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aka_common.i
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/**
* @file aka_common.i
*
* @author Guillaume Anciaux <guillaume.anciaux@epfl.ch>
* @author Fabian Barras <fabian.barras@epfl.ch>
* @author Nicolas Richart <nicolas.richart@epfl.ch>
*
* @date creation: Fri Dec 12 2014
* @date last modification: Wed Jan 13 2016
*
* @brief wrapper to aka_common.hh
*
* @section LICENSE
*
* Copyright (©) 2015 EPFL (Ecole Polytechnique Fédérale de Lausanne) Laboratory
* (LSMS - Laboratoire de Simulation en Mécanique des Solides)
*
* Akantu is free software: you can redistribute it and/or modify it under the
* terms of the GNU Lesser General Public License as published by the Free
* Software Foundation, either version 3 of the License, or (at your option) any
* later version.
*
* Akantu is distributed in the hope that it will be useful, but WITHOUT ANY
* WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
* A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more
* details.
*
* You should have received a copy of the GNU Lesser General Public License
* along with Akantu. If not, see <http://www.gnu.org/licenses/>.
*
*/
%{
//#include "aka_config.hh"
#include "aka_common.hh"
#include "aka_csr.hh"
#include "element.hh"
#include "python_functor.hh"
#include "parser.hh"
%}
namespace akantu {
%ignore getUserParser;
%ignore ghost_types;
%ignore initialize(int & argc, char ** & argv);
%ignore initialize(const std::string & input_file, int & argc, char ** & argv);
%ignore finalize;
extern const Array<UInt> empty_filter;
}
%include "stl.i"
%include "parser.i"
%typemap(in) (int argc, char *argv[]) {
int i = 0;
if (!PyList_Check($input)) {
PyErr_SetString(PyExc_ValueError, "Expecting a list");
return NULL;
}
$1 = PyList_Size($input);
$2 = new char *[$1+1];
for (i = 0; i < $1; i++) {
PyObject *s = PyList_GetItem($input,i);
if (!PyString_Check(s)) {
free($2);
PyErr_SetString(PyExc_ValueError, "List items must be strings");
return NULL;
}
$2[i] = PyString_AsString(s);
}
$2[i] = 0;
}
%typemap(freearg) (int argc, char *argv[]) {
%#if defined(__INTEL_COMPILER)
//#pragma warning ( disable : 383 )
%#elif defined (__clang__) // test clang to be sure that when we test for gnu it is only gnu
%#elif (defined(__GNUC__) || defined(__GNUG__))
%# if __cplusplus > 199711L
%# pragma GCC diagnostic ignored "-Wmaybe-uninitialized"
%# endif
%#endif
delete [] $2;
%#if defined(__INTEL_COMPILER)
//#pragma warning ( disable : 383 )
%#elif defined (__clang__) // test clang to be sure that when we test for gnu it is only gnu
%#elif (defined(__GNUC__) || defined(__GNUG__))
%# if __cplusplus > 199711L
%# pragma GCC diagnostic pop
%# endif
%#endif
}
%inline %{
namespace akantu {
#if defined(AKANTU_USE_MPI)
const int MPI=1;
#else
const int MPI=0;
#endif
void _initializeWithoutArgv(const std::string & input_file) {
int nb_args = 0;
char ** null = nullptr;
initialize(input_file, nb_args, null);
}
void __finalize() {
finalize();
}
#define AKANTU_PP_STR_TO_TYPE2(s, data, elem) \
({ BOOST_PP_STRINGIZE(elem) , elem})
PyObject * getElementTypes(){
std::map<std::string, akantu::ElementType> element_types{
BOOST_PP_SEQ_FOR_EACH_I(
AKANTU_PP_ENUM, BOOST_PP_SEQ_SIZE(AKANTU_ek_regular_ELEMENT_TYPE),
BOOST_PP_SEQ_TRANSFORM(AKANTU_PP_STR_TO_TYPE2, akantu, AKANTU_ek_regular_ELEMENT_TYPE))};
return akantu::PythonFunctor::convertToPython(element_types);
}
}
%}
%pythoncode %{
import sys as _aka_sys
def __initialize(input_file="", argv=_aka_sys.argv):
if _aka_sys.modules[__name__].MPI == 1:
try:
from mpi4py import MPI
except ImportError:
pass
_initializeWithoutArgv(input_file)
def initialize(*args, **kwargs):
raise RuntimeError("No need to call initialize,"
" use parseInput to read an input file")
def finalize(*args, **kwargs):
raise RuntimeError("No need to call finalize")
def parseInput(input_file):
getStaticParser().parse(input_file)
%}
%include "aka_config.hh"
%include "aka_common.hh"
%include "aka_element_classes_info.hh"
%include "element.hh"
%include "aka_error.hh"
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