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			# Version 5

			## Version 5.0.7-post1

			### Changed

			- Fixed links on the pypi description page

			## Version 5.0.7-post0

			### Changed

			- Fixed python package generation on MacOSX

			## Version 5.0.7

			### Changed

			- Bug fixes:
			- Correct a bug with empty filters when using the python interface

			## Version 5.0.6

			### Added

			- FEEngine features in python api:
			- `fem.integrate`,
			- `fem.computeBtD`,
			- `fem.computeBtDB`,
			- `fem.computeNtb`,
			- `fem.computeNtbN`,
			- `fem.getShapes`
			- `fem.getShapesDerivatives`

			- Group dump features in python api
			- `model.dumpGroup`
			- `model.setGroupDirectory`
			- `model.setGroupBaseName`
			- `model.addDumpGroupField`
			- `model.addDumpGroupFieldVector`

			## Version 5.0.5

			### Added

			- JOSS paper
			- Scalability test for elastic and cohesive for the JOSS paper

			## Version 5.0.4-post0

			### Changed

			- PyPi version 5.0.4 failed

			## Version 5.0.4

			### Added

			- SparseSolverEigen to have a simple solver in sequential
			- Python Wheel build for MacOS

			### Changed

			- DiffusionModel replaces HeatTransferModel
			- The class name HeatTransferModel is kept for backward compatibility
			- Bug fixes:
			- Assemble of the K matrix for cohesive elements was wrong since v5
			- Minor fixes


			## Version 5.0.3

			### Added

			- Extending contact mechanics python interface

			### Changed

			- Bug fixes in conctact mechanics


			## Version 5.0.2

			### Added

			- pypi package for python 3.11 and 3.12

			## Version 5.0.1

			### Changed

			- Bug fixes:
			- bad constcorectness in arrays
			- applyBC broken

			- Extending python API

			## Version 5.0.0

			### Changed

			- C++ standard 17 is now accepted
			- `Vector<T>` and `Matrix<T>` changed from internal types to Eigen::Matrix<T>
			- `VectorProxy<T>` and `MatrixProxy<T>` are now `Eigen::Map<Eigen::Matrix<T>>`
			This introduces a potential bug if codes like the following example where used:
			```
			for(auto && v_ : make_view(vectors, dim)) {
			Vector<Real> v(v_);
			...
			}
			```
			With the new version the temporary vector `v` will be a deep copy of `v_`
			instead of a shallow copy as in the previous version

			### Added

			- `make_view` as a static dimension version for vectors and matrices
			`make_view<size>(vectors)` and `make_view<rows, cols>(matrices)`
			- `zip` iterators can be named, in which case the
			return tuple is a `named_tuple`.
			```
			for(auto && t : zip("a"_n = as, "b"_n = bs)) {
			auto && a = t["a"_n];
			auto && b = t["b"_n];
			...
			}
			```

			### Deprecated

			- `begin_reinterpret` and `end_reinterpret` are error prone and deprecated in favor of `make_view`
			- `storage()` members are deprecated in favor of `data()` in order to be compatible with the STL
			- `get(.)Energy(ElementType type, Idx index)` are deprecated in favor of `get(.)Energy(const Element & element)`
			elements can be implicitly created, `getEnergy({type, index, _not_ghost})`
			- `begin_(node\|element)_group` and `end_(node\|element)_group` are replaced by `iterate(Node\|Element)Groups`
			- In the python interface:
			- the global `setDebugLevel`, `getDebugLevel` and `printBacktrace` were moved in the sub-module `debug`
			- the call to `finalize` is not needed
			- `applyDirichketBC` was replaced by `applyBC`

			### Deleted

			- `getForce`, `firstType()`, `lastType()` that where deprecated in version 4.0

			# Version 4

			## Version 4.0.1

			### Changed

			- Bug fixes

			## Version 4.0.0

			### Added

			- pybind11 binding
			- contact mechanics model
			- phase field model
			- Added a Changelog

			### Changed

			- transferred CI from jenkinsfile to gitlab CI/CD
			- API changes to make container more STL compatible
			- clear does not set to 0 anymore but empties containers
			- empty does not empty containers but tells if the container is empty
			- zero replace the old empty and set containers to 0

			### Deprecated

			- `getForce` in the `SolidMechanicsModel` becomes `getExternalForce`
			- `firstType()`, `lastType()` replaced by `elementTypes()`

			# Version 3

			## Version 3.2.0

			### Added

			- Activating PETSc solver back with the new solver interface

			### Deprecated

			- deprecating old C++ 03 code


			## Version 3.0.0

			### Added

			- Parallel cohesive elements
			- Element groups created by default for “physical_names”
			- Named arguments for functions (e.g. model.initFull(_analysis_method = _static))

			### Changed

			- Models using new interface for solvers
			- Same configuration for all models
			- Solver can be configured in input file
			- Only one function to solve a step model.solveStep()
			- Simplification of the parallel simulation with the mesh.distribute() function
			- Switch from C++ standard 2003 to 2014 Example of changes implied by this:

			for (Int g = _not_ghost; g <= _ghost; ++g) {
			GhostType gt = (GhostType)g;
			Mesh::type_iterator it = this->mesh.firstType(spatial_dimension, gt);
			Mesh::type_iterator end = this->mesh.lastType(spatial_dimension, gt);
			for (; it != end; ++it) {
			ElementType & type = *it;
			...
			}
			}

			becomes:

			for (auto ghost_type : ghost_types) {
			for (auto type : mesh.elementTypes(spatial_dimension,
			ghost_type)) {
			...
			}
			}

			### Deleted

			- PETSc interface temporary inactive
			- Periodic boundary condition temporary inactive

			# Version 2
			## Version 2.3.0

			### Added

			- swig python interface

			## Version 2.2.0

			### Added
			- Cohesive elements

			# Version 1

			## Version 1.0.0

			### Added
			- Continuum damage local and non-local
			- Models: solid mechanics, structural mechanics, heat transfer

rAKA/doc/dev-doc/changelog.md40100c58c687bugfixes/clean…

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rAKA/doc/dev-doc/changelog.md
40100c58c687bugfixes/clean…

changelog.md
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