Diffusion akantu (features/cohesive_clusters) Browse

cohesive_clust…

akantu_test_driver.sh
View Options

			#!/bin/bash

			set -o errexit
			set -o pipefail

			show_help() {
			cat << EOF
			Usage: ${0##*/} -n NAME -e EXECUTABLE [-p MPI_WRAPPER] [-s SCRIPT_FILE]
			[-r REFERENCE_FILE] [-w WORKING_DIR]
			Execute the test in the good configuration according to the options given

			-e EXECUTABLE Main executable of the test
			-n NAME Name of the test
			-p MPI_WRAPPER Executes the test for multiple parallel configuration
			-s SCRIPT_FILE Script to execute after the execution of the test to
			postprocess the results
			-r REFERENCE_FILE Reference file to compare with if the name of the file
			contains a <nb_proc> this will be used for the different
			configuration when -p is given
			-w WORKING_DIR The directory in which to execute the test
			-E ENVIRONMENT_FILE File to source before running tests
			-h Print this helps
			EOF
			}

			full_redirect() {
			local nproc=$1
			shift
			local name=$1
			shift

			local sout=".lastout"
			local serr=".lasterr"
			if [ ${nproc} -ne 0 ]; then
			sout="-${nproc}${sout}"
			serr="-${nproc}${serr}"
			fi
			echo "Run $*"
			(($* \| tee "${name}${sout}") 3>&1 1>&2 2>&3 \| tee "${name}${serr}") 3>&1 1>&2 2>&3

			lastout="${name}${sout}"
			}

			name=
			executable=
			parallel=
			postprocess_script=
			reference=
			working_dir=
			envi=
			parallel_processes="2"

			while getopts ":n:e:E:p:N:s:r:w:h" opt; do
			case "$opt" in
			n) name="$OPTARG"
			;;
			e) executable="$OPTARG"
			;;
			p) parallel="$OPTARG"
			;;
			N) parallel_processes="$OPTARG"
			;;
			s) postprocess_script="$OPTARG"
			;;
			r) reference="$OPTARG"
			;;
			w) working_dir="$OPTARG"
			;;
			E) envi="$OPTARG"
			;;
			h)
			show_help
			exit 0
			;;
			\?)
			echo "Invalid option: -$OPTARG" >&2
			show_help
			exit 1
			;;
			:)
			echo "Option -$OPTARG requires an argument." >&2
			show_help
			exit 1
			;;
			esac
			done

			if [ -n "${envi}" ]; then
			source ${envi}
			fi

			if [ -z "${name}" -o -z "${executable}" ]; then
			echo "Missing executable or name"
			show_help
			exit 1
			fi

			if [ -n "${working_dir}" ]; then
			current_directory=$PWD
			echo "Entering directory ${working_dir}"
			cd "${working_dir}"
			fi

			if [ -z "${parallel}" ]; then
			echo "Executing the test ${name}"
			full_redirect 0 ${name} "./${executable}"
			else
			#for i in ${parallel_processes}; do
			i=${parallel_processes}
			echo "Executing the test ${name} for ${i} procs"
			full_redirect $i ${name}_$i "${parallel} ${i} ./${executable}"
			#done
			fi

			if [ -n "${postprocess_script}" ]; then
			echo "Executing the test ${name} post-processing"
			full_redirect 0 ${name}_pp ./${postprocess_script}
			fi

			if [ -n "${reference}" ]; then
			echo "Comparing last generated output to the reference file"
			diff ${lastout} ${reference}
			fi

rAKA/cmake/akantu_test_driver.sh866bdf7258f0features/cohesive_clust…

akantu_test_driver.shView Options

rAKA/cmake/akantu_test_driver.sh
866bdf7258f0features/cohesive_clust…

akantu_test_driver.sh
View Options