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rAKA akantu
fe_engine_template_tmpl_field.hh
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/**
* @file fe_engine_template_tmpl_field.hh
*
* @author Nicolas Richart <nicolas.richart@epfl.ch>
*
* @date creation: Wed Aug 09 2017
* @date last modification: Thu Dec 07 2017
*
* @brief implementation of the assemble field s functions
*
*
* Copyright (©) 2016-2018 EPFL (Ecole Polytechnique Fédérale de Lausanne)
* Laboratory (LSMS - Laboratoire de Simulation en Mécanique des Solides)
*
* Akantu is free software: you can redistribute it and/or modify it under the
* terms of the GNU Lesser General Public License as published by the Free
* Software Foundation, either version 3 of the License, or (at your option) any
* later version.
*
* Akantu is distributed in the hope that it will be useful, but WITHOUT ANY
* WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
* A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more
* details.
*
* You should have received a copy of the GNU Lesser General Public License
* along with Akantu. If not, see <http://www.gnu.org/licenses/>.
*
*/
/* -------------------------------------------------------------------------- */
#include "fe_engine_template.hh"
/* -------------------------------------------------------------------------- */
#ifndef AKANTU_FE_ENGINE_TEMPLATE_TMPL_FIELD_HH_
#define AKANTU_FE_ENGINE_TEMPLATE_TMPL_FIELD_HH_
namespace
akantu
{
/* -------------------------------------------------------------------------- */
/* Matrix lumping functions */
/* -------------------------------------------------------------------------- */
namespace
fe_engine
{
namespace
details
{
namespace
{
template
<
class
Functor
>
void
fillField
(
const
Functor
&
field_funct
,
Array
<
Real
>
&
field
,
UInt
nb_element
,
UInt
nb_integration_points
,
ElementType
type
,
GhostType
ghost_type
)
{
UInt
nb_degree_of_freedom
=
field
.
getNbComponent
();
field
.
resize
(
nb_integration_points
*
nb_element
);
auto
field_it
=
field
.
begin_reinterpret
(
nb_degree_of_freedom
,
nb_integration_points
,
nb_element
);
Element
el
{
type
,
0
,
ghost_type
};
for
(;
el
.
element
<
nb_element
;
++
el
.
element
,
++
field_it
)
{
field_funct
(
*
field_it
,
el
);
}
}
}
// namespace
}
// namespace details
}
// namespace fe_engine
/**
* Helper class to be able to write a partial specialization on the element kind
*/
namespace
fe_engine
{
namespace
details
{
template
<
ElementKind
kind
>
struct
AssembleLumpedTemplateHelper
{
template
<
template
<
ElementKind
,
class
>
class
I
,
template
<
ElementKind
>
class
S
,
ElementKind
k
,
class
IOF
>
static
void
call
(
const
FEEngineTemplate
<
I
,
S
,
k
,
IOF
>
&
/*unused*/
,
const
std
::
function
<
void
(
Matrix
<
Real
>
&
,
const
Element
&
)
>
&
/*unused*/
,
const
ID
&
/*unused*/
,
const
ID
&
/*unused*/
,
DOFManager
&
/*unused*/
,
ElementType
/*unused*/
,
GhostType
/*unused*/
)
{
AKANTU_TO_IMPLEMENT
();
}
};
#define ASSEMBLE_LUMPED(type) \
fem.template assembleFieldLumped<type>(field_funct, lumped, dof_id, \
dof_manager, ghost_type)
#define AKANTU_SPECIALIZE_ASSEMBLE_HELPER(kind) \
template <> struct AssembleLumpedTemplateHelper<kind> { \
template <template <ElementKind, class> class I, \
template <ElementKind> class S, ElementKind k, class IOF> \
static void \
call(const FEEngineTemplate<I, S, k, IOF> & fem, \
