This is pdfTeX, Version 3.14159265-2.6-1.40.18 (TeX Live 2017) (preloaded format=pdflatex 2017.8.24) 29 NOV 2019 01:35 entering extended mode restricted \write18 enabled. file:line:error style messages enabled. %&-line parsing enabled. **IOPLaTeXGuidelines.tex (./IOPLaTeXGuidelines.tex LaTeX2e <2017-04-15> Babel <3.10> and hyphenation patterns for 84 language(s) loaded. (./iopart.cls Document Class: iopart 1996/06/10 v0.0 IOP Journals LaTeX article class (./iopart12.clo File: iopart12.clo 1997/01/15 v1.0 LaTeX2e file (size option) ) \c@jnl=\count79 \c@section=\count80 \c@subsection=\count81 \c@subsubsection=\count82 \c@paragraph=\count83 \c@subparagraph=\count84 \c@figure=\count85 \c@table=\count86 \abovecaptionskip=\skip41 \belowcaptionskip=\skip42 \indentedwidth=\skip43 \mathindent=\dimen102 \c@eqnval=\count87 ) (./iopams.sty Package: iopams 1997/02/13 v1.0 (/usr/local/texlive/2017/texmf-dist/tex/latex/amsmath/amsgen.sty File: amsgen.sty 1999/11/30 v2.0 generic functions \@emptytoks=\toks14 \ex@=\dimen103 ) (/usr/local/texlive/2017/texmf-dist/tex/latex/amsfonts/amsfonts.sty Package: amsfonts 2013/01/14 v3.01 Basic AMSFonts support \symAMSa=\mathgroup4 \symAMSb=\mathgroup5 LaTeX Font Info: Overwriting math alphabet `\mathfrak' in version `bold' (Font) U/euf/m/n --> U/euf/b/n on input line 106. ) (/usr/local/texlive/2017/texmf-dist/tex/latex/amsfonts/amssymb.sty Package: amssymb 2013/01/14 v3.01 AMS font symbols ) (/usr/local/texlive/2017/texmf-dist/tex/latex/amsmath/amsbsy.sty Package: amsbsy 1999/11/29 v1.2d Bold Symbols \pmbraise@=\dimen104 )) (/usr/local/texlive/2017/texmf-dist/tex/latex/graphics/graphics.sty Package: graphics 2017/04/14 v1.1b Standard LaTeX Graphics (DPC,SPQR) (/usr/local/texlive/2017/texmf-dist/tex/latex/graphics/trig.sty Package: trig 2016/01/03 v1.10 sin cos tan (DPC) ) (/usr/local/texlive/2017/texmf-dist/tex/latex/graphics-cfg/graphics.cfg File: graphics.cfg 2016/06/04 v1.11 sample graphics configuration ) Package graphics Info: Driver file: pdftex.def on input line 99. (/usr/local/texlive/2017/texmf-dist/tex/latex/graphics-def/pdftex.def File: pdftex.def 2017/01/12 v0.06k Graphics/color for pdfTeX (/usr/local/texlive/2017/texmf-dist/tex/generic/oberdiek/infwarerr.sty Package: infwarerr 2016/05/16 v1.4 Providing info/warning/error messages (HO) ) (/usr/local/texlive/2017/texmf-dist/tex/generic/oberdiek/ltxcmds.sty Package: ltxcmds 2016/05/16 v1.23 LaTeX kernel commands for general use (HO) ) \Gread@gobject=\count88 )) (/usr/local/texlive/2017/texmf-dist/tex/latex/amscls/amsthm.sty Package: amsthm 2015/03/04 v2.20.2 \thm@style=\toks15 \thm@bodyfont=\toks16 \thm@headfont=\toks17 \thm@notefont=\toks18 \thm@headpunct=\toks19 \thm@preskip=\skip44 \thm@postskip=\skip45 \thm@headsep=\skip46 \dth@everypar=\toks20 ) (/usr/local/texlive/2017/texmf-dist/tex/latex/graphics/graphicx.sty Package: graphicx 2014/10/28 v1.0g Enhanced LaTeX Graphics (DPC,SPQR) (/usr/local/texlive/2017/texmf-dist/tex/latex/graphics/keyval.sty Package: keyval 2014/10/28 v1.15 key=value parser (DPC) \KV@toks@=\toks21 ) \Gin@req@height=\dimen105 \Gin@req@width=\dimen106 ) (/usr/local/texlive/2017/texmf-dist/tex/latex/psnfss/pifont.sty Package: pifont 2005/04/12 PSNFSS-v9.2a Pi font support (SPQR) LaTeX Font Info: Try loading font information for U+pzd on input line 63. (/usr/local/texlive/2017/texmf-dist/tex/latex/psnfss/upzd.fd File: upzd.fd 2001/06/04 font definitions for U/pzd. ) LaTeX Font Info: Try loading font information for U+psy on input line 64. (/usr/local/texlive/2017/texmf-dist/tex/latex/psnfss/upsy.fd File: upsy.fd 2001/06/04 font definitions for U/psy. )) (/usr/local/texlive/2017/texmf-dist/tex/latex/algorithm2e/algorithm2e.sty Package: algorithm2e 2013/01/06 v5.00 algorithms environments \c@AlgoLine=\count89 (/usr/local/texlive/2017/texmf-dist/tex/latex/base/ifthen.sty Package: ifthen 2014/09/29 v1.1c Standard LaTeX ifthen package (DPC) ) \algocf@hangindent=\skip47 (/usr/local/texlive/2017/texmf-dist/tex/latex/tools/xspace.sty Package: xspace 2014/10/28 v1.13 Space after command names (DPC,MH) ) (/usr/local/texlive/2017/texmf-dist/tex/latex/relsize/relsize.sty Package: relsize 2013/03/29 ver 4.1 ) ******************************************************** Package `algorithm2e' Release 5.1 -- october 19 2015 -- - algorithm2e-announce@lirmm.fr mailing list for announcement about releases - algorithm2e-discussion@lirmm.fr mailing list for discussion about package subscribe by emailing sympa@lirmm.fr with 'subscribe ' - Author: Christophe Fiorio (christophe.fiorio@umontpellier.fr) ******************************************************** \skiptotal=\skip48 \skiplinenumber=\skip49 \skiprule=\skip50 \skiphlne=\skip51 \skiptext=\skip52 \skiplength=\skip53 \algomargin=\skip54 \skipalgocfslide=\skip55 \algowidth=\dimen107 \inoutsize=\dimen108 \inoutindent=\dimen109 \interspacetitleruled=\dimen110 \interspacealgoruled=\dimen111 \interspacetitleboxruled=\dimen112 \algocf@ruledwidth=\skip56 \algocf@inoutbox=\box26 \algocf@inputbox=\box27 \AlCapSkip=\skip57 \AlCapHSkip=\skip58 \algoskipindent=\skip59 \algocf@nlbox=\box28 \algocf@hangingbox=\box29 \algocf@untilbox=\box30 \algocf@skipuntil=\skip60 \algocf@capbox=\box31 \algoheightruledefault=\skip61 \algoheightrule=\skip62 \algotitleheightruledefault=\skip63 \algotitleheightrule=\skip64 \c@algocfline=\count90 \c@algocfproc=\count91 \c@algocf=\count92 \algocf@algoframe=\box32 \algocf@algobox=\box33 ) (/usr/local/texlive/2017/texmf-dist/tex/latex/oberdiek/pdflscape.sty Package: pdflscape 2016/05/14 v0.11 Display of landscape pages in PDF (HO) (/usr/local/texlive/2017/texmf-dist/tex/latex/graphics/lscape.sty Package: lscape 2000/10/22 v3.01 Landscape Pages (DPC) ) (/usr/local/texlive/2017/texmf-dist/tex/generic/oberdiek/ifpdf.sty Package: ifpdf 2017/03/15 v3.2 Provides the ifpdf switch ) Package pdflscape Info: Auto-detected driver: pdftex on input line 81. (/usr/local/texlive/2017/texmf-dist/tex/generic/ifxetex/ifxetex.sty Package: ifxetex 2010/09/12 v0.6 Provides ifxetex conditional )) (/usr/local/texlive/2017/texmf-dist/tex/latex/sttools/floatpag.sty Package: floatpag 2012/05/29 v1.1 Different pagestyles on float pages Package: floatpag 1999/04/29 FLOAT PAGESTYLE ) (/usr/local/texlive/2017/texmf-dist/tex/latex/mwe/mwe.sty