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__init__.py
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Created
Sun, Nov 10, 03:38
Size
1 KB
Mime Type
text/x-python
Expires
Tue, Nov 12, 03:38 (2 d)
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blob
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21946518
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rAKA akantu
__init__.py
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import
scipy.sparse
as
_aka_sparse
import
numpy
as
_aka_np
import
py11_akantu
private_keys
=
set
(
dir
(
py11_akantu
))
-
set
(
dir
())
for
k
in
private_keys
:
globals
()[
k
]
=
getattr
(
py11_akantu
,
k
)
if
py11_akantu
.
has_mpi
():
try
:
from
mpi4py
import
MPI
# noqa: F401
except
Exception
:
pass
def
initialize
(
*
args
,
**
kwargs
):
raise
RuntimeError
(
"No need to call initialize,"
" use parseInput to read an input file"
)
def
finalize
(
*
args
,
**
kwargs
):
raise
RuntimeError
(
"No need to call finalize"
)
class
AkantuSparseMatrix
(
_aka_sparse
.
coo_matrix
):
def
__init__
(
self
,
aka_sparse
):
self
.
aka_sparse
=
aka_sparse
matrix_type
=
self
.
aka_sparse
.
getMatrixType
()
sz
=
self
.
aka_sparse
.
size
()
row
=
self
.
aka_sparse
.
getIRN
()[:,
0
]
-
1
col
=
self
.
aka_sparse
.
getJCN
()[:,
0
]
-
1
data
=
self
.
aka_sparse
.
getA
()[:,
0
]
row
=
row
.
copy
()
col
=
col
.
copy
()
data
=
data
.
copy
()
if
matrix_type
==
py11_akantu
.
_symmetric
:
non_diags
=
(
row
!=
col
)
row_sup
=
col
[
non_diags
]
col_sup
=
row
[
non_diags
]
data_sup
=
data
[
non_diags
]
col
=
_aka_np
.
concatenate
((
col
,
col_sup
))
row
=
_aka_np
.
concatenate
((
row
,
row_sup
))
data
=
_aka_np
.
concatenate
((
data
,
data_sup
))
_aka_sparse
.
coo_matrix
.
__init__
(
self
,
(
data
,
(
row
,
col
)),
shape
=
(
sz
,
sz
))
FromStress
=
py11_akantu
.
FromHigherDim
FromTraction
=
py11_akantu
.
FromSameDim
py11_akantu
.
__initialize
()
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