const std::function<void(Matrix<Real> &, const Element &)> & \
field_funct, \
const ID & lumped, const ID & dof_id, DOFManager & dof_manager, \
ElementType type, GhostType ghost_type) { \
AKANTU_BOOST_KIND_ELEMENT_SWITCH(ASSEMBLE_LUMPED, kind); \
} \
};
AKANTU_BOOST_ALL_KIND_LIST
(
AKANTU_SPECIALIZE_ASSEMBLE_HELPER
,
AKANTU_FE_ENGINE_LIST_ASSEMBLE_FIELDS
)
#undef AKANTU_SPECIALIZE_ASSEMBLE_HELPER
#undef AKANTU_SPECIALIZE_ASSEMBLE_HELPER_LIST_KIND
#undef ASSEMBLE_LUMPED
}
// namespace details
}
// namespace fe_engine
/* -------------------------------------------------------------------------- */
template
<
template
<
ElementKind
,
class
>
class
I
,
template
<
ElementKind
>
class
S
,
ElementKind
kind
,
class
IOF
>
void
FEEngineTemplate
<
I
,
S
,
kind
,
IOF
>::
assembleFieldLumped
(
const
std
::
function
<
void
(
Matrix
<
Real
>
&
,
const
Element
&
)
>
&
field_funct
,
const
ID
&
matrix_id
,
const
ID
&
dof_id
,
DOFManager
&
dof_manager
,
ElementType
type
,
GhostType
ghost_type
)
const
{
AKANTU_DEBUG_IN
();
fe_engine
::
details
::
AssembleLumpedTemplateHelper
<
kind
>::
call
(
*
this
,
field_funct
,
matrix_id
,
dof_id
,
dof_manager
,
type
,
ghost_type
);
AKANTU_DEBUG_OUT
();
}
/* -------------------------------------------------------------------------- */
/* -------------------------------------------------------------------------- */
template
<
template
<
ElementKind
,
class
>
class
I
,
template
<
ElementKind
>
class
S
,
ElementKind
kind
,
class
IntegrationOrderFunctor
>
template
<
ElementType
type
>
void
FEEngineTemplate
<
I
,
S
,
kind
,
IntegrationOrderFunctor
>::
assembleFieldLumped
(
const
std
::
function
<
void
(
Matrix
<
Real
>
&
,
const
Element
&
)
>
&
field_funct
,
const
ID
&
matrix_id
,
const
ID
&
dof_id
,
DOFManager
&
dof_manager
,
GhostType
ghost_type
)
const
{
AKANTU_DEBUG_IN
();
UInt
nb_degree_of_freedom
=
dof_manager
.
getDOFs
(
dof_id
).
getNbComponent
();
UInt
nb_element
=
mesh
.
getNbElement
(
type
,
ghost_type
);
UInt
nb_integration_points
=
this
->
getNbIntegrationPoints
(
type
);
Array
<
Real
>
field
(
0
,
nb_degree_of_freedom
);
fe_engine
::
details
::
fillField
(
field_funct
,
field
,
nb_element
,
nb_integration_points
,
type
,
ghost_type
);
switch
(
type
)
{
case
_triangle_6:
case
_quadrangle_8:
case
_tetrahedron_10:
case
_hexahedron_20:
case
_pentahedron_15:
this
->
template
assembleLumpedDiagonalScaling
<
type
>
(
field
,
matrix_id
,
dof_id
,
dof_manager
,
ghost_type
);
break
;
default
:
this
->
template
assembleLumpedRowSum
<
type
>
(
field
,
matrix_id
,
dof_id
,
dof_manager
,
ghost_type
);
}
AKANTU_DEBUG_OUT
();
}
/* -------------------------------------------------------------------------- */
/**
* @f$ \tilde{M}_{i} = \sum_j M_{ij} = \sum_j \int \rho \varphi_i \varphi_j dV =
* \int \rho \varphi_i dV @f$
*/
template
<
template
<
ElementKind
,
class
>
class
I
,
template
<
ElementKind
>
class
S
,
ElementKind
kind
,
class
IntegrationOrderFunctor
>
template
<
ElementType
type
>
void
FEEngineTemplate
<
I
,
S
,
kind
,
IntegrationOrderFunctor
>::
assembleLumpedRowSum
(
const
Array
<
Real
>
&
field
,
const
ID
&
matrix_id
,
const
ID
&
dof_id
,
DOFManager
&
dof_manager
,
GhostType
ghost_type
)
const
{
AKANTU_DEBUG_IN
();
UInt
shapes_size
=
ElementClass
<
type
>::
getShapeSize
();
UInt
nb_degree_of_freedom
=
field
.
getNbComponent
();
auto
*
field_times_shapes
=
new
Array
<
Real
>
(
0
,
shapes_size
*
nb_degree_of_freedom
);
shape_functions
.
