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rAKA/test/test_model/patch_tests/patch_test_linear_solid_mechanics_fixture.py
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patch_test_linear_solid_mechanics_fixture.py
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#!/usr/bin/env python3
"""patch_test_linear_solid_mechanics_fixture.py: solid mechanics model patch
test in python
"""
__author__ = "Guillaume Anciaux"
__credits__ = [
"Guillaume Anciaux <guillaume.anciaux@epfl.ch>",
]
__copyright__ = "Copyright (©) 2016-2021 EPFL (Ecole Polytechnique Fédérale" \
" de Lausanne) Laboratory (LSMS - Laboratoire de Simulation" \
" en Mécanique des Solides)"
__license__ = "LGPLv3"
import patch_test_linear_fixture
import numpy as np
import akantu
# custom material (this patch test also checks for custom material features)
class LocalElastic(akantu.Material):
def __init__(self, model, _id):
super().__init__(model, _id)
super().registerParamReal('E',
akantu._pat_readable | akantu._pat_parsable,
'Youngs modulus')
super().registerParamReal('nu',
akantu._pat_readable | akantu._pat_parsable,
'Poisson ratio')
# declares all the internals
def initMaterial(self, internals, params):
nu = self.getReal('nu')
E = self.getReal('E')
self.mu = E / (2 * (1 + nu))
self.lame_lambda = nu * E / (
(1. + nu) * (1. - 2. * nu))
# Second Lame coefficient (shear modulus)
self.lame_mu = E / (2. * (1. + nu))
super().initMaterial()
# declares all the parameters that are needed
def getPushWaveSpeed(self, element):
rho = self.getReal('rho')
return np.sqrt((self.lame_lambda + 2 * self.lame_mu) / rho)
# compute small deformation tensor
@staticmethod
def computeEpsilon(grad_u):
return 0.5 * (grad_u + np.einsum('aij->aji', grad_u))
# constitutive law
def computeStress(self, el_type, ghost_type):
grad_u = self.getGradU(el_type, ghost_type)
sigma = self.getStress(el_type, ghost_type)
n_quads = grad_u.shape[0]
grad_u = grad_u.reshape((n_quads, 2, 2))
epsilon = self.computeEpsilon(grad_u)
sigma = sigma.reshape((n_quads, 2, 2))
trace = np.einsum('aii->a', grad_u)
sigma[:, :, :] = (
np.einsum('a,ij->aij', trace,
self.lame_lambda * np.eye(2))
+ 2. * self.lame_mu * epsilon)
# constitutive law tangent modulii
def computeTangentModuli(self, el_type, tangent_matrix, ghost_type):
n_quads = tangent_matrix.shape[0]
tangent = tangent_matrix.reshape(n_quads, 3, 3)
Miiii = self.lame_lambda + 2 * self.lame_mu
Miijj = self.lame_lambda
Mijij = self.lame_mu
tangent[:, 0, 0] = Miiii
tangent[:, 1, 1] = Miiii
tangent[:, 0, 1] = Miijj
tangent[:, 1, 0] = Miijj
tangent[:, 2, 2] = Mijij
# computes the energy density
def computePotentialEnergy(self, el_type):
sigma = self.getStress(el_type)
grad_u = self.getGradU(el_type)
nquads = sigma.shape[0]
stress = sigma.reshape(nquads, 2, 2)
grad_u = grad_u.reshape((nquads, 2, 2))
epsilon = self.computeEpsilon(grad_u)
energy_density = self.getPotentialEnergy(el_type)
energy_density[:, 0] = 0.5 * np.einsum('aij,aij->a', stress, epsilon)
class TestPatchTestSMMLinear(patch_test_linear_fixture.TestPatchTestLinear):
plane_strain = True
model_type = akantu.SolidMechanicsModel
def __init__(self, *args, **kwargs):
super().__init__(*args, **kwargs)
def initModel(self, method, material_file):
# mat.__dict__['dim'] = self.dim
super().initModel(method, material_file)
def applyBC(self):
super().applyBC()
displacement = self.model.getDisplacement()
self.applyBConDOFs(displacement)
def checkAll(self):
displacement = self.model.getDisplacement()
mat = self.model.getMaterial(0)
self.checkDOFs(displacement)
self.checkGradient(mat.getGradU(self.elem_type), displacement)
def foo(pstrain):
nu = self.model.getMaterial(0).getReal("nu")
E = self.model.getMaterial(0).getReal("E")
strain = (pstrain + pstrain.transpose()) / 2.
trace = strain.trace()
_lambda = nu * E / ((1 + nu) * (1 - 2 * nu))
mu = E / (2 * (1 + nu))
if (not self.plane_strain):
_lambda = nu * E / (1 - nu * nu)
stress = np.zeros((self.dim, self.dim))
if self.dim == 1:
stress[0, 0] = E * strain[0, 0]
else:
stress[:, :] = (
_lambda * trace * np.eye(self.dim) + 2 * mu * strain)
return stress
self.checkResults(foo,
mat.getStress(self.elem_type),
displacement)
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