Homec4science
Diffusion akantu (bugfixes/empty_filter_does_not_work_in_python) Browse

rAKA/src/io/parser/cppargparse/cppargparse.cc
848f0fd8c83bbugfixes/empty_filter_d…

Last Change
Raw File

cppargparse.cc
View Options

/**
* @file cppargparse.cc
*
* @author Nicolas Richart <nicolas.richart@epfl.ch>
*
* @date creation: Thu Apr 03 2014
* @date last modification: Mon Sep 15 2014
*
* @brief implementation of the ArgumentParser
*
* @section LICENSE
*
* Copyright (©) 2014 EPFL (Ecole Polytechnique Fédérale de Lausanne)
* Laboratory (LSMS - Laboratoire de Simulation en Mécanique des Solides)
*
* Akantu is free software: you can redistribute it and/or modify it under the
* terms of the GNU Lesser General Public License as published by the Free
* Software Foundation, either version 3 of the License, or (at your option) any
* later version.
*
* Akantu is distributed in the hope that it will be useful, but WITHOUT ANY
* WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
* A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more
* details.
*
* You should have received a copy of the GNU Lesser General Public License
* along with Akantu. If not, see <http://www.gnu.org/licenses/>.
*
*/
/* -------------------------------------------------------------------------- */
#include "cppargparse.hh"
#include <cstdlib>
#include <cstring>
#include <libgen.h>
#include <iostream>
#include <iomanip>
#include <string>
#include <queue>
#include <sstream>
#include <algorithm>
#include <exception>
#include <stdexcept>
namespace cppargparse {
/* -------------------------------------------------------------------------- */
static inline std::string to_upper(const std::string & str) {
std::string lstr = str;
std::transform(lstr.begin(),
lstr.end(),
lstr.begin(),
(int(*)(int))std::toupper);
return lstr;
}
/* -------------------------------------------------------------------------- */
/* ArgumentParser */
/* -------------------------------------------------------------------------- */
ArgumentParser::ArgumentParser() : external_exit(NULL), prank(0), psize(1) {
this->addArgument("-h;--help", "show this help message and exit", 0, _boolean, false, true);
}
ArgumentParser::~ArgumentParser() {
for(_Arguments::iterator it = arguments.begin(); it != arguments.end(); ++it) {
delete it->second;
}
}
void ArgumentParser::setParallelContext(int prank, int psize) {
this->prank = prank;
this->psize = psize;
}
void ArgumentParser::_exit(const std::string & msg, int status) {
if(prank == 0) {
if(msg != "") {
std::cerr << msg << std::endl;
std::cerr << std::endl;
}
this->print_help(std::cerr);
}
if(external_exit)
(*external_exit)(status);
else {
exit(status);
}
}
const ArgumentParser::Argument & ArgumentParser::operator[](const std::string & name) const {
Arguments::const_iterator it = success_parsed.find(name);
if(it != success_parsed.end()) {
return *(it->second);
} else {
throw std::range_error("No argument named \'" + name
+ "\' was found in the parsed argument,"
+ " make sur to specify it \'required\'"
+ " or to give it a default value");
}
}
bool ArgumentParser::has(const std::string & name) const
{ return (success_parsed.find(name) != success_parsed.end()); }
/* -------------------------------------------------------------------------- */
void ArgumentParser::addArgument(const std::string & name_or_flag,
const std::string & help,
int nargs,
ArgumentType type) {
_addArgument(name_or_flag, help, nargs, type);
}
ArgumentParser::_Argument & ArgumentParser::_addArgument(const std::string & name,
const std::string & help,
int nargs,
ArgumentType type) {
_Argument * arg = NULL;
switch(type) {
case _string: { arg = new ArgumentStorage<std::string>(); break; }
case _float: { arg = new ArgumentStorage<double>(); break; }
case _integer: { arg = new ArgumentStorage<int>(); break; }
case _boolean: { arg = new ArgumentStorage<bool>(); break; }
}
arg->help = help;
arg->nargs = nargs;
arg->type = type;
std::stringstream sstr(name);
std::string item;
std::vector<std::string> tmp_keys;
while (std::getline(sstr, item, ';')) {
tmp_keys.push_back(item);
}
int long_key = -1;
int short_key = -1;