Package: mwe 2012/05/15 v0.3 Package to support minimal working examples (MWE) (/usr/local/texlive/2017/texmf-dist/tex/latex/lipsum/lipsum.sty Package: lipsum 2014/07/27 v1.3 150 paragraphs of Lorem Ipsum dummy text \c@lips@count=\count93 ) (/usr/local/texlive/2017/texmf-dist/tex/latex/blindtext/blindtext.sty Package: blindtext 2012/01/06 V2.0 blindtext-Package \c@blindtext=\count94 \c@Blindtext=\count95 \c@blind@countparstart=\count96 \blind@countxx=\count97 \blindtext@numBlindtext=\count98 \blind@countyy=\count99 \c@blindlist=\count100 \c@blindlistlevel=\count101 \c@blindlist@level=\count102 \blind@listitem=\count103 \c@blind@listcount=\count104 \c@blind@levelcount=\count105 \blind@mathformula=\count106 \blind@Mathformula=\count107 \c@blind@randomcount=\count108 \c@blind@randommax=\count109 \c@blind@pangramcount=\count110 \c@blind@pangrammax=\count111 )) (/usr/local/texlive/2017/texmf-dist/tex/latex/changepage/changepage.sty Package: changepage 2009/10/20 v1.0c check page and change page layout \c@cp@cntr=\count112 \cp@tempcnt=\count113 ) (/usr/local/texlive/2017/texmf-dist/tex/latex/adjustbox/adjustbox.sty Package: adjustbox 2012/05/21 v1.0 Adjusting TeX boxes (trim, clip, ...) (/usr/local/texlive/2017/texmf-dist/tex/latex/xkeyval/xkeyval.sty Package: xkeyval 2014/12/03 v2.7a package option processing (HA) (/usr/local/texlive/2017/texmf-dist/tex/generic/xkeyval/xkeyval.tex (/usr/local/texlive/2017/texmf-dist/tex/generic/xkeyval/xkvutils.tex \XKV@toks=\toks22 \XKV@tempa@toks=\toks23 ) \XKV@depth=\count114 File: xkeyval.tex 2014/12/03 v2.7a key=value parser (HA) )) (/usr/local/texlive/2017/texmf-dist/tex/latex/adjustbox/adjcalc.sty Package: adjcalc 2012/05/16 v1.1 Provides advanced setlength with multiple back -ends (calc, etex, pgfmath) ) (/usr/local/texlive/2017/texmf-dist/tex/latex/adjustbox/trimclip.sty Package: trimclip 2012/05/16 v1.0 Trim and clip general TeX material (/usr/local/texlive/2017/texmf-dist/tex/latex/collectbox/collectbox.sty Package: collectbox 2012/05/17 v0.4b Collect macro arguments as boxes \collectedbox=\box34 ) \tc@llx=\dimen113 \tc@lly=\dimen114 \tc@urx=\dimen115 \tc@ury=\dimen116 Package trimclip Info: Using driver 'tc-pdftex.def'. (/usr/local/texlive/2017/texmf-dist/tex/latex/adjustbox/tc-pdftex.def File: tc-pdftex.def 2012/05/13 v1.0 Clipping driver for pdftex )) \adjbox@Width=\dimen117 \adjbox@Height=\dimen118 \adjbox@Depth=\dimen119 \adjbox@Totalheight=\dimen120 (/usr/local/texlive/2017/texmf-dist/tex/latex/ifoddpage/ifoddpage.sty Package: ifoddpage 2016/04/23 v1.1 Conditionals for odd/even page detection \c@checkoddpage=\count115 LaTeX Info: Redefining \checkoddpage on input line 45. ) (/usr/local/texlive/2017/texmf-dist/tex/latex/varwidth/varwidth.sty Package: varwidth 2009/03/30 ver 0.92; Variable-width minipages \@vwid@box=\box35 \sift@deathcycles=\count116 \@vwid@loff=\dimen121 \@vwid@roff=\dimen122 )) (/usr/local/texlive/2017/texmf-dist/tex/latex/parskip/parskip.sty Package: parskip 2001/04/09 non-zero parskip adjustments ) (/usr/local/texlive/2017/texmf-dist/tex/latex/harvard/harvard.sty Package: harvard ) (./IOPLaTeXGuidelines.aux) \openout1 = `IOPLaTeXGuidelines.aux'. LaTeX Font Info: Checking defaults for OML/cmm/m/it on input line 24. LaTeX Font Info: ... okay on input line 24. LaTeX Font Info: Checking defaults for T1/cmr/m/n on input line 24. LaTeX Font Info: ... okay on input line 24. LaTeX Font Info: Checking defaults for OT1/cmr/m/n on input line 24. LaTeX Font Info: ... okay on input line 24. LaTeX Font Info: Checking defaults for OMS/cmsy/m/n on input line 24. LaTeX Font Info: ... okay on input line 24. LaTeX Font Info: Checking defaults for OMX/cmex/m/n on input line 24. LaTeX Font Info: ... okay on input line 24. LaTeX Font Info: Checking defaults for U/cmr/m/n on input line 24. LaTeX Font Info: ... okay on input line 24. (/usr/local/texlive/2017/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] \scratchcounter=\count117 \scratchdimen=\dimen123 \scratchbox=\box36 \nofMPsegments=\count118 \nofMParguments=\count119 \everyMPshowfont=\toks24 \MPscratchCnt=\count120 \MPscratchDim=\dimen124 \MPnumerator=\count121 \makeMPintoPDFobject=\count122 \everyMPtoPDFconversion=\toks25 ) (/usr/local/texlive/2017/texmf-dist/tex/generic/oberdiek/pdftexcmds.sty Package: pdftexcmds 2017/03/19 v0.25 Utility functions of pdfTeX for LuaTeX (HO ) (/usr/local/texlive/2017/texmf-dist/tex/generic/oberdiek/ifluatex.sty Package: ifluatex 2016/05/16 v1.4 Provides the ifluatex switch (HO) Package ifluatex Info: LuaTeX not detected. ) Package pdftexcmds Info: LuaTeX not detected. Package pdftexcmds Info: \pdf@primitive is available. Package pdftexcmds Info: \pdf@ifprimitive is available. Package pdftexcmds Info: \pdfdraftmode found. ) (/usr/local/texlive/2017/texmf-dist/tex/latex/oberdiek/epstopdf-base.sty Package: epstopdf-base 2016/05/15 v2.6 Base part for package epstopdf (/usr/local/texlive/2017/texmf-dist/tex/latex/oberdiek/grfext.sty Package: grfext 2016/05/16 v1.2 Manage graphics extensions (HO) (/usr/local/texlive/2017/texmf-dist/tex/generic/oberdiek/kvdefinekeys.sty Package: kvdefinekeys 2016/05/16 v1.4 Define keys (HO) )) (/usr/local/texlive/2017/texmf-dist/tex/latex/oberdiek/kvoptions.sty Package: kvoptions 2016/05/16 v3.12 Key value format for package options (HO) (/usr/local/texlive/2017/texmf-dist/tex/generic/oberdiek/kvsetkeys.sty Package: kvsetkeys 2016/05/16 v1.17 Key value parser (HO) (/usr/local/texlive/2017/texmf-dist/tex/generic/oberdiek/etexcmds.sty Package: etexcmds 2016/05/16 v1.6 Avoid name clashes with e-TeX commands (HO) Package etexcmds Info: Could not find \expanded. (etexcmds) That can mean that you are not using pdfTeX 1.50 or (etexcmds) that some package has redefined \expanded. (etexcmds) In the latter case, load this package earlier. ))) Package epstopdf-base Info: Redefining graphics rule for `.eps' on input line 4 38. Package grfext Info: Graphics extension search list: (grfext) [.pdf,.png,.jpg,.mps,.jpeg,.jbig2,.jb2,.PNG,.PDF,.JPG,.JPE G,.JBIG2,.JB2,.eps] (grfext) \AppendGraphicsExtensions on input line 456. (/usr/local/texlive/2017/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg File: epstopdf-sys.cfg 2010/07/13 v1.3 Configuration of (r)epstopdf for TeX Liv e )) LaTeX