Diffusion akantu (bugfixes/39-the-python-example-for-phasefield-are-broken-due-to-a-change-to-setintegrationscheme) Browse

39-the-python…

Last Change

Raw File

parser.hh
View Options

			/**
			* @file parser.hh
			*
			* @author Nicolas Richart <nicolas.richart@epfl.ch>
			*
			* @date creation: Wed Nov 13 2013
			* @date last modification: Wed Jan 13 2016
			*
			* @brief File parser interface
			*
			* @section LICENSE
			*
			* Copyright (©) 2014, 2015 EPFL (Ecole Polytechnique Fédérale de Lausanne)
			* Laboratory (LSMS - Laboratoire de Simulation en Mécanique des Solides)
			*
			* Akantu is free software: you can redistribute it and/or modify it under the
			* terms of the GNU Lesser General Public License as published by the Free
			* Software Foundation, either version 3 of the License, or (at your option) any
			* later version.
			*
			* Akantu is distributed in the hope that it will be useful, but WITHOUT ANY
			* WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
			* A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more
			* details.
			*
			* You should have received a copy of the GNU Lesser General Public License
			* along with Akantu. If not, see <http://www.gnu.org/licenses/>.
			*
			*/

			/* -------------------------------------------------------------------------- */
			#include "aka_common.hh"
			#include "aka_random_generator.hh"
			/* -------------------------------------------------------------------------- */
			#include <map>
			/* -------------------------------------------------------------------------- */

			#ifndef __AKANTU_PARSER_HH__
			#define __AKANTU_PARSER_HH__

			__BEGIN_AKANTU__

			#define AKANTU_SECTION_TYPES \
			(global)(material)(model)(mesh)(heat)(contact)(friction)( \
			embedded_interface)(rules)(non_local)(user)(solver)(neighborhood)( \
			time_step_solver)(non_linear_solver)(model_solver)(integration_scheme)( \
			not_defined)

			#define AKANTU_SECTION_TYPES_PREFIX(elem) BOOST_PP_CAT(_st_, elem)

			#define AKANTU_SECT_PREFIX(s, data, elem) AKANTU_SECTION_TYPES_PREFIX(elem)
			/// Defines the possible section types
			enum SectionType {
			BOOST_PP_SEQ_ENUM(
			BOOST_PP_SEQ_TRANSFORM(AKANTU_SECT_PREFIX, _, AKANTU_SECTION_TYPES))
			};
			#undef AKANTU_SECT_PREFIX

			#define AKANTU_SECTION_TYPE_PRINT_CASE(r, data, elem) \
			case AKANTU_SECTION_TYPES_PREFIX(elem): { \
			stream << BOOST_PP_STRINGIZE(AKANTU_SECTION_TYPES_PREFIX(elem)); \
			break; \
			}

			inline std::ostream & operator<<(std::ostream & stream, SectionType type) {
			switch (type) {
			BOOST_PP_SEQ_FOR_EACH(AKANTU_SECTION_TYPE_PRINT_CASE, _,
			AKANTU_SECTION_TYPES)
			default:
			stream << "not a SectionType";
			break;
			}
			return stream;
			}

			#undef AKANTU_SECTION_TYPE_PRINT_CASE
			/// Defines the possible search contexts/scopes (for parameter search)
			enum ParserParameterSearchCxt {
			_ppsc_current_scope = 0x1,
			_ppsc_parent_scope = 0x2,
			_ppsc_current_and_parent_scope = 0x3
			};

			/* ------------------------------------------------------------------------ */
			/* Parameters Class */
			/* ------------------------------------------------------------------------ */
			class ParserSection;

			/// @brief The ParserParameter objects represent the end of tree branches as
			/// they
			/// are the different informations contained in the input file.
			class ParserParameter {
			public:
			ParserParameter()
			: parent_section(NULL), name(std::string()), value(std::string()),
			dbg_filename(std::string()) {}