bool problem = (tmp_keys.size() > 2) || (name == "");
for (std::vector<std::string>::iterator it = tmp_keys.begin(); it != tmp_keys.end(); ++it) {
if(it->find("--") == 0) {
problem |= (long_key != -1);
long_key = it - tmp_keys.begin();
} else if(it->find("-") == 0) {
problem |= (long_key != -1);
short_key = it - tmp_keys.begin();
}
}
problem |= ((tmp_keys.size() == 2) && (long_key == -1 || short_key == -1));
if(problem) {
throw std::invalid_argument("Synthax of name or flags is not correct. Possible synthax are \'-f\', \'-f;--foo\', \'--foo\', \'bar\'");
}
if(long_key != -1) {
arg->name = tmp_keys[long_key];
arg->name.erase(0, 2);
} else if(short_key != -1) {
arg->name = tmp_keys[short_key];
arg->name.erase(0, 1);
} else {
arg->name = tmp_keys[0];
pos_args.push_back(arg);
arg->required = true;
arg->is_positional = true;
}
arguments[arg->name] = arg;
if(!arg->is_positional) {
if(short_key != -1) {
std::string key = tmp_keys[short_key];
key_args[key] = arg;
arg->keys.push_back(key);
}
if(long_key != -1) {
std::string key = tmp_keys[long_key];
key_args[key] = arg;
arg->keys.push_back(key);
}
}
return *arg;
}
/* -------------------------------------------------------------------------- */
void ArgumentParser::parse(int& argc, char**& argv, int flags, bool parse_help) {
bool stop_in_not_parsed = flags & _stop_on_not_parsed;
bool remove_parsed = flags & _remove_parsed;
std::vector<std::string> argvs;
for (int i = 0; i < argc; ++i) {
argvs.push_back(std::string(argv[i]));
}
unsigned int current_position = 0;
if(this->program_name == "") {
std::string prog = argvs[current_position];
const char * c_prog = prog.c_str();
char * c_prog_tmp = strdup(c_prog);
std::string base_prog(basename(c_prog_tmp));
this->program_name = base_prog;
std::free(c_prog_tmp);
}
std::queue<_Argument *> positional_queue;
for(PositionalArgument::iterator it = pos_args.begin();
it != pos_args.end(); ++it)
positional_queue.push(*it);
std::vector<int> argvs_to_remove;
++current_position; // consume argv[0]
while(current_position < argvs.size()) {
std::string arg = argvs[current_position];
++current_position;
ArgumentKeyMap::iterator key_it = key_args.find(arg);
bool is_positional = false;
_Argument * argument_ptr = NULL;
if(key_it == key_args.end()) {
if(positional_queue.empty()) {
if(stop_in_not_parsed) this->_exit("Argument " + arg + " not recognized", EXIT_FAILURE);
continue;
} else {
argument_ptr = positional_queue.front();
is_positional = true;
--current_position;
}
} else {
argument_ptr = key_it->second;
}
if(remove_parsed && ! is_positional && argument_ptr->name != "help") {
argvs_to_remove.push_back(current_position - 1);
}
_Argument & argument = *argument_ptr;
unsigned int min_nb_val = 0, max_nb_val = 0;
switch(argument.nargs) {
case _one_if_possible: max_nb_val = 1; break; // "?"
case _at_least_one: min_nb_val = 1; // "+"
case _any: max_nb_val = argc - current_position; break; // "*"
default: min_nb_val = max_nb_val = argument.nargs; // "N"
}
std::vector<std::string> values;
unsigned int arg_consumed = 0;
if(max_nb_val <= (argc - current_position)) {
for(; arg_consumed < max_nb_val; ++arg_consumed) {
std::string v = argvs[current_position];
++current_position;
bool is_key = key_args.find(v) != key_args.end();
bool is_good_type = checkType(argument.type, v);
if(!is_key && is_good_type) {
values.push_back(v);
if(remove_parsed) argvs_to_remove.push_back(current_position - 1);
} else {
// unconsume not parsed argument for optional
if(!is_positional || (is_positional && is_key)) --current_position;
break;
}
}
}
if(arg_consumed < min_nb_val) {
if(!is_positional) {
this->_exit("Not enought values for the argument "
+ argument.name + " where provided", EXIT_FAILURE);
} else {
if(stop_in_not_parsed) this->_exit("Argument " + arg + " not recognized", EXIT_FAILURE);
}
} else {
if (is_positional) positional_queue.pop();
if(!argument.parsed) {
success_parsed[argument.name] = &argument;
argument.parsed = true;
if((argument.nargs == _one_if_possible || argument.nargs == 0) && arg_consumed == 0) {
if(argument.has_const)
argument.setToConst();
else if(argument.has_default)
argument.setToDefault();
} else {
argument.setValues(values);