template
computeNtb
<
type
>
(
field
,
*
field_times_shapes
,
ghost_type
);
UInt
nb_element
=
mesh
.
getNbElement
(
type
,
ghost_type
);
auto
*
int_field_times_shapes
=
new
Array
<
Real
>
(
nb_element
,
shapes_size
*
nb_degree_of_freedom
,
"inte_rho_x_shapes"
);
integrator
.
template
integrate
<
type
>
(
*
field_times_shapes
,
*
int_field_times_shapes
,
nb_degree_of_freedom
*
shapes_size
,
ghost_type
,
empty_filter
);
delete
field_times_shapes
;
dof_manager
.
assembleElementalArrayToLumpedMatrix
(
dof_id
,
*
int_field_times_shapes
,
matrix_id
,
type
,
ghost_type
);
delete
int_field_times_shapes
;
AKANTU_DEBUG_OUT
();
}
/* -------------------------------------------------------------------------- */
/**
* @f$ \tilde{M}_{i} = c * M_{ii} = \int_{V_e} \rho dV @f$
*/
template
<
template
<
ElementKind
,
class
>
class
I
,
template
<
ElementKind
>
class
S
,
ElementKind
kind
,
class
IntegrationOrderFunctor
>
template
<
ElementType
type
>
void
FEEngineTemplate
<
I
,
S
,
kind
,
IntegrationOrderFunctor
>::
assembleLumpedDiagonalScaling
(
const
Array
<
Real
>
&
field
,
const
ID
&
matrix_id
,
const
ID
&
dof_id
,
DOFManager
&
dof_manager
,
GhostType
ghost_type
)
const
{
AKANTU_DEBUG_IN
();
ElementType
type_p1
=
ElementClass
<
type
>::
getP1ElementType
();
UInt
nb_nodes_per_element_p1
=
Mesh
::
getNbNodesPerElement
(
type_p1
);
UInt
nb_nodes_per_element
=
Mesh
::
getNbNodesPerElement
(
type
);
UInt
nb_degree_of_freedom
=
field
.
getNbComponent
();
UInt
nb_element
=
mesh
.
getNbElement
(
type
,
ghost_type
);
Vector
<
Real
>
nodal_factor
(
nb_nodes_per_element
);
#define ASSIGN_WEIGHT_TO_NODES(corner, mid) \
{ \
for (UInt n = 0; n < nb_nodes_per_element_p1; n++) \
nodal_factor(n) = corner; \
for (UInt n = nb_nodes_per_element_p1; n < nb_nodes_per_element; n++) \
nodal_factor(n) = mid; \
}
if
(
type
==
_triangle_6
)
ASSIGN_WEIGHT_TO_NODES
(
1.
/
12.
,
1.
/
4.
);
if
(
type
==
_tetrahedron_10
)
ASSIGN_WEIGHT_TO_NODES
(
1.
/
32.
,
7.
/
48.
);
if
(
type
==
_quadrangle_8
)
ASSIGN_WEIGHT_TO_NODES
(
3.
/
76.
,
16.
/
76.
);
/** coeff. derived by scaling
* the diagonal terms of the corresponding
* consistent mass computed with 3x3 gauss points;
* coeff. are (1./36., 8./36.) for 2x2 gauss points */
if
(
type
==
_hexahedron_20
)
ASSIGN_WEIGHT_TO_NODES
(
7.
/
248.
,
16.
/
248.
);
/** coeff. derived by scaling
* the diagonal terms of the corresponding
* consistent mass computed with 3x3x3 gauss
* points; coeff. are (1./40.,
* 1./15.) for 2x2x2 gauss points */
if
(
type
==
_pentahedron_15
)
{
// coefficients derived by scaling the diagonal terms of the corresponding
// consistent mass computed with 8 gauss points;
for
(
UInt
n
=
0
;
n
<
nb_nodes_per_element_p1
;
n
++
)
{
nodal_factor
(
n
)
=
51.
/
2358.
;
}
Real
mid_triangle
=
192.
/
2358.
;
Real
mid_quadrangle
=
300.
/
2358.
