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DynamicsDiagonal.rst
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****************************
GooseFEM::Dynamics::Diagonal
****************************
.. note::
Source:
.. code-block:: cpp
#include <GooseFEM/DynamicsDiagonalPeriodic.h>
#include <GooseFEM/DynamicsDiagonalSemiPeriodic.h>
#include <GooseFEM/DynamicsDiagonalLinearStrainQuad4.h>
Overview
========
Principle
---------
The philosophy is to provide some structure to efficiently run a finite element simulation which remains customizable. Even more customization can be obtained by copy/pasting the source and modifying it to your need. The idea that is followed involves a hierarchy of three classes, whereby a class that is higher in hierarchy writes to some field of the class that is lower in hierarchy, runs a function, and reads from some field. In general:
* **Discretized system** (``GooseFEM::Dynamics::Diagonal::Periodic``, ``GooseFEM::Dynamics::Diagonal::SemiPeriodic``).
Defines the discretized system, and assembles the (inverse) mass matrix, the displacement dependent forces, and the velocity dependent forces from element arrays that are provided by the element definition.
* **Element definition** (``GooseFEM::Dynamics::Diagonal::LinearStrain::Qaud4``)
Provides the element arrays by performing numerical quadrature. At the integration point the constitutive response is probed from the quadrature point definition.
* **Quadrature point definition**
This class is not provided, and should be provided by the user.
Example
-------
A simple example is:
[:download:`source: examples/DynamicsDiagonalPeriodic/laminate/no_damping/Verlet/main.cpp <examples/DynamicsDiagonalPeriodic/laminate/no_damping/Verlet/main.cpp>`]
.. code-block:: cpp
#include <Eigen/Eigen>
#include <cppmat/cppmat.h>
#include <GooseFEM/GooseFEM.h>
#include <GooseMaterial/AmorphousSolid/LinearStrain/Elastic/Cartesian2d.h>
// -------------------------------------------------------------------
using MatS = GooseFEM::MatS;
using MatD = GooseFEM::MatD;
using ColD = GooseFEM::ColD;
using T2 = cppmat::cartesian2d::tensor2 <double>;
using T2s = cppmat::cartesian2d::tensor2s<double>;
namespace GM = GooseMaterial::AmorphousSolid::LinearStrain::Elastic::Cartesian2d;
// ===================================================================
class Quadrature
{
public:
T2s eps, epsdot, sig;
size_t nhard;
GM::Material hard, soft;
double Ebar, Vbar;
Quadrature(size_t nhard);
double density (size_t elem, size_t k, double V);
void stressStrain (size_t elem, size_t k, double V);
void stressStrainRate (size_t elem, size_t k, double V);
void stressStrainPost (size_t elem, size_t k, double V);
void stressStrainRatePost(size_t elem, size_t k, double V);
};
// -------------------------------------------------------------------
Quadrature::Quadrature(size_t _nhard)
{
nhard = _nhard;
hard = GM::Material(100.,10.);
soft = GM::Material(100., 1.);
}
// -------------------------------------------------------------------
double Quadrature::density(size_t elem, size_t k, double V)
{
return 1.0;
}
// -------------------------------------------------------------------
void Quadrature::stressStrain(size_t elem, size_t k, double V)
{
if ( elem < nhard ) sig = hard.stress(eps);
else sig = soft.stress(eps);
}
// -------------------------------------------------------------------
void Quadrature::stressStrainRate(size_t elem, size_t k, double V)
{
}
// -------------------------------------------------------------------
void Quadrature::stressStrainPost(size_t elem, size_t k, double V)
{
Vbar += V;
if ( elem < nhard ) Ebar += hard.energy(eps) * V;
else Ebar += soft.energy(eps) * V;
}
// -------------------------------------------------------------------
void Quadrature::stressStrainRatePost(size_t elem, size_t k, double V)
{
}
// ===================================================================
int main()
{
// class which provides the mesh
GooseFEM::Mesh::Quad4::Regular mesh(40,40,1.);
// class which provides the constitutive response at each quadrature point
auto quadrature = std::make_shared<Quadrature>(40*40/4);
// class which provides the response of each element
using Elem = GooseFEM::Dynamics::Diagonal::LinearStrain::Quad4<Quadrature>;
auto elem = std::make_shared<Elem>(quadrature);
// class which provides the system and an increment
GooseFEM::Dynamics::Diagonal::Periodic<Elem> sim(
elem,
mesh.coor(),
mesh.conn(),
mesh.dofsPeriodic(),
1.e-2,
0.0
);
// loop over increments
for ( ... )
{
// - set displacement of fixed DOFs
...
// - compute time increment
sim.Verlet();
// - post-process
quadrature->Ebar = 0.0;
quadrature->Vbar = 0.0;
sim.post();
...
}
return 0;
}
Pseudo-code
-----------
What is happening inside ``Verlet`` is evaluating the forces (and the mass matrix), and updating the displacements by solving the system. In pseudo-code:
* Mass matrix:
.. code-block:: python
sim.computeMinv():
{
for e in elements:
sim->elem->xe(i,j) = ...
sim->elem->ue(i,j) = ...
sim->elem->computeM(e):
{
for k in integration-points:
sim->elem->M(...,...) += ... * sim->elem->quad->density(e,k,V)
}
M(...) += sim->elem->M(i,i)
}
* Displacement dependent force:
.. code-block:: python
sim.computeFu():
{
for e in elements:
sim->elem->xe(i,j) = ...
sim->elem->ue(i,j) = ...
sim->elem->computeFu(e):
{
for k in integration-points:
sim->elem->quad->eps(i,j) = ...
sim->elem->quad->stressStrain(e,k,V)
sim->elem->fu(...) += ... * sim->elem->quad->sig(i,j)
}
Fu(...) += sim->elem->fu(i)
}
* Velocity dependent force:
.. code-block:: python
sim.computeFv():
{
for e in elements:
sim->elem->xe(i,j) = ...
sim->elem->ue(i,j) = ...
sim->elem->ve(i,j) = ...
sim->elem->computeFv(e):
{
for k in integration-points:
sim->elem->quad->epsdot(i,j) = ...
sim->elem->quad->stressStrainRate(e,k,V)
sim->elem->fv(...) += ... * sim->elem->quad->sig(i,j)
}
Fv(...) += sim->elem->fu(i)
}
Signature
---------
From this it is clear that:
* ``GooseFEM::Dynamics::Diagonal::Periodic`` requires the following minimal signature from ``GooseFEM::Dynamics::Diagonal::LinearStrain::Qaud4``:
.. code-block:: cpp
class Element
{
public:
matrix M; // should have operator(i,j)
column fu, fv; // should have operator(i)
matrix xe, ue, ve; // should have operator(i,j)
void computeM (size_t elem); // mass matrix <- quad->density
void computeFu(size_t elem); // displacement dependent forces <- quad->stressStrain
void computeFv(size_t elem); // displacement dependent forces <- quad->stressStrainRate
void post (size_t elem); // post-process <- quad->stressStrain(Rate)
}
* ``GooseFEM::Dynamics::Diagonal::LinearStrain::Qaud4`` requires the minimal signature from ``Quadrature``
.. code-block:: cpp
class Quadrature
{
public:
tensor eps, epsdot, sig; // should have operator(i,j)
double density (size_t elem, size_t k, double V);
void stressStrain (size_t elem, size_t k, double V);
void stressStrainRate (size_t elem, size_t k, double V);
void stressStrainPost (size_t elem, size_t k, double V);
void stressStrainRatePost(size_t elem, size_t k, double V);
}

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