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bug_fix_in_syn…

solid_mechanics_model_mass.cc
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			/**
			* @file solid_mechanics_model_mass.cc
			*
			* @author Nicolas Richart <nicolas.richart@epfl.ch>
			*
			* @date creation: Tue Oct 05 2010
			* @date last modification: Fri Oct 16 2015
			*
			* @brief function handling mass computation
			*
			* @section LICENSE
			*
			* Copyright (©) 2010-2012, 2014, 2015 EPFL (Ecole Polytechnique Fédérale de
			* Lausanne) Laboratory (LSMS - Laboratoire de Simulation en Mécanique des
			* Solides)
			*
			* Akantu is free software: you can redistribute it and/or modify it under the
			* terms of the GNU Lesser General Public License as published by the Free
			* Software Foundation, either version 3 of the License, or (at your option) any
			* later version.
			*
			* Akantu is distributed in the hope that it will be useful, but WITHOUT ANY
			* WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
			* A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more
			* details.
			*
			* You should have received a copy of the GNU Lesser General Public License
			* along with Akantu. If not, see <http://www.gnu.org/licenses/>.
			*
			*/

			/* -------------------------------------------------------------------------- */
			#include "solid_mechanics_model.hh"
			#include "material.hh"
			#include "model_solver.hh"
			/* -------------------------------------------------------------------------- */

			__BEGIN_AKANTU__

			/* -------------------------------------------------------------------------- */
			void SolidMechanicsModel::assembleMassLumped() {
			AKANTU_DEBUG_IN();

			UInt nb_nodes = mesh.getNbNodes();

			if (this->mass == NULL) {
			std::stringstream sstr_mass;
			sstr_mass << id << ":mass";
			mass = &(alloc<Real>(sstr_mass.str(), nb_nodes, spatial_dimension, 0));
			} else {
			mass->clear();
			}

			if(!this->getDOFManager().hasLumpedMatrix("M")) {
			this->getDOFManager().getNewLumpedMatrix("M");
			}

			this->getDOFManager().clearLumpedMatrix("M");

			assembleMassLumped(_not_ghost);
			assembleMassLumped(_ghost);

			this->getDOFManager().getLumpedMatrixPerDOFs("displacement", "M", *(this->mass));

			/// for not connected nodes put mass to one in order to avoid
			/// wrong range in paraview
			Real * mass_values = mass->storage();
			for (UInt i = 0; i < nb_nodes; ++i) {
			if (fabs(mass_values[i]) < std::numeric_limits<Real>::epsilon() \|\|
			Math::isnan(mass_values[i]))
			mass_values[i] = 1.;
			}

			this->synchronize(_gst_smm_mass);
			AKANTU_DEBUG_OUT();
			}

			/* -------------------------------------------------------------------------- */
			void SolidMechanicsModel::assembleMassLumped(GhostType ghost_type) {
			AKANTU_DEBUG_IN();

			FEEngine & fem = getFEEngine();

			Array<Real> rho(0, spatial_dimension);

			Mesh::type_iterator it = mesh.firstType(spatial_dimension, ghost_type);
			Mesh::type_iterator end = mesh.lastType(spatial_dimension, ghost_type);
			for (; it != end; ++it) {
			ElementType type = *it;

			computeRho(rho, type, ghost_type);

			fem.assembleFieldLumped(rho, "M", "displacement",
			this->getDOFManager(), type, ghost_type);
			}

			AKANTU_DEBUG_OUT();
			}

			/* -------------------------------------------------------------------------- */
			void SolidMechanicsModel::assembleMass() {
			AKANTU_DEBUG_IN();

			if(!this->getDOFManager().hasMatrix("M")) {
			this->getDOFManager().getNewMatrix("M", "J");
			}

			this->getDOFManager().clearMatrix("M");
			assembleMass(_not_ghost);

			AKANTU_DEBUG_OUT();
			}

			class ComputeRhoFunctor {
			public:
			ComputeRhoFunctor(const SolidMechanicsModel & model) : model(model){};

			void operator()(Matrix<Real> & rho, const Element & element,
			__attribute__((unused)) const Matrix<Real> quad_coords) const {
			const Array<UInt> & mat_indexes =
			model.getMaterialByElement(element.type, element.ghost_type);
			Real mat_rho =
			model.getMaterial(mat_indexes(element.element)).getParam("rho");
			rho.set(mat_rho);
			}

			private:
			const SolidMechanicsModel & model;
			};

			/* -------------------------------------------------------------------------- */
			void SolidMechanicsModel::assembleMass(GhostType ghost_type) {
			AKANTU_DEBUG_IN();

			MyFEEngineType & fem = getFEEngineClass<MyFEEngineType>();

			ComputeRhoFunctor compute_rho(*this);

			Mesh::type_iterator it = mesh.firstType(spatial_dimension, ghost_type);
			Mesh::type_iterator end = mesh.lastType(spatial_dimension, ghost_type);
			for (; it != end; ++it) {
			ElementType type = *it;
			fem.assembleFieldMatrix(compute_rho, "M", "displacement",
			this->getDOFManager(), type, ghost_type);
			}

			AKANTU_DEBUG_OUT();
			}

			/* -------------------------------------------------------------------------- */
			void SolidMechanicsModel::computeRho(Array<Real> & rho, ElementType type,
			GhostType ghost_type) {
			AKANTU_DEBUG_IN();

			Material ** mat_val = &(this->materials.at(0));

			FEEngine & fem = this->getFEEngine();
			UInt nb_element = fem.getMesh().getNbElement(type, ghost_type);

			Array<UInt> & mat_indexes = this->material_index(type, ghost_type);

			UInt nb_quadrature_points = fem.getNbIntegrationPoints(type);

			rho.resize(nb_element * nb_quadrature_points);
			Array<Real>::vector_iterator rho_it = rho.begin(spatial_dimension);

			/// compute @f$ rho @f$ for each nodes of each element
			for (UInt el = 0; el < nb_element; ++el) {
			/// here rho is constant in an element
			Real mat_rho = mat_val[mat_indexes(el)]->getParam("rho");

			for (UInt n = 0; n < nb_quadrature_points; ++n, ++rho_it) {
			(*rho_it).set(mat_rho);
			}
			}

			AKANTU_DEBUG_OUT();
			}

			__END_AKANTU__

rAKA/src/model/solid_mechanics/solid_mechanics_model_mass.cccafceb59140ebugfixes/bug_fix_in_syn…

solid_mechanics_model_mass.ccView Options

rAKA/src/model/solid_mechanics/solid_mechanics_model_mass.cc
cafceb59140ebugfixes/bug_fix_in_syn…

solid_mechanics_model_mass.cc
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