get_figures.sh
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			dest_dir='/local/groux/phd_thesis/images/ch_spark'
			script_dir='/local/groux/phd_thesis/scripts/ch_spark'
			targ_dir='/local/groux/Kmeans_chipseq/results/article'

			mkdir -p $dest_dir

			# cp $targ_dir/figure1.pdf $dest_dir
			# cp $targ_dir/supplemental_figure1.pdf $dest_dir
			# cp $targ_dir/supplemental_figure2.pdf $dest_dir
			# cp $targ_dir/supplemental_figure4.pdf $dest_dir
			# cp $targ_dir/supplemental_figure5.pdf $dest_dir
			# cp $targ_dir/supplemental_figure8.pdf $dest_dir

			# redo the article figures in png format, with lower resolution
			Rscript $script_dir/figures.R

R9524/scripts/ch_spark/get_figures.sh9c4e9be36fc2master