cohesive_clust…

setup.py.in
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			#!/usr/bin/env python
			# -- coding:utf-8 --

			from setuptools import setup, find_packages, Extension


			name = 'Akantu'
			version = '4.0.0'

			aka_inc_dirs = "@AKANTU_LIBRARY_INCLUDE_DIRS@".split(';')
			aka_inc_dirs += "@AKANTU_PRIVATE_EXTERNAL_INCLUDE_DIR@".split(';')
			aka_inc_dirs += "@AKANTU_INTERFACE_EXTERNAL_INCLUDE_DIR@".split(';')
			aka_inc_dirs.append(
			"@PROJECT_SOURCE_DIR@/third-party/akantu_iterators/include")
			aka_inc_dirs.append(
			"@PROJECT_BINARY_DIR@/src")
			aka_inc_dirs.append('@PROJECT_SOURCE_DIR@/python')
			aka_inc_dirs += '@PYBIND11_INCLUDE_DIR@'.split(';')


			pybind_extension = Extension(
			"py11_akantu",
			["@PROJECT_SOURCE_DIR@/python/py_aka_common.cc",
			"@PROJECT_SOURCE_DIR@/python/py_aka_error.cc",
			"@PROJECT_SOURCE_DIR@/python/py_akantu.cc",
			"@PROJECT_SOURCE_DIR@/python/py_boundary_conditions.cc",
			"@PROJECT_SOURCE_DIR@/python/py_fe_engine.cc",
			"@PROJECT_SOURCE_DIR@/python/py_group_manager.cc",
			"@PROJECT_SOURCE_DIR@/python/py_mesh.cc",
			"@PROJECT_SOURCE_DIR@/python/py_model.cc",
			"@PROJECT_SOURCE_DIR@/python/py_parser.cc"],
			version=version,
			extra_compile_args=['-std=c++17'],
			libraries=['akantu'],
			library_dirs=["@PROJECT_BINARY_DIR@/src/"],
			# '-g', '-fno-omit-frame-pointer'], # , '-O0'],
			include_dirs=aka_inc_dirs
			)


			setup(name=name,
			packages=find_packages(),
			version="0.0.0",
			author="Guillaume Anciaux",
			author_email="guillaume.anciaux@epfl.ch",
			description=("Akantu: Swiss-Made Open-Source Finite-Element Library"),
			license="GPL",
			tests_require=["pytest"],
			install_requires=['numpy'],
			ext_modules=[pybind_extension],
			)