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rAKA akantu
neighborhood_max_criterion.cc
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/**
* @file neighborhood_max_criterion.cc
*
* @author Aurelia Isabel Cuba Ramos <aurelia.cubaramos@epfl.ch>
*
* @date creation: Thu Oct 15 2015
* @date last modification: Tue Feb 20 2018
*
* @brief Implementation of class NeighborhoodMaxCriterion
*
* @section LICENSE
*
* Copyright (©) 2015-2018 EPFL (Ecole Polytechnique Fédérale de Lausanne)
* Laboratory (LSMS - Laboratoire de Simulation en Mécanique des Solides)
*
* Akantu is free software: you can redistribute it and/or modify it under the
* terms of the GNU Lesser General Public License as published by the Free
* Software Foundation, either version 3 of the License, or (at your option) any
* later version.
*
* Akantu is distributed in the hope that it will be useful, but WITHOUT ANY
* WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
* A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more
* details.
*
* You should have received a copy of the GNU Lesser General Public License
* along with Akantu. If not, see <http://www.gnu.org/licenses/>.
*
*/
/* -------------------------------------------------------------------------- */
#include "neighborhood_max_criterion.hh"
#include "grid_synchronizer.hh"
/* -------------------------------------------------------------------------- */
namespace
akantu
{
/* -------------------------------------------------------------------------- */
NeighborhoodMaxCriterion
::
NeighborhoodMaxCriterion
(
Model
&
model
,
const
ElementTypeMapReal
&
quad_coordinates
,
const
ID
&
criterion_id
,
const
ID
&
id
,
const
MemoryID
&
memory_id
)
:
NeighborhoodBase
(
model
,
quad_coordinates
,
id
,
memory_id
),
Parsable
(
ParserType
::
_non_local
,
id
),
is_highest
(
"is_highest"
,
id
,
memory_id
),
criterion
(
criterion_id
,
id
,
memory_id
)
{
AKANTU_DEBUG_IN
();
this
->
registerParam
(
"radius"
,
neighborhood_radius
,
100.
,
_pat_parsable
|
_pat_readable
,
"Non local radius"
);
Mesh
&
mesh
=
this
->
model
.
getMesh
();
/// allocate the element type map arrays for _not_ghosts: One entry per quad
GhostType
ghost_type
=
_not_ghost
;
for
(
auto
type
:
mesh
.
elementTypes
(
spatial_dimension
,
ghost_type
))
{
UInt
new_size
=
this
->
quad_coordinates
(
type
,
ghost_type
).
size
();
this
->
is_highest
.
alloc
(
new_size
,
1
,
type
,
ghost_type
,
true
);
this
->
criterion
.
alloc
(
new_size
,
1
,
type
,
ghost_type
,
true
);
}
/// criterion needs allocation also for ghost
ghost_type
=
_ghost
;
for
(
auto
type
:
mesh
.
elementTypes
(
spatial_dimension
,
ghost_type
))
{
UInt
new_size
=
this
->
quad_coordinates
(
type
,
ghost_type
).
size
();
this
->
criterion
.
alloc
(
new_size
,
1
,
type
,
ghost_type
,
true
);
}
AKANTU_DEBUG_OUT
();
}
/* -------------------------------------------------------------------------- */
NeighborhoodMaxCriterion
::~
NeighborhoodMaxCriterion
()
{
AKANTU_DEBUG_IN
();
AKANTU_DEBUG_OUT
();
}
/* -------------------------------------------------------------------------- */
void
NeighborhoodMaxCriterion
::
initNeighborhood
()
{
AKANTU_DEBUG_IN
();
/// parse the input parameter
const
Parser
&
parser
=
getStaticParser
();
const
ParserSection
&
section_neighborhood
=
*
(
parser
.
getSubSections
(
ParserType
::
_neighborhood
).
first
);
this
->
parseSection
(
section_neighborhood
);
AKANTU_DEBUG_INFO
(
"Creating the grid"
);
this
->
createGrid
();
/// insert the non-ghost quads into the grid
this
->
insertAllQuads
(
_not_ghost
);
/// store the number of current ghost elements for each type in the mesh
ElementTypeMap
<
UInt
>
nb_ghost_protected
;
Mesh
&
mesh
=
this
->
model
.
getMesh
();
for
(
auto
type
:
mesh
.
elementTypes
(
spatial_dimension
,
_ghost
))
{
nb_ghost_protected
(
mesh
.