;
nodal_factor
(
6
)
=
mid_triangle
;
nodal_factor
(
7
)
=
mid_triangle
;
nodal_factor
(
8
)
=
mid_triangle
;
nodal_factor
(
9
)
=
mid_quadrangle
;
nodal_factor
(
10
)
=
mid_quadrangle
;
nodal_factor
(
11
)
=
mid_quadrangle
;
nodal_factor
(
12
)
=
mid_triangle
;
nodal_factor
(
13
)
=
mid_triangle
;
nodal_factor
(
14
)
=
mid_triangle
;
}
if
(
nb_element
==
0
)
{
AKANTU_DEBUG_OUT
();
return
;
}
#undef ASSIGN_WEIGHT_TO_NODES
/// compute @f$ \int \rho dV = \rho V @f$ for each element
auto
int_field
=
std
::
make_unique
<
Array
<
Real
>>
(
field
.
size
(),
nb_degree_of_freedom
,
"inte_rho_x"
);
integrator
.
template
integrate
<
type
>
(
field
,
*
int_field
,
nb_degree_of_freedom
,
ghost_type
,
empty_filter
);
/// distribute the mass of the element to the nodes
auto
lumped_per_node
=
std
::
make_unique
<
Array
<
Real
>>
(
nb_element
,
nb_degree_of_freedom
*
nb_nodes_per_element
,
"mass_per_node"
);
auto
int_field_it
=
int_field
->
begin
(
nb_degree_of_freedom
);
auto
lumped_per_node_it
=
lumped_per_node
->
begin
(
nb_degree_of_freedom
,
nb_nodes_per_element
);
for
(
UInt
e
=
0
;
e
<
nb_element
;
++
e
)
{
for
(
UInt
n
=
0
;
n
<
nb_nodes_per_element
;
++
n
)
{
Vector
<
Real
>
l
=
(
*
lumped_per_node_it
)(
n
);
l
=
*
int_field_it
;
l
*=
nodal_factor
(
n
);
}
++
int_field_it
;
++
lumped_per_node_it
;
}
dof_manager
.
assembleElementalArrayToLumpedMatrix
(
dof_id
,
*
lumped_per_node
,
matrix_id
,
type
,
ghost_type
);
AKANTU_DEBUG_OUT
();
}
/* -------------------------------------------------------------------------- */
/**
* Helper class to be able to write a partial specialization on the element kind
*/
namespace
fe_engine
{
namespace
details
{
template
<
ElementKind
kind
>
struct
AssembleFieldMatrixHelper
{
template
<
template
<
ElementKind
,
class
>
class
I
,
template
<
ElementKind
>
class
S
,
ElementKind
k
,
class
IOF
>
static
void
call
(
const
FEEngineTemplate
<
I
,
S
,
k
,
IOF
>
&
/*unused*/
,
const
std
::
function
<
void
(
Matrix
<
Real
>
&
,
const
Element
&
)
>
&
/*unused*/
,
const
ID
&
/*unused*/
,
const
ID
&
/*unused*/
,
DOFManager
&
/*unused*/
,
ElementType
/*unused*/
,
GhostType
/*unused*/
)
{
AKANTU_TO_IMPLEMENT
();
}
};
#define ASSEMBLE_MATRIX(type) \
fem.template assembleFieldMatrix<type>(field_funct, matrix_id, dof_id, \
dof_manager, ghost_type)
#define AKANTU_SPECIALIZE_ASSEMBLE_FIELD_MATRIX_HELPER(kind) \
template <> struct AssembleFieldMatrixHelper<kind> { \
template <template <ElementKind, class> class I, \
template <ElementKind> class S, ElementKind k, class IOF> \
static void \
call(const FEEngineTemplate<I, S, k, IOF> & fem, \
const std::function<void(Matrix<Real> &, const Element &)> & \
field_funct, \
const ID & matrix_id, const ID & dof_id, DOFManager & dof_manager, \
ElementType type, GhostType ghost_type) { \
AKANTU_BOOST_KIND_ELEMENT_SWITCH(ASSEMBLE_MATRIX, kind); \
} \
};
AKANTU_BOOST_ALL_KIND_LIST
(
AKANTU_SPECIALIZE_ASSEMBLE_FIELD_MATRIX_HELPER
,
AKANTU_FE_ENGINE_LIST_ASSEMBLE_FIELDS
)
