:25.

Sep 1 2021

fix: fix typo
ee54cdb29dac
·Matthieu Boubat (lbovenus) on Sep 1 2021, 18:15.

Aug 19 2021

refactor: update method to new landmarks
658834f1cb1b
·boubat on Aug 19 2021, 13:53.
refactor: update use of methods and landmarks
fc47198e3979
·Matthieu Boubat (lbovenus) on Aug 19 2021, 13:44.
refactor: update use of landmarks structure and remove side effect
9d372977a92d
·Matthieu Boubat (lbovenus) on Aug 19 2021, 13:41.
refactor: extract method
edd367ee469d
·Matthieu Boubat (lbovenus) on Aug 19 2021, 13:39.
refactor: update method to file structure
5b5f7b1580a7
·Matthieu Boubat (lbovenus) on Aug 19 2021, 13:03.
refactor: rename method
1d42250bf0a9
·Matthieu Boubat (lbovenus) on Aug 19 2021, 13:02.

Aug 18 2021

refactor: lock fibres control points
d628ee835049
·Matthieu Boubat (lbovenus) on Aug 18 2021, 17:16.
refactor: update checked filename
56e488a5c319
·Matthieu Boubat (lbovenus) on Aug 18 2021, 17:15.

Aug 16 2021

Merge branch 'humerus_landmarks' into 'master'
9eefa846dc31
·boubat on Aug 16 2021, 18:42.
refactor: update method with new landmarks structure
53971eef95f7
·boubat on Aug 16 2021, 18:32.
refactor: update methods with new landmarks structure
b18f5afcbf1d
·Matthieu Boubat (lbovenus) on Aug 16 2021, 18:30.
refactor: remove deprecated property
4751f7bd64d3
·Matthieu Boubat (lbovenus) on Aug 16 2021, 18:29.
feat: add words validation
91527c97eec4
·Matthieu Boubat (lbovenus) on Aug 16 2021, 18:29.
refactor: update and extract methods
0a0631878501
·Matthieu Boubat (lbovenus) on Aug 16 2021, 18:28.

Aug 13 2021

Merge branch 'muscle_divisions_homogenisation' into 'master'
a850000c9cd2
·tag: articular_fitting_sphere
·boubat on Aug 13 2021, 17:39.
feat: implement square grid muscles subdivision
7a91e9c70146
·Matthieu Boubat (lbovenus) on Aug 13 2021, 17:37.
Merge branch 'continuous_insertions' into 'master'
8298a5794395
·boubat on Aug 13 2021, 12:47.

Aug 12 2021

refactor: project insertions on insertions ring
56a055a27f37
·Matthieu Boubat (lbovenus) on Aug 12 2021, 19:03.

Aug 11 2021

feat: add method to export rotator cuff fibres in slicer file
9e4094735ef2
·Matthieu Boubat (lbovenus) on Aug 11 2021, 17:38.
refactor: update usage of landmarks structure
2a054557d35f
·Matthieu Boubat (lbovenus) on Aug 11 2021, 17:37.
refactor: default hiding of point label
f0fb2416c507
·Matthieu Boubat (lbovenus) on Aug 11 2021, 17:37.
fix: fix typo
d8041408da50
·Matthieu Boubat (lbovenus) on Aug 11 2021, 17:36.

Aug 10 2021

fix: fix insertion measurement
c4a549f91257
·Matthieu Boubat (lbovenus) on Aug 10 2021, 14:47.
refactor: update methods to new fibre insertions
acce4cf8e47e
·Matthieu Boubat (lbovenus) on Aug 10 2021, 13:03.
feat: add alternate method to measure fibres insertions
f8e92fea1c79
·Matthieu Boubat (lbovenus) on Aug 10 2021, 13:03.

Aug 9 2021

fix: fix point coordinates measurement
077e11f382f6
·tag: unique_point_insertion_equivalent
·Matthieu Boubat (lbovenus) on Aug 9 2021, 19:52.
fix: fix typo
67fcbcdcc8e3
·boubat on Aug 9 2021, 19:50.
refactor: update plot method to data structure
61353e7bd311
·Matthieu Boubat (lbovenus) on Aug 9 2021, 19:35.
feat: add method to measure insertion equivalent
ef006ce03ee6
·Matthieu Boubat (lbovenus) on Aug 9 2021, 19:34.
refactor: update method to data structure
606c23d102ca
·Matthieu Boubat (lbovenus) on Aug 9 2021, 19:33.
refactor: erase variable before loading its data
e95240648dbd
·Matthieu Boubat (lbovenus) on Aug 9 2021, 19:31.
refactor: move properties initialisation
35ad509127ed
·Matthieu Boubat (lbovenus) on Aug 9 2021, 15:40.
feat: add Slicer markups line class
f527b002d2fe
·Matthieu Boubat (lbovenus) on Aug 9 2021, 15:29.
refactor: extract method
cb009332fc5b
·Matthieu Boubat (lbovenus) on Aug 9 2021, 15:27.
feat: add class to export Slicer markups
1cdbc57c460f
·Matthieu Boubat (lbovenus) on Aug 9 2021, 15:07.
feat: add method to set markups color
d7d7617f1df1
·Matthieu Boubat (lbovenus) on Aug 9 2021, 15:00.