Font Info: Try loading font information for U+msa on input line 47. (/usr/local/texlive/2017/texmf-dist/tex/latex/amsfonts/umsa.fd File: umsa.fd 2013/01/14 v3.01 AMS symbols A ) LaTeX Font Info: Try loading font information for U+msb on input line 47. (/usr/local/texlive/2017/texmf-dist/tex/latex/amsfonts/umsb.fd File: umsb.fd 2013/01/14 v3.01 AMS symbols B ) [1 {/usr/local/texlive/2017/texmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2 ] [3] [4 ] Overfull \hbox (7.11931pt too wide) detected at line 122 $ \OMS/cmsy/m/n/12 L[]\OT1/cmr/m/n/12 (\OML/cmm/m/it/12 []; [][]; [][]\OT1/cmr /m/n/12 ) = \OMS/cmsy/m/n/12 ^^@[] [] \OML/cmm/m/it/12 ![]\OT1/cmr/m/n/12 (\OML /cmm/m/it/12 z[] \OMS/cmsy/m/n/12 ^^@ \OML/cmm/m/it/12 [] \OMS/cmsy/m/n/12 ^^@ [][]\OT1/cmr/bx/n/12 h[] \OMS/cmsy/m/n/12 ^^@ [][]\OT1/cmr/bx/n/12 h[]\OT1/cmr /m/n/12 ) + \OML/cmm/m/it/12 C:$ \OT1/cmr/m/n/12 (4) [] [5] [6] (./IOPLaTeXGuidelines.bbl Overfull \hbox (44.47089pt too wide) in paragraph at lines 37--43 \OT1/cmr/bx/n/10 URL: \OT1/cmr/m/it/10 https://journals.plos.org/plosbiology/ar ticle/file?id=10.1371/journal.pbio.1002469&type=printable [] Overfull \hbox (89.19704pt too wide) in paragraph at lines 54--64 \OT1/cmr/bx/n/10 URL: \OT1/cmr/m/it/10 http://dx.doi.org/10.1016/j.nicl.2014.07 .003 http://linkinghub.elsevier.com/retrieve/pii/S2213158214000953 [] [7 ] Underfull \hbox (badness 1189) in paragraph at lines 143--149 []| | \OT1/cmr/m/n/10 Kottaram, A., Johnston, L., Ganella, E., Pantelis, C., Ko tagiri, R. & Zalesky, A. (2018). [] Underfull \hbox (badness 10000) in paragraph at lines 189--196 \OT1/cmr/bx/n/10 URL: \OT1/cmr/m/it/10 http://dx.doi.org/10.1016/j.neuron.2010. 08.017 http://ac.els- [] Underfull \hbox (badness 10000) in paragraph at lines 189--196 \OT1/cmr/m/it/10 cdn.com/S0896627310006276/1-s2.0-S0896627310006276-main.pdf?[] tid=530b28c0-358b- [] Underfull \hbox (badness 10000) in paragraph at lines 198--204 \OT1/cmr/bx/n/10 URL: \OT1/cmr/m/it/10 https://ac.els-cdn.com/S1053811916307881 /1-s2.0-S1053811916307881- [] Overfull \hbox (74.40024pt too wide) in paragraph at lines 198--204 \OT1/cmr/m/it/10 main.pdf?[]tid=740fef8f-835b-4993-86d3-a6f60b841679&acdnat=152 3360042[]29ea611d8892cbd9e44c8ac92ff16e62 [] ) [8] (./IOPLaTeXGuidelines.aux) ) (\end occurred inside a group at level 1) ### simple group (level 1) entered at line 1061 ({) ### bottom level Here is how much of TeX's memory you used: 4704 strings out of 492995 67278 string characters out of 6132704 250443 words of memory out of 5000000 8123 multiletter control sequences out of 15000+600000 14165 words of font info for 51 fonts, out of 8000000 for 9000 1141 hyphenation exceptions out of 8191 39i,14n,37p,977b,3059s stack positions out of 5000i,500n,10000p,200000b,80000s < /usr/local/texlive/2017/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy8.pfb> Output written on IOPLaTeXGuidelines.pdf (8 pages, 264315 bytes). PDF statistics: 119 PDF objects out of 1000 (max. 8388607) 86 compressed objects within 1 object stream 0 named destinations out of 1000 (max. 500000) 1 words of extra memory for PDF output out of 10000 (max. 10000000)