shape_cohesive_inline_impl.hh
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shape_cohesive_inline_impl.hh
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	/**
	* Copyright (©) 2012-2023 EPFL (Ecole Polytechnique Fédérale de Lausanne)
	* Laboratory (LSMS - Laboratoire de Simulation en Mécanique des Solides)
	*
	* This file is part of Akantu
	*
	* Akantu is free software: you can redistribute it and/or modify it under the
	* terms of the GNU Lesser General Public License as published by the Free
	* Software Foundation, either version 3 of the License, or (at your option) any
	* later version.
	*
	* Akantu is distributed in the hope that it will be useful, but WITHOUT ANY
	* WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
	* A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more
	* details.
	*
	* You should have received a copy of the GNU Lesser General Public License
	* along with Akantu. If not, see <http://www.gnu.org/licenses/>.
	*/

	/* -------------------------------------------------------------------------- */
	#include "mesh_iterators.hh"
	//#include "shape_cohesive.hh"
	/* -------------------------------------------------------------------------- */

	#ifndef AKANTU_SHAPE_COHESIVE_INLINE_IMPL_HH_
	#define AKANTU_SHAPE_COHESIVE_INLINE_IMPL_HH_

	namespace akantu {

	/* -------------------------------------------------------------------------- */
	inline ShapeLagrange<_ek_cohesive>::ShapeLagrange(const Mesh & mesh,
	Int spatial_dimension,
	const ID & id)
	: ShapeLagrangeBase(mesh, spatial_dimension, _ek_cohesive, id) {}

	/* -------------------------------------------------------------------------- */
	inline void ShapeLagrange<_ek_cohesive>::initShapeFunctions(
	const Array<Real> & nodes, const Matrix<Real> & integration_points,
	ElementType type, GhostType ghost_type) {
	tuple_dispatch<ElementTypes_t<_ek_cohesive>>(
	[&](auto && enum_type) {
	constexpr ElementType type = aka::decay_v<decltype(enum_type)>;
	this->setIntegrationPointsByType<type>(integration_points, ghost_type);
	this->precomputeShapesOnIntegrationPoints<type>(nodes, ghost_type);
	this->precomputeShapeDerivativesOnIntegrationPoints<type>(nodes,
	ghost_type);
	},
	type);
	}

	/* -------------------------------------------------------------------------- */
	template <ElementType type>
	void ShapeLagrange<_ek_cohesive>::computeShapeDerivativesOnIntegrationPoints(
	const Array<Real> &, const Matrix<Real> & integration_points,
	Array<Real> & shape_derivatives, GhostType ghost_type,
	const Array<Idx> & filter_elements) const {
	AKANTU_DEBUG_IN();

	auto size_of_shapesd = ElementClass<type>::getShapeDerivativesSize();
	auto spatial_dimension = ElementClass<type>::getNaturalSpaceDimension();
	auto nb_nodes_per_element =
	ElementClass<type>::getNbNodesPerInterpolationElement();

	auto nb_points = integration_points.cols();
	auto nb_element = mesh.getConnectivity(type, ghost_type).size();

	AKANTU_DEBUG_ASSERT(shape_derivatives.getNbComponent() == size_of_shapesd,
	"The shapes_derivatives array does not have the correct "
	<< "number of component");

	shape_derivatives.resize(nb_element * nb_points);
	auto * shapesd_val = shape_derivatives.data();

	auto compute = [&](const auto & el) {
	auto ptr = shapesd_val + el * nb_points * size_of_shapesd;
	Tensor3Proxy<Real> B(ptr, spatial_dimension, nb_nodes_per_element,
	nb_points);
	ElementClass<type>::computeDNDS(integration_points, B);
	};

	for_each_element(nb_element, filter_elements, compute);

	AKANTU_DEBUG_OUT();
	}

	/* -------------------------------------------------------------------------- */
	inline void
	ShapeLagrange<_ek_cohesive>::computeShapeDerivativesOnIntegrationPoints(
	const Array<Real> & nodes, const Ref<const MatrixXr> integration_points,
	Array<Real> & shape_derivatives, ElementType type, GhostType ghost_type,
	const Array<Idx> & filter_elements) const {
	tuple_dispatch<ElementTypes_t<_ek_cohesive>>(
	[&](auto && enum_type) {
	constexpr ElementType type = aka::decay_v<decltype(enum_type)>;
	this->computeShapeDerivativesOnIntegrationPoints<type>(
	nodes, integration_points, shape_derivatives, ghost_type,
	filter_elements);
	},
	type);
	}