Aug 6 2021

refactor: homogenize slicer landmarks loading
b6e866efdf4a
·Matthieu Boubat (lbovenus) on Aug 6 2021, 15:25.
feat: export slicer plane from muscle insertions
0dfea88e81ad
·Matthieu Boubat (lbovenus) on Aug 6 2021, 15:22.
fix: fix typos
41625890c108
·Matthieu Boubat (lbovenus) on Aug 6 2021, 15:21.
refactor: change method's variable to be an argument
143abd0314bc
·Matthieu Boubat (lbovenus) on Aug 6 2021, 14:30.

Aug 5 2021

Merge branch 'slicer_tools' into 'master'
f9e3ea44f5b4
·boubat on Aug 5 2021, 10:42.

Aug 4 2021

feat: add classes to create and export Slicer markups
77fc6b09a6ab
·Matthieu Boubat (lbovenus) on Aug 4 2021, 19:24.
Merge branch 'config_modification' into 'master'
1cd277fb4c11
·boubat on Aug 4 2021, 12:35.
feat: add method to change config file parameters
bf47511c5f18
·Matthieu Boubat (lbovenus) on Aug 4 2021, 12:29.
Merge branch 'rotator_cuff_segmentation_config' into 'master'
7685b96f7577
·boubat on Aug 4 2021, 11:26.
feat: add rotator cuff segmentation config
8deefa5baa32
·Matthieu Boubat (lbovenus) on Aug 4 2021, 11:25.

Jul 28 2021

Merge branch 'insertions_ring' into 'master'
8b040d8ab736
·boubat on Jul 28 2021, 16:13.
feat: implement humeral head insertions ring
276023108883
·Matthieu Boubat (lbovenus) on Jul 28 2021, 16:12.
Merge branch 'amira_landmarks_side' into 'master'
f18477207b2f
·boubat on Jul 28 2021, 14:34.
refactor: update methods to use new methods
b5ed50c425c6
·Matthieu Boubat (lbovenus) on Jul 28 2021, 14:31.
refactor: assert the shoulder side of loaded landmarks
cf82c2a99a42
·Matthieu Boubat (lbovenus) on Jul 28 2021, 14:08.
refactor: check an alternative landmarks file
d477c3fa8a0a
·Matthieu Boubat (lbovenus) on Jul 28 2021, 14:08.
feat: extract method to import amira landmarks
07e7631e7b6c
·Matthieu Boubat (lbovenus) on Jul 28 2021, 13:59.

Jul 27 2021

feat: add methods to check landmarks files existence
13bbab2fbe5e
·Matthieu Boubat (lbovenus) on Jul 27 2021, 17:04.
Merge branch 'muscle_insertion_lateralisation' into 'master'
e7ae2c25e263
·boubat on Jul 27 2021, 16:59.

Jul 26 2021

refactor: change lateralisation algoorithm
bd3db96c7391
·Matthieu Boubat (lbovenus) on Jul 26 2021, 18:49.
feat: add method to lateralise muscle insertion
9c5479fd8746
·Matthieu Boubat (lbovenus) on Jul 26 2021, 18:41.
feat: add method to get normalised Vector
80d6f06d5c15
·Matthieu Boubat (lbovenus) on Jul 26 2021, 18:28.
Merge branch 'muscle_insertion_visualisation' into 'master'
cc98f1adc6f8
·boubat on Jul 26 2021, 18:21.
fix: fix scatter plot marker attributes
60778b05cfb6
·boubat on Jul 26 2021, 18:16.
feat: add muscle insertion in 3d visualisation
618e7df2e42e
·Matthieu Boubat (lbovenus) on Jul 26 2021, 17:43.

Jul 23 2021

fix: fix wrong method call
960be8b10aa2
·Matthieu Boubat (lbovenus) on Jul 23 2021, 14:54.

Jul 22 2021

Merge branch 'muscle_insertions_review' into 'master'
0dde3510025e
·boubat on Jul 22 2021, 17:55.
fix: fix the condition of sphere between points
fd76a341210f
·Matthieu Boubat (lbovenus) on Jul 22 2021, 17:52.
fix: remove typo
68adb3a2fd22
·Matthieu Boubat (lbovenus) on Jul 22 2021, 17:40.
refactor: extract methods
c26cc0fd171f
·Matthieu Boubat (lbovenus) on Jul 22 2021, 12:51.

Jul 21 2021

docs: update README with new config file structure
4d98ccd6d02e
·Matthieu Boubat (lbovenus) on Jul 21 2021, 18:20.

Jul 20 2021

refactor: change supraspinatus insertion
a04668cd5e0d
·Matthieu Boubat (lbovenus) on Jul 20 2021, 14:48.
refactor: extract method and update
f2f6d3662947
·Matthieu Boubat (lbovenus) on Jul 20 2021, 14:22.
refactor: simplify muscle subdivision (1,1) (= no subdivision)
ab3dea3de184
·Matthieu Boubat (lbovenus) on Jul 20 2021, 11:02.

Jul 15 2021

refactor: add try/end to special measurements
bc549d7059de
·Matthieu Boubat (lbovenus) on Jul 15 2021, 17:09.
feat: add method to get contour path
bd0a9cbea179
·Matthieu Boubat (lbovenus) on Jul 15 2021, 11:01.

Historymaster00ed43dc0d09c4e221aa553…

Sep 9 2021

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History
master00ed43dc0d09c4e221aa553…