Homec4science
Diffusion akantu (features/changes-to-address-joss-review) Browse

rAKA/src/fe_engine/shape_functions.cc
51dda7e0bc1dfeatures/changes-to…

Last Change
Raw File

shape_functions.cc
View Options

/**
* @file shape_functions.cc
*
* @author Nicolas Richart <nicolas.richart@epfl.ch>
*
* @date creation: Wed Aug 09 2017
* @date last modification: Wed Oct 11 2017
*
* @brief implementation of th shape functions interface
*
*
* Copyright (©) 2016-2018 EPFL (Ecole Polytechnique Fédérale de Lausanne)
* Laboratory (LSMS - Laboratoire de Simulation en Mécanique des Solides)
*
* Akantu is free software: you can redistribute it and/or modify it under the
* terms of the GNU Lesser General Public License as published by the Free
* Software Foundation, either version 3 of the License, or (at your option) any
* later version.
*
* Akantu is distributed in the hope that it will be useful, but WITHOUT ANY
* WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
* A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more
* details.
*
* You should have received a copy of the GNU Lesser General Public License
* along with Akantu. If not, see <http://www.gnu.org/licenses/>.
*
*/
/* -------------------------------------------------------------------------- */
#include "shape_functions.hh"
/* -------------------------------------------------------------------------- */
namespace akantu {
/* -------------------------------------------------------------------------- */
ShapeFunctions::ShapeFunctions(const Mesh & mesh, UInt spatial_dimension,
const ID & id, const MemoryID & memory_id)
: Memory(id, memory_id), shapes("shapes_generic", id, memory_id),
shapes_derivatives("shapes_derivatives_generic", id, memory_id),
mesh(mesh), _spatial_dimension(spatial_dimension) {}
/* -------------------------------------------------------------------------- */
template <ElementType type>
inline void
ShapeFunctions::initElementalFieldInterpolationFromIntegrationPoints(
const Array<Real> & interpolation_points_coordinates,
ElementTypeMapArray<Real> & interpolation_points_coordinates_matrices,
ElementTypeMapArray<Real> & quad_points_coordinates_inv_matrices,
const Array<Real> & quadrature_points_coordinates,
GhostType ghost_type, const Array<UInt> & element_filter) const {
AKANTU_DEBUG_IN();
UInt spatial_dimension = this->mesh.getSpatialDimension();
UInt nb_element = this->mesh.getNbElement(type, ghost_type);
UInt nb_element_filter;
if (element_filter == empty_filter) {
nb_element_filter = nb_element;
} else {
nb_element_filter = element_filter.size();
}
UInt nb_quad_per_element =
GaussIntegrationElement<type>::getNbQuadraturePoints();
UInt nb_interpolation_points_per_elem =
interpolation_points_coordinates.size() / nb_element;
AKANTU_DEBUG_ASSERT(interpolation_points_coordinates.size() % nb_element == 0,
"Number of interpolation points should be a multiple of "
"total number of elements");
if (!quad_points_coordinates_inv_matrices.exists(type, ghost_type)) {
quad_points_coordinates_inv_matrices.alloc(
nb_element_filter, nb_quad_per_element * nb_quad_per_element, type,
ghost_type);
} else {
quad_points_coordinates_inv_matrices(type, ghost_type)
.resize(nb_element_filter);
}
if (!interpolation_points_coordinates_matrices.exists(type, ghost_type)) {
interpolation_points_coordinates_matrices.alloc(
nb_element_filter,
nb_interpolation_points_per_elem * nb_quad_per_element, type,
ghost_type);
} else {
interpolation_points_coordinates_matrices(type, ghost_type)
.resize(nb_element_filter);
}
Array<Real> & quad_inv_mat =
quad_points_coordinates_inv_matrices(type, ghost_type);
Array<Real> & interp_points_mat =
interpolation_points_coordinates_matrices(type, ghost_type);
Matrix<Real> quad_coord_matrix(nb_quad_per_element, nb_quad_per_element);
Array<Real>::const_matrix_iterator quad_coords_it =
quadrature_points_coordinates.begin_reinterpret(
spatial_dimension, nb_quad_per_element, nb_element_filter);
Array<Real>::const_matrix_iterator points_coords_begin =
interpolation_points_coordinates.begin_reinterpret(
spatial_dimension, nb_interpolation_points_per_elem, nb_element);
Array<Real>::matrix_iterator inv_quad_coord_it =
quad_inv_mat.begin(nb_quad_per_element, nb_quad_per_element);
Array<Real>::matrix_iterator int_points_mat_it = interp_points_mat.begin(
