Diffusion ShoulderDB_ImportSegmentMeasureAnalyze (master) History

R8218/ShoulderCase
masterce13181bf129dd272c9c2d2…

Sep 9 2021

doc: clarify docstring and comment
9a2b6e69de1a
·Matthieu Boubat (lbovenus) on Sep 9 2021, 19:57.

Sep 7 2021

refactor: read patient data from dicom instead of excel
c4bc71da9b28
·Matthieu Boubat (lbovenus) on Sep 7 2021, 17:26.
feat: add log sections
a14a301c6cd0
·Matthieu Boubat (lbovenus) on Sep 7 2021, 16:38.
refactor: remove special measurements
74549b84a237
·Matthieu Boubat (lbovenus) on Sep 7 2021, 16:25.
fix: correct used vector
8ca3cc274332
·Matthieu Boubat (lbovenus) on Sep 7 2021, 13:33.
feat: add imbalance angle orientation measurement
5032165219c8
·Matthieu Boubat (lbovenus) on Sep 7 2021, 12:58.

Sep 6 2021

feat: implement measurements of imbalance angles
091e229afe92
·Matthieu Boubat (lbovenus) on Sep 6 2021, 18:32.
fix: fix typo
e5756873d4cc
·Matthieu Boubat (lbovenus) on Sep 6 2021, 18:22.
refactor: change variables default value
a4877742fd5f
·Matthieu Boubat (lbovenus) on Sep 6 2021, 17:05.
refactor: rename variable and remove vertical mean
dbfff36eff7e
·Matthieu Boubat (lbovenus) on Sep 6 2021, 17:03.
refactor: update use of data export with new parameters
c23fc3b3bfa9
·Matthieu Boubat (lbovenus) on Sep 6 2021, 12:36.
refactor: change property attribute
6a9d8915e6b2
·Matthieu Boubat (lbovenus) on Sep 6 2021, 12:36.
feat: add export parameters
7f60ca3de6f3
·Matthieu Boubat (lbovenus) on Sep 6 2021, 12:35.
refactor: make variable name explicit
a66b66c4c126
·Matthieu Boubat (lbovenus) on Sep 6 2021, 12:32.

Sep 2 2021

fix: fix muscle subdivision with 1 fibre
86e0cd6553ef
·Matthieu Boubat (lbovenus) on Sep 2 2021, 12:25.

Sep 1 2021

fix: fix typo
ee54cdb29dac
·Matthieu Boubat (lbovenus) on Sep 1 2021, 18:15.

Aug 19 2021

refactor: update method to new landmarks
658834f1cb1b
·boubat on Aug 19 2021, 13:53.
refactor: update use of methods and landmarks
fc47198e3979
·Matthieu Boubat (lbovenus) on Aug 19 2021, 13:44.
refactor: update use of landmarks structure and remove side effect
9d372977a92d
·Matthieu Boubat (lbovenus) on Aug 19 2021, 13:41.
refactor: extract method
edd367ee469d
·Matthieu Boubat (lbovenus) on Aug 19 2021, 13:39.
refactor: update method to file structure
5b5f7b1580a7
·Matthieu Boubat (lbovenus) on Aug 19 2021, 13:03.
refactor: rename method
1d42250bf0a9
·Matthieu Boubat (lbovenus) on Aug 19 2021, 13:02.

Aug 18 2021

refactor: lock fibres control points
d628ee835049
·Matthieu Boubat (lbovenus) on Aug 18 2021, 17:16.
refactor: update checked filename
56e488a5c319
·Matthieu Boubat (lbovenus) on Aug 18 2021, 17:15.

Aug 16 2021

refactor: update method with new landmarks structure
53971eef95f7
·boubat on Aug 16 2021, 18:32.
refactor: update methods with new landmarks structure
b18f5afcbf1d
·Matthieu Boubat (lbovenus) on Aug 16 2021, 18:30.
refactor: remove deprecated property
4751f7bd64d3
·Matthieu Boubat (lbovenus) on Aug 16 2021, 18:29.
feat: add words validation
91527c97eec4
·Matthieu Boubat (lbovenus) on Aug 16 2021, 18:29.
refactor: update and extract methods
0a0631878501
·Matthieu Boubat (lbovenus) on Aug 16 2021, 18:28.

Aug 13 2021

feat: implement square grid muscles subdivision
7a91e9c70146
·Matthieu Boubat (lbovenus) on Aug 13 2021, 17:37.

Aug 12 2021

refactor: project insertions on insertions ring
56a055a27f37
·Matthieu Boubat (lbovenus) on Aug 12 2021, 19:03.

Aug 11 2021

feat: add method to export rotator cuff fibres in slicer file
9e4094735ef2
·Matthieu Boubat (lbovenus) on Aug 11 2021, 17:38.
refactor: update usage of landmarks structure
2a054557d35f
·Matthieu Boubat (lbovenus) on Aug 11 2021, 17:37.