	/* -------------------------------------------------------------------------- */
	template <ElementType type>
	void ShapeLagrange<_ek_cohesive>::precomputeShapesOnIntegrationPoints(
	const Array<Real> & nodes, GhostType ghost_type) {
	AKANTU_DEBUG_IN();

	auto itp_type = ElementClassProperty<type>::interpolation_type;
	auto & natural_coords = integration_points(type, ghost_type);
	auto size_of_shapes = ElementClass<type>::getShapeSize();

	auto & shapes_tmp = shapes.alloc(0, size_of_shapes, itp_type, ghost_type);

	this->computeShapesOnIntegrationPoints<type>(nodes, natural_coords,
	shapes_tmp, ghost_type);

	AKANTU_DEBUG_OUT();
	}

	/* -------------------------------------------------------------------------- */
	template <ElementType type>
	void ShapeLagrange<_ek_cohesive>::precomputeShapeDerivativesOnIntegrationPoints(
	const Array<Real> & nodes, GhostType ghost_type) {
	AKANTU_DEBUG_IN();

	auto itp_type = ElementClassProperty<type>::interpolation_type;
	auto & natural_coords = integration_points(type, ghost_type);
	auto size_of_shapesd = ElementClass<type>::getShapeDerivativesSize();

	auto & shapes_derivatives_tmp =
	shapes_derivatives.alloc(0, size_of_shapesd, itp_type, ghost_type);

	this->computeShapeDerivativesOnIntegrationPoints<type>(
	nodes, natural_coords, shapes_derivatives_tmp, ghost_type);

	AKANTU_DEBUG_OUT();
	}

	/* -------------------------------------------------------------------------- */
	template <ElementType type, class ReduceFunction>
	void ShapeLagrange<_ek_cohesive>::extractNodalToElementField(
	const Array<Real> & nodal_f, Array<Real> & elemental_f,
	GhostType ghost_type, const Array<Idx> & filter_elements) const {
	AKANTU_DEBUG_IN();

	auto nb_nodes_per_itp_element =
	ElementClass<type>::getNbNodesPerInterpolationElement();
	auto nb_degree_of_freedom = nodal_f.getNbComponent();
	auto nb_element = this->mesh.getNbElement(type, ghost_type);

	const auto & conn_array = this->mesh.getConnectivity(type, ghost_type);
	auto conn = make_view(conn_array, conn_array.getNbComponent() / 2, 2).begin();

	if (filter_elements != empty_filter) {
	nb_element = filter_elements.size();
	}

	elemental_f.resize(nb_element);

	auto u_it =
	make_view(elemental_f, nb_degree_of_freedom, nb_nodes_per_itp_element)
	.begin();

	auto nodal_f_it = make_view(nodal_f, nb_degree_of_freedom).begin();

	ReduceFunction reduce_function;

	auto compute = [&](const auto & el) {
	auto && u = *u_it;
	auto && el_conn = conn[el];

	// compute the average/difference of the nodal field loaded from cohesive
	// element
	for (Int n = 0; n < el_conn.rows(); ++n) {
	auto node_plus = el_conn(n, 0);
	auto node_minus = el_conn(n, 1);

	u(n) = reduce_function(nodal_f_it[node_plus], nodal_f_it[node_minus]);
	}

	++u_it;
	};

	for_each_element(nb_element, filter_elements, compute);

	AKANTU_DEBUG_OUT();
	}

	/* -------------------------------------------------------------------------- */
	template <ElementType type, class ReduceFunction>
	void ShapeLagrange<_ek_cohesive>::interpolateOnIntegrationPoints(
	const Array<Real> & in_u, Array<Real> & out_uq, Int nb_degree_of_freedom,
	GhostType ghost_type, const Array<Idx> & filter_elements) const {
	AKANTU_DEBUG_IN();

	auto itp_type = ElementClassProperty<type>::interpolation_type;

	AKANTU_DEBUG_ASSERT(this->shapes.exists(itp_type, ghost_type),
	"No shapes for the type "
	<< this->shapes.printType(itp_type, ghost_type));

	auto nb_nodes_per_element =
	ElementClass<type>::getNbNodesPerInterpolationElement();
	Array<Real> u_el(0, nb_degree_of_freedom * nb_nodes_per_element);
	this->extractNodalToElementField<type, ReduceFunction>(in_u, u_el, ghost_type,
	filter_elements);

	this->template interpolateElementalFieldOnIntegrationPoints<type>(
	u_el, out_uq, ghost_type, shapes(itp_type, ghost_type), filter_elements);