nb_interpolation_points_per_elem, nb_quad_per_element);
/// loop over the elements of the current material and element type
for (UInt el = 0; el < nb_element_filter;
++el, ++inv_quad_coord_it, ++int_points_mat_it, ++quad_coords_it) {
/// matrix containing the quadrature points coordinates
const Matrix<Real> & quad_coords = *quad_coords_it;
/// matrix to store the matrix inversion result
Matrix<Real> & inv_quad_coord_matrix = *inv_quad_coord_it;
/// insert the quad coordinates in a matrix compatible with the
/// interpolation
buildElementalFieldInterpolationMatrix<type>(quad_coords,
quad_coord_matrix);
/// invert the interpolation matrix
inv_quad_coord_matrix.inverse(quad_coord_matrix);
/// matrix containing the interpolation points coordinates
const Matrix<Real> & points_coords =
points_coords_begin[element_filter(el)];
/// matrix to store the interpolation points coordinates
/// compatible with these functions
Matrix<Real> & inv_points_coord_matrix = *int_points_mat_it;
/// insert the quad coordinates in a matrix compatible with the
/// interpolation
buildElementalFieldInterpolationMatrix<type>(points_coords,
inv_points_coord_matrix);
}
AKANTU_DEBUG_OUT();
}
/* -------------------------------------------------------------------------- */
void ShapeFunctions::initElementalFieldInterpolationFromIntegrationPoints(
const ElementTypeMapArray<Real> & interpolation_points_coordinates,
ElementTypeMapArray<Real> & interpolation_points_coordinates_matrices,
ElementTypeMapArray<Real> & quad_points_coordinates_inv_matrices,
const ElementTypeMapArray<Real> & quadrature_points_coordinates,
const ElementTypeMapArray<UInt> * element_filter) const {
AKANTU_DEBUG_IN();
UInt spatial_dimension = this->mesh.getSpatialDimension();
for (auto ghost_type : ghost_types) {
auto types_iterable = mesh.elementTypes(spatial_dimension, ghost_type);
if (element_filter != nullptr) {
types_iterable =
element_filter->elementTypes(spatial_dimension, ghost_type);
}
for (auto type : types_iterable) {
UInt nb_element = mesh.getNbElement(type, ghost_type);
if (nb_element == 0) {
continue;
}
const Array<UInt> * elem_filter;
if (element_filter != nullptr) {
elem_filter = &((*element_filter)(type, ghost_type));
} else {
elem_filter = &(empty_filter);
}
#define AKANTU_INIT_ELEMENTAL_FIELD_INTERPOLATION_FROM_C_POINTS(type) \
this->initElementalFieldInterpolationFromIntegrationPoints<type>( \
interpolation_points_coordinates(type, ghost_type), \
interpolation_points_coordinates_matrices, \
quad_points_coordinates_inv_matrices, \
quadrature_points_coordinates(type, ghost_type), ghost_type, \
*elem_filter)
AKANTU_BOOST_REGULAR_ELEMENT_SWITCH(
AKANTU_INIT_ELEMENTAL_FIELD_INTERPOLATION_FROM_C_POINTS);
#undef AKANTU_INIT_ELEMENTAL_FIELD_INTERPOLATION_FROM_C_POINTS
}
}
AKANTU_DEBUG_OUT();
}
/* -------------------------------------------------------------------------- */
void ShapeFunctions::interpolateElementalFieldFromIntegrationPoints(
const ElementTypeMapArray<Real> & field,
const ElementTypeMapArray<Real> & interpolation_points_coordinates_matrices,
const ElementTypeMapArray<Real> & quad_points_coordinates_inv_matrices,
ElementTypeMapArray<Real> & result, GhostType ghost_type,
const ElementTypeMapArray<UInt> * element_filter) const {
AKANTU_DEBUG_IN();
UInt spatial_dimension = this->mesh.getSpatialDimension();
auto types_iterable = mesh.elementTypes(spatial_dimension, ghost_type);
if (element_filter != nullptr) {
types_iterable =
element_filter->elementTypes(spatial_dimension, ghost_type);
}
for (auto type : types_iterable) {
UInt nb_element = mesh.getNbElement(type, ghost_type);
if (nb_element == 0) {
continue;
}
const Array<UInt> * elem_filter;
if (element_filter != nullptr) {
elem_filter = &((*element_filter)(type, ghost_type));
} else {
elem_filter = &(empty_filter);
}
#define AKANTU_INTERPOLATE_ELEMENTAL_FIELD_FROM_C_POINTS(type) \
interpolateElementalFieldFromIntegrationPoints<type>( \
field(type, ghost_type), \
interpolation_points_coordinates_matrices(type, ghost_type), \
quad_points_coordinates_inv_matrices(type, ghost_type), result, \
ghost_type, *elem_filter)
AKANTU_BOOST_REGULAR_ELEMENT_SWITCH(
AKANTU_INTERPOLATE_ELEMENTAL_FIELD_FROM_C_POINTS);
#undef AKANTU_INTERPOLATE_ELEMENTAL_FIELD_FROM_C_POINTS
}
AKANTU_DEBUG_OUT();
}
} // namespace akantu
c4science · Help