Aug 10 2021

fix: fix insertion measurement
c4a549f91257
·Matthieu Boubat (lbovenus) on Aug 10 2021, 14:47.
refactor: update methods to new fibre insertions
acce4cf8e47e
·Matthieu Boubat (lbovenus) on Aug 10 2021, 13:03.
feat: add alternate method to measure fibres insertions
f8e92fea1c79
·Matthieu Boubat (lbovenus) on Aug 10 2021, 13:03.

Aug 9 2021

fix: fix point coordinates measurement
077e11f382f6
·tag: unique_point_insertion_equivalent
·Matthieu Boubat (lbovenus) on Aug 9 2021, 19:52.
fix: fix typo
67fcbcdcc8e3
·boubat on Aug 9 2021, 19:50.
refactor: update plot method to data structure
61353e7bd311
·Matthieu Boubat (lbovenus) on Aug 9 2021, 19:35.
feat: add method to measure insertion equivalent
ef006ce03ee6
·Matthieu Boubat (lbovenus) on Aug 9 2021, 19:34.
refactor: update method to data structure
606c23d102ca
·Matthieu Boubat (lbovenus) on Aug 9 2021, 19:33.
refactor: erase variable before loading its data
e95240648dbd
·Matthieu Boubat (lbovenus) on Aug 9 2021, 19:31.
refactor: move properties initialisation
35ad509127ed
·Matthieu Boubat (lbovenus) on Aug 9 2021, 15:40.

Aug 6 2021

refactor: homogenize slicer landmarks loading
b6e866efdf4a
·Matthieu Boubat (lbovenus) on Aug 6 2021, 15:25.
feat: export slicer plane from muscle insertions
0dfea88e81ad
·Matthieu Boubat (lbovenus) on Aug 6 2021, 15:22.
fix: fix typos
41625890c108
·Matthieu Boubat (lbovenus) on Aug 6 2021, 15:21.
refactor: change method's variable to be an argument
143abd0314bc
·Matthieu Boubat (lbovenus) on Aug 6 2021, 14:30.

Aug 4 2021

feat: add rotator cuff segmentation config
8deefa5baa32
·Matthieu Boubat (lbovenus) on Aug 4 2021, 11:25.

Jul 28 2021

feat: implement humeral head insertions ring
276023108883
·Matthieu Boubat (lbovenus) on Jul 28 2021, 16:12.
refactor: update methods to use new methods
b5ed50c425c6
·Matthieu Boubat (lbovenus) on Jul 28 2021, 14:31.
refactor: assert the shoulder side of loaded landmarks
cf82c2a99a42
·Matthieu Boubat (lbovenus) on Jul 28 2021, 14:08.
refactor: check an alternative landmarks file
d477c3fa8a0a
·Matthieu Boubat (lbovenus) on Jul 28 2021, 14:08.
feat: extract method to import amira landmarks
07e7631e7b6c
·Matthieu Boubat (lbovenus) on Jul 28 2021, 13:59.

Jul 27 2021

feat: add methods to check landmarks files existence
13bbab2fbe5e
·Matthieu Boubat (lbovenus) on Jul 27 2021, 17:04.

Jul 26 2021

refactor: change lateralisation algoorithm
bd3db96c7391
·Matthieu Boubat (lbovenus) on Jul 26 2021, 18:49.
feat: add method to lateralise muscle insertion
9c5479fd8746
·Matthieu Boubat (lbovenus) on Jul 26 2021, 18:41.
fix: fix scatter plot marker attributes
60778b05cfb6
·boubat on Jul 26 2021, 18:16.
feat: add muscle insertion in 3d visualisation
618e7df2e42e
·Matthieu Boubat (lbovenus) on Jul 26 2021, 17:43.

Jul 23 2021

fix: fix wrong method call
960be8b10aa2
·Matthieu Boubat (lbovenus) on Jul 23 2021, 14:54.

Jul 22 2021

fix: remove typo
68adb3a2fd22
·Matthieu Boubat (lbovenus) on Jul 22 2021, 17:40.
refactor: extract methods
c26cc0fd171f
·Matthieu Boubat (lbovenus) on Jul 22 2021, 12:51.

Jul 20 2021

refactor: change supraspinatus insertion
a04668cd5e0d
·Matthieu Boubat (lbovenus) on Jul 20 2021, 14:48.
refactor: extract method and update
f2f6d3662947
·Matthieu Boubat (lbovenus) on Jul 20 2021, 14:22.
refactor: simplify muscle subdivision (1,1) (= no subdivision)
ab3dea3de184
·Matthieu Boubat (lbovenus) on Jul 20 2021, 11:02.

Jul 15 2021

feat: add method to get contour path
bd0a9cbea179
·Matthieu Boubat (lbovenus) on Jul 15 2021, 11:01.

Jul 14 2021

fix: choose same archive as loadCase() method
03f2e11a7a1b
·Matthieu Boubat (lbovenus) on Jul 14 2021, 11:06.

Jul 13 2021

refactor: change char arrays for strings
b06b59f49927
·Matthieu Boubat (lbovenus) on Jul 13 2021, 14:43.

Jul 2 2021

feat: add number of muscle subdivisions in config
f0f61b542b79
·Matthieu Boubat (lbovenus) on Jul 2 2021, 12:58.