getNbElement
(
type
,
_ghost
),
type
,
_ghost
);
}
/// create the grid synchronizer
this
->
createGridSynchronizer
();
/// insert the ghost quads into the grid
this
->
insertAllQuads
(
_ghost
);
/// create the pair lists
this
->
updatePairList
();
/// remove the unneccessary ghosts
this
->
cleanupExtraGhostElements
(
nb_ghost_protected
);
AKANTU_DEBUG_OUT
();
}
/* -------------------------------------------------------------------------- */
void
NeighborhoodMaxCriterion
::
createGridSynchronizer
()
{
this
->
is_creating_grid
=
true
;
std
::
set
<
SynchronizationTag
>
tags
;
tags
.
insert
(
SynchronizationTag
::
_nh_criterion
);
std
::
stringstream
sstr
;
sstr
<<
getID
()
<<
":grid_synchronizer"
;
this
->
grid_synchronizer
=
std
::
make_unique
<
GridSynchronizer
>
(
this
->
model
.
getMesh
(),
*
spatial_grid
,
*
this
,
tags
,
sstr
.
str
(),
0
,
false
);
this
->
is_creating_grid
=
false
;
}
/* -------------------------------------------------------------------------- */
void
NeighborhoodMaxCriterion
::
insertAllQuads
(
const
GhostType
&
ghost_type
)
{
IntegrationPoint
q
;
q
.
ghost_type
=
ghost_type
;
Mesh
&
mesh
=
this
->
model
.
getMesh
();
for
(
auto
type
:
mesh
.
elementTypes
(
spatial_dimension
,
ghost_type
))
{
UInt
nb_element
=
mesh
.
getNbElement
(
type
,
ghost_type
);
UInt
nb_quad
=
this
->
model
.
getFEEngine
().
getNbIntegrationPoints
(
type
,
ghost_type
);
const
Array
<
Real
>
&
quads
=
this
->
quad_coordinates
(
type
,
ghost_type
);
q
.
type
=
type
;
auto
quad
=
quads
.
begin
(
spatial_dimension
);
for
(
UInt
e
=
0
;
e
<
nb_element
;
++
e
)
{
q
.
element
=
e
;
for
(
UInt
nq
=
0
;
nq
<
nb_quad
;
++
nq
)
{
q
.
num_point
=
nq
;
q
.
global_num
=
q
.
element
*
nb_quad
+
nq
;
spatial_grid
->
insert
(
q
,
*
quad
);
++
quad
;
}
}
}
}
/* -------------------------------------------------------------------------- */
void
NeighborhoodMaxCriterion
::
findMaxQuads
(
std
::
vector
<
IntegrationPoint
>
&
max_quads
)
{
AKANTU_DEBUG_IN
();
/// clear the element type maps
this
->
is_highest
.
clear
();
this
->
criterion
.
clear
();
/// update the values of the criterion
this
->
model
.
updateDataForNonLocalCriterion
(
criterion
);
/// start the exchange the value of the criterion on the ghost elements
this
->
model
.
asynchronousSynchronize
(
SynchronizationTag
::
_nh_criterion
);
/// compare to not-ghost neighbors
checkNeighbors
(
_not_ghost
);
/// finish the exchange
this
->
model
.
waitEndSynchronize
(
SynchronizationTag
::
_nh_criterion
);
/// compare to ghost neighbors
checkNeighbors
(
_ghost
);
/// extract the quads with highest criterion in their neighborhood
IntegrationPoint
quad
;
quad
.
ghost_type
=
_not_ghost
;
Mesh
&
mesh
=
this
->
model
.
getMesh
();
for
(
auto
type
:
mesh
.
elementTypes
(
spatial_dimension
,
_not_ghost
))
{
quad
.
type
=
type
;
UInt
nb_quadrature_points
=
this
->
model
.
getFEEngine
().
getNbIntegrationPoints
(
type
,
_not_ghost
);
/// loop over is_highest for the current element type
for
(
auto
data
:
enumerate
(
is_highest
(
type
,
_not_ghost
)))
{
const
auto
&
is_highest
=
std
::
get
<
1
>
(
data
);
if
(
is_highest
)
{
auto
q
=
std
::
get
<
0
>
(
data
);
/// gauss point has the highest stress in his neighbourhood
quad
.
element
=
q
/
nb_quadrature_points
;
quad
.