#undef AKANTU_SPECIALIZE_ASSEMBLE_FIELD_MATRIX_HELPER
#undef ASSEMBLE_MATRIX
}
// namespace details
}
// namespace fe_engine
/* -------------------------------------------------------------------------- */
template
<
template
<
ElementKind
,
class
>
class
I
,
template
<
ElementKind
>
class
S
,
ElementKind
kind
,
class
IOF
>
void
FEEngineTemplate
<
I
,
S
,
kind
,
IOF
>::
assembleFieldMatrix
(
const
std
::
function
<
void
(
Matrix
<
Real
>
&
,
const
Element
&
)
>
&
field_funct
,
const
ID
&
matrix_id
,
const
ID
&
dof_id
,
DOFManager
&
dof_manager
,
ElementType
type
,
GhostType
ghost_type
)
const
{
AKANTU_DEBUG_IN
();
fe_engine
::
details
::
AssembleFieldMatrixHelper
<
kind
>::
template
call
(
*
this
,
field_funct
,
matrix_id
,
dof_id
,
dof_manager
,
type
,
ghost_type
);
AKANTU_DEBUG_OUT
();
}
namespace
fe_engine
{
namespace
details
{
template
<
ElementKind
kind
>
struct
ShapesForMassHelper
{
template
<
ElementType
type
,
class
ShapeFunctions
>
static
auto
getShapes
(
ShapeFunctions
&
shape_functions
,
const
Matrix
<
Real
>
&
integration_points
,
const
Array
<
Real
>
&
nodes
,
UInt
&
nb_degree_of_freedom
,
UInt
nb_element
,
GhostType
ghost_type
)
{
UInt
shapes_size
=
ElementClass
<
type
>::
getShapeSize
();
Array
<
Real
>
shapes
(
0
,
shapes_size
);
shape_functions
.
template
computeShapesOnIntegrationPoints
<
type
>
(
nodes
,
integration_points
,
shapes
,
ghost_type
);
UInt
nb_integration_points
=
integration_points
.
cols
();
UInt
vect_size
=
nb_integration_points
*
nb_element
;
UInt
lmat_size
=
nb_degree_of_freedom
*
shapes_size
;
// Extending the shape functions
/// \todo move this in the shape functions as Voigt format shapes to
/// have the code in common with the structural elements
auto
shapes_voigt
=
std
::
make_unique
<
Array
<
Real
>>
(
vect_size
,
lmat_size
*
nb_degree_of_freedom
,
0.
);
auto
mshapes_it
=
shapes_voigt
->
begin
(
nb_degree_of_freedom
,
lmat_size
);
auto
shapes_it
=
shapes
.
begin
(
shapes_size
);
for
(
UInt
q
=
0
;
q
<
vect_size
;
++
q
,
++
mshapes_it
,
++
shapes_it
)
{
for
(
UInt
d
=
0
;
d
<
nb_degree_of_freedom
;
++
d
)
{
for
(
UInt
s
=
0
;
s
<
shapes_size
;
++
s
)
{
(
*
mshapes_it
)(
d
,
s
*
nb_degree_of_freedom
+
d
)
=
(
*
shapes_it
)(
s
);
}
}
}
return
shapes_voigt
;
}
};
template
<>
struct
ShapesForMassHelper
<
_ek_structural
>
{
template
<
ElementType
type
,
class
ShapeFunctions
>
static
auto
getShapes
(
ShapeFunctions
&
shape_functions
,
const
Matrix
<
Real
>
&
integration_points
,
const
Array
<
Real
>
&
nodes
,
UInt
&
nb_degree_of_freedom
,
UInt
/*nb_element*/
,
GhostType
ghost_type
)
{
auto
nb_unknown
=
ElementClass
<
type
>::
getNbStressComponents
();
auto
nb_degree_of_freedom_
=
ElementClass
<
type
>::
getNbDegreeOfFreedom
();
auto
nb_nodes_per_element
=
ElementClass
<
type
>::
getNbNodesPerElement
();
auto
shapes
=
std
::
make_unique
<
Array
<
Real
>>
(
0
,
nb_unknown
*
nb_nodes_per_element
*
nb_degree_of_freedom_
);
nb_degree_of_freedom
=
nb_unknown
;
shape_functions
.