			ParserParameter(const std::string & name, const std::string & value,
			const ParserSection & parent_section)
			: parent_section(&parent_section), name(name), value(value),
			dbg_filename(std::string()) {}

			ParserParameter(const ParserParameter & param)
			: parent_section(param.parent_section), name(param.name),
			value(param.value), dbg_filename(param.dbg_filename),
			dbg_line(param.dbg_line), dbg_column(param.dbg_column) {}

			virtual ~ParserParameter() {}

			/// Get parameter name
			const std::string & getName() const { return name; }
			/// Get parameter value
			const std::string & getValue() const { return value; }

			/// Set info for debug output
			void setDebugInfo(const std::string & filename, UInt line, UInt column) {
			dbg_filename = filename;
			dbg_line = line;
			dbg_column = column;
			}

			template <typename T> inline operator T() const;

			// template <typename T> inline operator Vector<T>() const;
			// template <typename T> inline operator Matrix<T>() const;

			/// Print parameter info in stream
			void printself(std::ostream & stream,
			__attribute__((unused)) unsigned int indent = 0) const {
			stream << name << ": " << value << " (" << dbg_filename << ":" << dbg_line
			<< ":" << dbg_column << ")";
			}

			private:
			void setParent(const ParserSection & sect) { parent_section = § }

			friend class ParserSection;

			private:
			/// Pointer to the parent section
			const ParserSection * parent_section;
			/// Name of the parameter
			std::string name;
			/// Value of the parameter
			std::string value;
			/// File for debug output
			std::string dbg_filename;
			/// Position of parameter in parsed file
			UInt dbg_line, dbg_column;
			};

			/* ------------------------------------------------------------------------ */
			/* Sections Class */
			/* ------------------------------------------------------------------------ */
			/// ParserSection represents a branch of the parsing tree.
			class ParserSection {
			public:
			typedef std::multimap<SectionType, ParserSection> SubSections;
			typedef std::map<std::string, ParserParameter> Parameters;

			private:
			typedef SubSections::const_iterator const_section_iterator_;

			public:
			/* ------------------------------------------------------------------------ */
			/* SubSection iterator */
			/* ------------------------------------------------------------------------ */
			/// Iterator on sections
			class const_section_iterator {
			public:
			const_section_iterator() {}
			const_section_iterator(const const_section_iterator & other)
			: it(other.it) {}
			const_section_iterator(const const_section_iterator_ & it) : it(it) {}

			const_section_iterator & operator=(const const_section_iterator & other) {
			if (this != &other) {
			it = other.it;
			}
			return *this;
			}
			const ParserSection & operator*() const { return it->second; }
			const ParserSection * operator->() const { return &(it->second); }
			bool operator==(const const_section_iterator & other) const {
			return it == other.it;
			}
			bool operator!=(const const_section_iterator & other) const {
			return it != other.it;
			}

			const_section_iterator & operator++() {
			++it;
			return *this;
			}
			const_section_iterator operator++(int) {
			const_section_iterator tmp = *this;
			operator++();
			return tmp;
			}

			private:
			const_section_iterator_ it;
			};

			/* ------------------------------------------------------------------------ */
			/* Parameters iterator */
			/* ------------------------------------------------------------------------ */
			/// Iterator on parameters
			class const_parameter_iterator {
			public:
			const_parameter_iterator(const const_parameter_iterator & other)
			: it(other.it) {}
			const_parameter_iterator(const Parameters::const_iterator & it) : it(it) {}

			const_parameter_iterator &
			operator=(const const_parameter_iterator & other) {
			if (this != &other) {
			it = other.it;
			}
			return *this;
			}
			const ParserParameter & operator*() const { return it->second; }
			const ParserParameter * operator->() { return &(it->second); };
			bool operator==(const const_parameter_iterator & other) const {
			return it == other.it;
			}
			bool operator!=(const const_parameter_iterator & other) const {
			return it != other.it;
			}
			const_parameter_iterator & operator++() {
			++it;
			return *this;
			}
			const_parameter_iterator operator++(int) {
			const_parameter_iterator tmp = *this;
			operator++();
			return tmp;
			}

			private:
			Parameters::const_iterator it;
			};