	AKANTU_DEBUG_OUT();
	}

	/* -------------------------------------------------------------------------- */
	template <ElementType type, class ReduceFunction>
	void ShapeLagrange<_ek_cohesive>::variationOnIntegrationPoints(
	const Array<Real> & in_u, Array<Real> & nablauq, Int nb_degree_of_freedom,
	GhostType ghost_type, const Array<Idx> & filter_elements) const {
	AKANTU_DEBUG_IN();

	InterpolationType itp_type = ElementClassProperty<type>::interpolation_type;

	AKANTU_DEBUG_ASSERT(
	this->shapes_derivatives.exists(itp_type, ghost_type),
	"No shapes for the type "
	<< this->shapes_derivatives.printType(itp_type, ghost_type));

	auto nb_nodes_per_element =
	ElementClass<type>::getNbNodesPerInterpolationElement();
	Array<Real> u_el(0, nb_degree_of_freedom * nb_nodes_per_element);
	this->extractNodalToElementField<type, ReduceFunction>(in_u, u_el, ghost_type,
	filter_elements);

	this->template gradientElementalFieldOnIntegrationPoints<type>(
	u_el, nablauq, ghost_type, shapes_derivatives(itp_type, ghost_type),
	filter_elements);

	AKANTU_DEBUG_OUT();
	}

	/* -------------------------------------------------------------------------- */
	template <ElementType type, class ReduceFunction>
	void ShapeLagrange<_ek_cohesive>::computeNormalsOnIntegrationPoints(
	const Array<Real> & u, Array<Real> & normals_u, GhostType ghost_type,
	const Array<Idx> & filter_elements) const {
	AKANTU_DEBUG_IN();

	auto nb_element = this->mesh.getNbElement(type, ghost_type);
	auto nb_points = this->integration_points(type, ghost_type).cols();
	auto spatial_dimension = this->mesh.getSpatialDimension();

	if (filter_elements != empty_filter) {
	nb_element = filter_elements.size();
	}

	normals_u.resize(nb_points * nb_element);

	Array<Real> tangents_u(0, (spatial_dimension * (spatial_dimension - 1)));

	if (spatial_dimension > 1) {
	tangents_u.resize(nb_element * nb_points);
	this->template variationOnIntegrationPoints<type, ReduceFunction>(
	u, tangents_u, spatial_dimension, ghost_type, filter_elements);
	}

	if (spatial_dimension == 3) {
	for (auto && data :
	zip(make_view<3>(normals_u), make_view<3, 2>(tangents_u))) {
	auto && n = std::get<0>(data);
	auto && ts = std::get<1>(data);

	n = (ts(0).cross(ts(1))).normalized();
	}
	} else if (spatial_dimension == 2) {
	for (auto && data :
	zip(make_view<2>(normals_u), make_view<2>(tangents_u))) {
	auto && n = std::get<0>(data);
	auto && t = std::get<1>(data);

	n(0) = -t(1);
	n(1) = t(0);
	n.normalize();
	}
	} else if (spatial_dimension == 1) {
	const auto facet_type = Mesh::getFacetType(type);
	const auto & mesh_facets = mesh.getMeshFacets();
	const auto & facets = mesh_facets.getSubelementToElement(type, ghost_type);
	const auto & segments =
	mesh_facets.getElementToSubelement(facet_type, ghost_type);

	Matrix<Real> barycenter(1, 2);

	for (auto el : arange(nb_element)) {
	if (filter_elements != empty_filter) {
	el = filter_elements(el);
	}

	for (Int p = 0; p < 2; ++p) {
	const Element & facet = facets(el, p);
	const Element & segment = segments(facet.element)[0];
	mesh.getBarycenter(segment, barycenter(p));
	}

	Real difference = barycenter(0, 0) - barycenter(0, 1);

	AKANTU_DEBUG_ASSERT(difference != 0.,
	"Error in normal computation for cohesive elements");

	normals_u(el) = difference / std::abs(difference);
	}
	}

	AKANTU_DEBUG_OUT();
	}

	} // namespace akantu

	#endif /* AKANTU_SHAPE_COHESIVE_INLINE_IMPL_HH_ */

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