Jul 1 2021

feat: add antero-posterior imbalance measurement in measureSecond
cee10e471694
·Matthieu Boubat (lbovenus) on Jul 1 2021, 18:43.
fix: skip objects that are not scalar
eb0ef0cb4571
·Matthieu Boubat (lbovenus) on Jul 1 2021, 13:23.
fix: fix typo in property access
a9b16e9f1f71
·Matthieu Boubat (lbovenus) on Jul 1 2021, 12:13.

Jun 30 2021

fix: fix typo in iterator creation
3e198561271d
·boubat on Jun 30 2021, 18:18.
refactor: update iterator creation
3a1b0c5185e2
·Matthieu Boubat (lbovenus) on Jun 30 2021, 18:09.
refactor: prevent default subdivisions from being saved
aa17e16f50ee
·Matthieu Boubat (lbovenus) on Jun 30 2021, 18:08.
feat: add default muscle subdivision
5d84dff45ac0
·Matthieu Boubat (lbovenus) on Jun 30 2021, 18:07.
refactor: add specific condition handling
115f22a15e05
·Matthieu Boubat (lbovenus) on Jun 30 2021, 18:06.
fix: fix object path in nested properties
dfa2b8679b1b
·Matthieu Boubat (lbovenus) on Jun 30 2021, 18:02.
refactor: set more specific muscle insertions
ef4f372499ab
·Matthieu Boubat (lbovenus) on Jun 30 2021, 13:51.

Jun 29 2021

feat: add segmented insertions in force measurements
6df99684eaec
·Matthieu Boubat (lbovenus) on Jun 29 2021, 15:17.
feat: add method to verbose muscle name
f23bdf0f4130
·Matthieu Boubat (lbovenus) on Jun 29 2021, 15:17.
feat: add muscle insertions in humerus properties
966506e4bb0f
·Matthieu Boubat (lbovenus) on Jun 29 2021, 15:07.

Jun 28 2021

refactor: remove deprecated function
ccebeccd560a
·Matthieu Boubat (lbovenus) on Jun 28 2021, 17:44.
fix: stabilize PCSA over subdivisions
b45679a6b3c9
·Matthieu Boubat (lbovenus) on Jun 28 2021, 17:17.

Jun 24 2021

fix: prevent fully atrophied muscle to raise error
1b58cbda7953
·Matthieu Boubat (lbovenus) on Jun 24 2021, 15:32.
fix: set correct iterator range
282b38575986
·boubat on Jun 24 2021, 14:06.

Jun 23 2021

fix: fix misdivisions of masks including the 0 angle
a262bb9dd300
·boubat on Jun 23 2021, 20:04.
fix: change iterator to follow iterated array
d56230c45d9b
·boubat on Jun 23 2021, 19:56.
fix: change method to work with 1 point array
586913c7c5b5
·boubat on Jun 23 2021, 19:43.

Jun 22 2021

refactor: change property access
12dd8059c31e
·boubat on Jun 22 2021, 19:29.
refactor: make method compliant with subdivisions
e8cc33c17c52
·Matthieu Boubat (lbovenus) on Jun 22 2021, 19:03.
refactor: add rotator cuff force resultant for every subdivision
61d7e7c30acd
·Matthieu Boubat (lbovenus) on Jun 22 2021, 18:54.
refactor: add force vector, taking the degeneration into account, for every…
d2f29cae7c44
·Matthieu Boubat (lbovenus) on Jun 22 2021, 18:33.
refactor: add force application points for every subdivision
c3e0569ea397
·Matthieu Boubat (lbovenus) on Jun 22 2021, 18:26.
refactor: make muscle measurements done for every subdivision
86c6944cab21
·Matthieu Boubat (lbovenus) on Jun 22 2021, 18:21.
refactor: make centroids have the same index as subdivisions
e90ebf090c74
·Matthieu Boubat (lbovenus) on Jun 22 2021, 18:12.

Jun 18 2021

refactor: update method to use muscle subdivisions
897e889584bc
·boubat on Jun 18 2021, 19:35.
refactor: update method to use muscle subdivisions
ba3bb649febc
·boubat on Jun 18 2021, 19:03.
fix: change method used
2e51341bed57
·boubat on Jun 18 2021, 19:02.
feat: implement Muscle subdivision
6f9a8065808b
·boubat on Jun 18 2021, 18:41.
fix: make element consistent with matlab array indexing
455ac22de2b1
·boubat on Jun 18 2021, 18:39.

R8218/ShoulderCasemasterce13181bf129dd272c9c2d2…

Sep 9 2021

Sep 7 2021

Sep 6 2021

Sep 2 2021

Sep 1 2021

Aug 19 2021

Aug 18 2021

Aug 16 2021

Aug 13 2021

Aug 12 2021

Aug 11 2021

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Aug 9 2021

Aug 6 2021

Aug 4 2021

Jul 28 2021

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Jul 1 2021

Jun 30 2021

Jun 29 2021

Jun 28 2021

Jun 24 2021

Jun 23 2021

Jun 22 2021

Jun 18 2021

R8218/ShoulderCase
masterce13181bf129dd272c9c2d2…