			/* ---------------------------------------------------------------------- */
			ParserSection()
			: parent_section(NULL), name(std::string()), type(_st_not_defined) {}

			ParserSection(const std::string & name, SectionType type)
			: parent_section(NULL), name(name), type(type) {}

			ParserSection(const std::string & name, SectionType type,
			const std::string & option,
			const ParserSection & parent_section)
			: parent_section(&parent_section), name(name), type(type),
			option(option) {}

			ParserSection(const ParserSection & section)
			: parent_section(section.parent_section), name(section.name),
			type(section.type), option(section.option),
			parameters(section.parameters),
			sub_sections_by_type(section.sub_sections_by_type) {
			setChldrenPointers();
			}

			ParserSection & operator=(const ParserSection & other) {
			if (&other != this) {
			parent_section = other.parent_section;
			name = other.name;
			type = other.type;
			option = other.option;
			parameters = other.parameters;
			sub_sections_by_type = other.sub_sections_by_type;
			setChldrenPointers();
			}
			return *this;
			}

			virtual ~ParserSection();

			virtual void printself(std::ostream & stream, unsigned int indent = 0) const;

			/* ---------------------------------------------------------------------- */
			/* Creation functions */
			/* ---------------------------------------------------------------------- */
			public:
			ParserParameter & addParameter(const ParserParameter & param);
			ParserSection & addSubSection(const ParserSection & section);

			protected:
			/// Clean ParserSection content
			void clean() {
			parameters.clear();
			sub_sections_by_type.clear();
			}

			private:
			void setChldrenPointers() {
			Parameters::iterator pit = this->parameters.begin();
			for (; pit != this->parameters.end(); ++pit)
			pit->second.setParent(*this);

			SubSections::iterator sit = this->sub_sections_by_type.begin();
			for (; sit != this->sub_sections_by_type.end(); ++sit)
			sit->second.setParent(*this);
			}

			/* ---------------------------------------------------------------------- */
			/* Accessors */
			/* ---------------------------------------------------------------------- */
			public:
			/// Get begin and end iterators on subsections of certain type
			std::pair<const_section_iterator, const_section_iterator>
			getSubSections(SectionType type = _st_not_defined) const {
			if (type != _st_not_defined) {
			std::pair<const_section_iterator_, const_section_iterator_> range =
			sub_sections_by_type.equal_range(type);
			return std::pair<const_section_iterator, const_section_iterator>(
			range.first, range.second);
			} else {
			return std::pair<const_section_iterator, const_section_iterator>(
			sub_sections_by_type.begin(), sub_sections_by_type.end());
			}
			}

			/// Get number of subsections of certain type
			UInt getNbSubSections(SectionType type = _st_not_defined) const {
			if (type != _st_not_defined) {
			return this->sub_sections_by_type.count(type);
			} else {
			return this->sub_sections_by_type.size();
			}
			}

			/// Get begin and end iterators on parameters
			std::pair<const_parameter_iterator, const_parameter_iterator>
			getParameters() const {
			return std::pair<const_parameter_iterator, const_parameter_iterator>(
			parameters.begin(), parameters.end());
			}

			/* ---------------------------------------------------------------------- */
			/// Get parameter within specified context
			const ParserParameter & getParameter(
			const std::string & name,
			ParserParameterSearchCxt search_ctx = _ppsc_current_scope) const {
			Parameters::const_iterator it;
			if (search_ctx & _ppsc_current_scope)
			it = parameters.find(name);

			if (it == parameters.end()) {
			if ((search_ctx & _ppsc_parent_scope) && parent_section)
			return parent_section->getParameter(name, search_ctx);
			else {
			AKANTU_SILENT_EXCEPTION(
			"The parameter " << name
			<< " has not been found in the specified context");
			}
			}
			return it->second;
			}