}
} else {
this->_exit("Argument " + argument.name
+ " already present in the list of argument", EXIT_FAILURE);
}
}
}
for (_Arguments::iterator ait = arguments.begin();
ait != arguments.end(); ++ait) {
_Argument & argument = *(ait->second);
if(!argument.parsed) {
if(argument.has_default) {
argument.setToDefault();
success_parsed[argument.name] = &argument;
}
if(argument.required) {
this->_exit("Argument " + argument.name + " required but not given!", EXIT_FAILURE);
}
}
}
// removing the parsed argument if remove_parsed is true
if(argvs_to_remove.size()) {
std::vector<int>::const_iterator next_to_remove = argvs_to_remove.begin();
for (int i = 0, c = 0; i < argc; ++i) {
if(next_to_remove == argvs_to_remove.end() || i != *next_to_remove) {
argv[c] = argv[i];
++c;
} else {
if (next_to_remove != argvs_to_remove.end()) ++next_to_remove;
}
}
argc -= argvs_to_remove.size();
}
if(this->arguments["help"]->parsed && parse_help) {
this->_exit();
}
}
/* -------------------------------------------------------------------------- */
bool ArgumentParser::checkType(ArgumentType type, const std::string & value) const {
std::stringstream sstr(value);
switch(type) {
case _string: { std::string s; sstr >> s; break; }
case _float: { double d; sstr >> d; break; }
case _integer: { int i; sstr >> i; break; }
case _boolean: { bool b; sstr >> b; break; }
}
return (sstr.fail() == false);
}
/* -------------------------------------------------------------------------- */
void ArgumentParser::printself(std::ostream & stream) const {
for(Arguments::const_iterator it = success_parsed.begin();
it != success_parsed.end(); ++it) {
const Argument & argument = *(it->second);
argument.printself(stream);
stream << std::endl;
}
}
/* -------------------------------------------------------------------------- */
void ArgumentParser::print_usage(std::ostream & stream) const {
stream << "Usage: " << this->program_name;
std::stringstream sstr_opt;
// print shorten usage
for(_Arguments::const_iterator it = arguments.begin();
it != arguments.end(); ++it) {
const _Argument & argument = *(it->second);
if(!argument.is_positional) {
if(!argument.required) stream << " [";
stream << argument.keys[0];
this->print_usage_nargs(stream, argument);
if(!argument.required) stream << "]";
}
}
for(PositionalArgument::const_iterator it = pos_args.begin();
it != pos_args.end(); ++it) {
const _Argument & argument = **it;
this->print_usage_nargs(stream, argument);
}
stream << std::endl;
}
/* -------------------------------------------------------------------------- */
void ArgumentParser::print_usage_nargs(std::ostream & stream,
const _Argument & argument) const {
std::string u_name = to_upper(argument.name);
switch(argument.nargs) {
case _one_if_possible: stream << " [" << u_name << "]"; break;
case _at_least_one: stream << " " << u_name;
case _any: stream << " [" << u_name << " ...]"; break;
default:
for(int i = 0; i < argument.nargs; ++i) {
stream << " " << u_name;
}
}
}
void ArgumentParser::print_help(std::ostream & stream) const {
this->print_usage(stream);
if(!pos_args.empty()) {
stream << std::endl;
stream << "positional arguments:" << std::endl;
for(PositionalArgument::const_iterator it = pos_args.begin();
it != pos_args.end(); ++it) {
const _Argument & argument = **it;
this->print_help_argument(stream, argument);
}
}
if(!key_args.empty()) {
stream << std::endl;
stream << "optional arguments:" << std::endl;
for(_Arguments::const_iterator it = arguments.begin();
it != arguments.end(); ++it) {
const _Argument & argument = *(it->second);
if(!argument.is_positional) {
this->print_help_argument(stream, argument);
}
}
}
}
void ArgumentParser::print_help_argument(std::ostream & stream, const _Argument & argument) const {
std::string key("");
if(argument.is_positional)
key = argument.name;
else {
std::stringstream sstr;
for(unsigned int i = 0; i < argument.keys.size(); ++i) {
if(i != 0) sstr << ", ";
sstr << argument.keys[i];
this->print_usage_nargs(sstr, argument);
}
key = sstr.str();
}
stream << " " << std::left << std::setw(15) << key << " " << argument.help;
argument.printDefault(stream);
stream << std::endl;
}
}
c4science · Help