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rAKA/src/solver/sparse_matrix_inline_impl.cc
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sparse_matrix_inline_impl.cc
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/**
* @file sparse_matrix_inline_impl.cc
*
* @author Nicolas Richart <nicolas.richart@epfl.ch>
*
* @date creation: Mon Dec 13 2010
* @date last modification: Thu Jun 05 2014
*
* @brief implementation of inline methods of the SparseMatrix class
*
* @section LICENSE
*
* Copyright (©) 2010-2012, 2014 EPFL (Ecole Polytechnique Fédérale de Lausanne)
* Laboratory (LSMS - Laboratoire de Simulation en Mécanique des Solides)
*
* Akantu is free software: you can redistribute it and/or modify it under the
* terms of the GNU Lesser General Public License as published by the Free
* Software Foundation, either version 3 of the License, or (at your option) any
* later version.
*
* Akantu is distributed in the hope that it will be useful, but WITHOUT ANY
* WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
* A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more
* details.
*
* You should have received a copy of the GNU Lesser General Public License
* along with Akantu. If not, see <http://www.gnu.org/licenses/>.
*
*/
/* -------------------------------------------------------------------------- */
inline UInt SparseMatrix::addToProfile(UInt i, UInt j) {
KeyCOO jcn_irn = key(i, j);
coordinate_list_map::iterator it = irn_jcn_k.find(jcn_irn);
if (!(it == irn_jcn_k.end()))
return it->second;
// AKANTU_DEBUG_ASSERT(irn_jcn_k.find(jcn_irn) == irn_jcn_k.end(),
// "Couple (i,j) = (" << i << "," << j << ") already in the profile");
irn.push_back(i + 1);
jcn.push_back(j + 1);
// a.resize(a.getSize() + 1);
Real zero = 0;
a.push_back(zero);
irn_jcn_k[jcn_irn] = nb_non_zero;
nb_non_zero++;
return nb_non_zero - 1;
}
/* -------------------------------------------------------------------------- */
inline void SparseMatrix::clearProfile() {
irn_jcn_k.clear();
irn.resize(0);
jcn.resize(0);
a.resize(0);
nb_non_zero = 0;
}
/* -------------------------------------------------------------------------- */
inline void SparseMatrix::clear() {
memset(a.storage(), 0, nb_non_zero*sizeof(Real));
}
/* -------------------------------------------------------------------------- */
inline void SparseMatrix::addToMatrix(UInt i, UInt j, Real value) {
KeyCOO jcn_irn = key(i, j);
coordinate_list_map::iterator irn_jcn_k_it = irn_jcn_k.find(jcn_irn);
AKANTU_DEBUG_ASSERT(irn_jcn_k_it != irn_jcn_k.end(),
"Couple (i,j) = (" << i << "," << j << ") does not exist in the profile");
a.storage()[irn_jcn_k_it->second] += value;
}
/* -------------------------------------------------------------------------- */
inline Real SparseMatrix::operator()(UInt i, UInt j) const {
KeyCOO jcn_irn = key(i, j);
coordinate_list_map::const_iterator irn_jcn_k_it = irn_jcn_k.find(jcn_irn);
if(irn_jcn_k_it == irn_jcn_k.end()) return 0;
return a.storage()[irn_jcn_k_it->second];
}
/* -------------------------------------------------------------------------- */
inline Real & SparseMatrix::operator()(UInt i, UInt j) {
KeyCOO jcn_irn = key(i, j);
coordinate_list_map::iterator irn_jcn_k_it = irn_jcn_k.find(jcn_irn);
AKANTU_DEBUG_ASSERT(irn_jcn_k_it != irn_jcn_k.end(),
"Couple (i,j) = (" << i << "," << j << ") does not exist in the profile");
return a.storage()[irn_jcn_k_it->second];
}
/* -------------------------------------------------------------------------- */
// inline void SparseMatrix::addToMatrixSym(const Array<Real> & local_matrix,
// const Element & element) {
// AKANTU_DEBUG_ASSERT(element_to_sparse_profile[element.type] != NULL,
// "No profile stored for this kind of element call first buildProfile()");
// UInt nb_values_per_elem = element_to_sparse_profile[element.type]->getNbComponent();
// UInt nb_nodes_per_element = Mesh::getNbNodesPerElement(element.type);
// Real * mat_val = local_matrix.storage();
// UInt * elem_to_sparse_val = element_to_sparse_profile[element.type]->values + element.element * nb_values_per_elem;
// Real * a_val = a.storage();
// for (UInt j = 0; j < nb_nodes_per_element * nb_degree_of_freedom; ++j) {
// UInt i_end = (sparse_matrix_type == _symmetric) ? j + 1 :
// nb_nodes_per_element * nb_degree_of_freedom;
// for (UInt i = 0; i < i_end; ++i) {
// UInt k = *(elem_to_sparse_val++);
// a_val[k] += *(mat_val++);
// }
// }
// }
/* -------------------------------------------------------------------------- */
// inline void SparseMatrix::addToMatrix(Real * local_matrix,
// const Element & element,
// UInt nb_nodes_per_element) {
// AKANTU_DEBUG_ASSERT(element_to_sparse_profile[element.type] != NULL,
// "No profile stored for this kind of element call first buildProfile()");
// UInt nb_values_per_elem = element_to_sparse_profile[element.type]->getNbComponent();
// // UInt nb_nodes_per_element = Mesh::getNbNodesPerElement(element.type);
// Real * mat_val = local_matrix;
// UInt * elem_to_sparse_val = element_to_sparse_profile[element.type]->values + element.element * nb_values_per_elem;
// Real * a_val = a.storage();
// for (UInt i = 0; i < nb_nodes_per_element * nb_degree_of_freedom; ++i) {
// UInt j_start = (sparse_matrix_type == _symmetric) ? i : 0;
// UInt elem_to_sparse_i = i * nb_nodes_per_element * nb_degree_of_freedom;
// for (UInt j = j_start; j < nb_nodes_per_element * nb_degree_of_freedom; ++j) {
// UInt k = elem_to_sparse_val[elem_to_sparse_i + j];
// a_val[k] += mat_val[elem_to_sparse_i + j];
// }
// }
// }
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