template
computeShapesMassOnIntegrationPoints
<
type
>
(
nodes
,
integration_points
,
*
shapes
,
ghost_type
);
return
shapes
;
}
};
}
// namespace details
}
// namespace fe_engine
//
/* -------------------------------------------------------------------------- */
/**
* @f$ \tilde{M}_{i} = \sum_j M_{ij} = \sum_j \int \rho \varphi_i \varphi_j dV =
* \int \rho \varphi_i dV @f$
*/
template
<
template
<
ElementKind
,
class
>
class
I
,
template
<
ElementKind
>
class
S
,
ElementKind
kind
,
class
IntegrationOrderFunctor
>
template
<
ElementType
type
>
void
FEEngineTemplate
<
I
,
S
,
kind
,
IntegrationOrderFunctor
>::
assembleFieldMatrix
(
const
std
::
function
<
void
(
Matrix
<
Real
>
&
,
const
Element
&
)
>
&
field_funct
,
const
ID
&
matrix_id
,
const
ID
&
dof_id
,
DOFManager
&
dof_manager
,
GhostType
ghost_type
)
const
{
AKANTU_DEBUG_IN
();
// \int N * N so degree 2 * degree of N
const
UInt
polynomial_degree
=
2
*
ElementClassProperty
<
type
>::
polynomial_degree
;
// getting the integration points
Matrix
<
Real
>
integration_points
=
integrator
.
template
getIntegrationPoints
<
type
,
polynomial_degree
>
();
UInt
nb_degree_of_freedom
=
dof_manager
.
getDOFs
(
dof_id
).
getNbComponent
();
UInt
nb_element
=
mesh
.
getNbElement
(
type
,
ghost_type
);
// getting the shapes on the integration points
auto
shapes_voigt
=
fe_engine
::
details
::
ShapesForMassHelper
<
kind
>::
template
getShapes
<
type
>
(
shape_functions
,
integration_points
,
mesh
.
getNodes
(),
nb_degree_of_freedom
,
nb_element
,
ghost_type
);
auto
vect_size
=
shapes_voigt
->
size
();
// getting the value to assemble on the integration points
Array
<
Real
>
field
(
vect_size
,
nb_degree_of_freedom
);
fe_engine
::
details
::
fillField
(
field_funct
,
field
,
nb_element
,
integration_points
.
cols
(),
type
,
ghost_type
);
auto
lmat_size
=
shapes_voigt
->
getNbComponent
()
/
nb_degree_of_freedom
;
// computing \rho * N
Array
<
Real
>
local_mat
(
vect_size
,
lmat_size
*
lmat_size
);
auto
N_it
=
shapes_voigt
->
begin
(
nb_degree_of_freedom
,
lmat_size
);
auto
lmat_it
=
local_mat
.
begin
(
lmat_size
,
lmat_size
);
auto
field_it
=
field
.
begin_reinterpret
(
nb_degree_of_freedom
,
field
.
size
());
for
(
UInt
q
=
0
;
q
<
vect_size
;
++
q
,
++
lmat_it
,
++
N_it
,
++
field_it
)
{
const
auto
&
rho
=
*
field_it
;
const
auto
&
N
=
*
N_it
;
auto
&
mat
=
*
lmat_it
;
Matrix
<
Real
>
Nt
=
N
.
transpose
();
for
(
UInt
d
=
0
;
d
<
Nt
.
cols
();
++
d
)
{
Nt
(
d
)
*=
rho
(
d
);
}
mat
.
template
mul
<
false
,
false
>
(
Nt
,
N
);
}
// integrate the elemental values
Array
<
Real
>
int_field_times_shapes
(
nb_element
,
lmat_size
*
lmat_size
,
"inte_rho_x_shapes"
);
this
->
integrator
.
template
integrate
<
type
,
polynomial_degree
>
(
local_mat
,
int_field_times_shapes
,
lmat_size
*
lmat_size
,
ghost_type
);
// assemble the elemental values to the matrix
dof_manager
.
assembleElementalMatricesToMatrix
(
matrix_id
,
dof_id
,
int_field_times_shapes
,
type
,
ghost_type
);
AKANTU_DEBUG_OUT
();
}
}
// namespace akantu
#endif
/* AKANTU_FE_ENGINE_TEMPLATE_TMPL_FIELD_HH_ */
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