			/* ------------------------------------------------------------------------ */
			/// Get parameter within specified context, with a default value in case the
			/// parameter does not exists
			template <class T>
			const T getParameter(
			const std::string & name, const T & default_value,
			ParserParameterSearchCxt search_ctx = _ppsc_current_scope) const {
			try {
			T tmp = this->getParameter(name, search_ctx);
			return tmp;
			} catch (debug::Exception &) {
			return default_value;
			}
			}

			/* ------------------------------------------------------------------------ */
			/// Check if parameter exists within specified context
			bool hasParameter(
			const std::string & name,
			ParserParameterSearchCxt search_ctx = _ppsc_current_scope) const {

			Parameters::const_iterator it;
			if (search_ctx & _ppsc_current_scope)
			it = parameters.find(name);

			if (it == parameters.end()) {
			if ((search_ctx & _ppsc_parent_scope) && parent_section)
			return parent_section->hasParameter(name, search_ctx);
			else {
			return false;
			}
			}
			return true;
			}

			/* --------------------------------------------------------------------------
			*/
			/// Get value of given parameter in context
			template <class T>
			T getParameterValue(
			const std::string & name,
			ParserParameterSearchCxt search_ctx = _ppsc_current_scope) const {
			const ParserParameter & tmp_param = getParameter(name, search_ctx);
			T t = tmp_param;
			return t;
			}

			/* --------------------------------------------------------------------------
			*/
			/// Get section name
			const std::string & getName() const { return name; }
			/// Get section type
			const SectionType & getType() const { return type; }
			/// Get section option
			const std::string & getOption(const std::string & def = "") const {
			return option != "" ? option : def;
			}

			protected:
			void setParent(const ParserSection & sect) { parent_section = § }

			/* ---------------------------------------------------------------------- */
			/* Members */
			/* ---------------------------------------------------------------------- */
			private:
			/// Pointer to the parent section
			const ParserSection * parent_section;
			/// Name of section
			std::string name;
			/// Type of section, see AKANTU_SECTION_TYPES
			SectionType type;
			/// Section option
			std::string option;
			/// Map of parameters in section
			Parameters parameters;
			/// Multi-map of subsections
			SubSections sub_sections_by_type;
			};

			/* ------------------------------------------------------------------------ */
			/* Parser Class */
			/* ------------------------------------------------------------------------ */
			/// Root of parsing tree, represents the global ParserSection
			class Parser : public ParserSection {
			public:
			Parser() : ParserSection("global", _st_global) {}

			void parse(const std::string & filename);

			std::string getLastParsedFile() const;

			static bool isPermissive() { return permissive_parser; }

			public:
			/// Parse real scalar
			static Real parseReal(const std::string & value,
			const ParserSection & section);
			/// Parse real vector
			static Vector<Real> parseVector(const std::string & value,
			const ParserSection & section);
			/// Parse real matrix
			static Matrix<Real> parseMatrix(const std::string & value,
			const ParserSection & section);
			/// Parse real random parameter
			static RandomParameter<Real>
			parseRandomParameter(const std::string & value,
			const ParserSection & section);

			protected:
			/// General parse function
			template <class T, class Grammar>
			static T parseType(const std::string & value, Grammar & grammar);

			protected:
			// friend class Parsable;
			static bool permissive_parser;
			std::string last_parsed_file;
			};

			inline std::ostream & operator<<(std::ostream & stream,
			const ParserParameter & _this) {
			_this.printself(stream);
			return stream;
			}

			inline std::ostream & operator<<(std::ostream & stream,
			const ParserSection & section) {
			section.printself(stream);
			return stream;
			}

			__END_AKANTU__

			#include "parser_tmpl.hh"

			#endif /* __AKANTU_PARSER_HH__ */

rAKA/src/io/parser/parser.hh04ead12caed2bugfixes/39-the-python…

parser.hhView Options

rAKA/src/io/parser/parser.hh
04ead12caed2bugfixes/39-the-python…

parser.hh
View Options