global_num
=
q
;
quad
.
num_point
=
q
%
nb_quadrature_points
;
max_quads
.
push_back
(
quad
);
}
}
}
AKANTU_DEBUG_OUT
();
}
/* -------------------------------------------------------------------------- */
void
NeighborhoodMaxCriterion
::
checkNeighbors
(
const
GhostType
&
ghost_type2
)
{
AKANTU_DEBUG_IN
();
// Compute the weights
for
(
auto
&
pair
:
pair_list
[
ghost_type2
])
{
const
auto
&
lq1
=
pair
.
first
;
const
auto
&
lq2
=
pair
.
second
;
Array
<
bool
>
&
has_highest_eq_stress_1
=
is_highest
(
lq1
.
type
,
lq1
.
ghost_type
);
const
Array
<
Real
>
&
criterion_1
=
this
->
criterion
(
lq1
.
type
,
lq1
.
ghost_type
);
const
Array
<
Real
>
&
criterion_2
=
this
->
criterion
(
lq2
.
type
,
lq2
.
ghost_type
);
if
(
criterion_1
(
lq1
.
global_num
)
<
criterion_2
(
lq2
.
global_num
))
has_highest_eq_stress_1
(
lq1
.
global_num
)
=
false
;
else
if
(
ghost_type2
!=
_ghost
)
{
Array
<
bool
>
&
has_highest_eq_stress_2
=
is_highest
(
lq2
.
type
,
lq2
.
ghost_type
);
has_highest_eq_stress_2
(
lq2
.
global_num
)
=
false
;
}
}
AKANTU_DEBUG_OUT
();
}
/* -------------------------------------------------------------------------- */
void
NeighborhoodMaxCriterion
::
cleanupExtraGhostElements
(
const
ElementTypeMap
<
UInt
>
&
nb_ghost_protected
)
{
Mesh
&
mesh
=
this
->
model
.
getMesh
();
/// create remove elements event
RemovedElementsEvent
remove_elem
(
mesh
);
/// create set of ghosts to keep
std
::
set
<
Element
>
relevant_ghost_elements
;
for
(
auto
&
pair
:
pair_list
[
_ghost
])
{
const
auto
&
q2
=
pair
.
second
;
relevant_ghost_elements
.
insert
(
q2
);
}
Array
<
Element
>
ghosts_to_erase
(
0
);
Element
element
;
element
.
ghost_type
=
_ghost
;
auto
end
=
relevant_ghost_elements
.
end
();
for
(
auto
&
type
:
mesh
.
elementTypes
(
spatial_dimension
,
_ghost
))
{
element
.
type
=
type
;
UInt
nb_ghost_elem
=
mesh
.
getNbElement
(
type
,
_ghost
);
UInt
nb_ghost_elem_protected
=
0
;
try
{
nb_ghost_elem_protected
=
nb_ghost_protected
(
type
,
_ghost
);
}
catch
(...)
{
}
if
(
!
remove_elem
.
getNewNumbering
().
exists
(
type
,
_ghost
))
remove_elem
.
getNewNumbering
().
alloc
(
nb_ghost_elem
,
1
,
type
,
_ghost
);
else
remove_elem
.
getNewNumbering
(
type
,
_ghost
).
resize
(
nb_ghost_elem
);
Array
<
UInt
>
&
new_numbering
=
remove_elem
.
getNewNumbering
(
type
,
_ghost
);
for
(
UInt
g
=
0
;
g
<
nb_ghost_elem
;
++
g
)
{
element
.
element
=
g
;
if
(
element
.
element
>=
nb_ghost_elem_protected
&&
relevant_ghost_elements
.
find
(
element
)
==
end
)
{
ghosts_to_erase
.
push_back
(
element
);
new_numbering
(
element
.
element
)
=
UInt
(
-
1
);
}
}
/// renumber remaining ghosts
UInt
ng
=
0
;
for
(
UInt
g
=
0
;
g
<
nb_ghost_elem
;
++
g
)
{
if
(
new_numbering
(
g
)
!=
UInt
(
-
1
))
{
new_numbering
(
g
)
=
ng
;
++
ng
;
}
}
}
mesh
.
sendEvent
(
remove_elem
);
this
->
onElementsRemoved
(
ghosts_to_erase
,
remove_elem
.
getNewNumbering
(),
remove_elem
);
}
}
// namespace akantu
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