Diffusion Instrument Control (confint-fix) Browse

createGui.m
86613780ea80confint-fix

createGui.m
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			function createGui(this, varargin)

			p=inputParser();

			%Parameter that tells the function if save panel should be created
			addParameter(p,'save_panel',true,@islogical);
			parse(p,varargin{:});
			enable_save_panel=p.Results.save_panel;

			if ~isempty(this.fit_name)

			%Makes the fit name have the first letter capitalized
			fit_name=[upper(this.fit_name(1)),this.fit_name(2:end)];
			else
			fit_name='';
			end

			%% Calculate the dimensions of GUI panels

			%Defines the colors for the Gui
			rgb_blue=[0.1843,0.4157,1];
			rgb_white=[1,1,1];

			%Width of the edit boxes in the GUI
			edit_width=140;

			%Height of buttons in GUI
			button_h=25;

			%Minimum height of the hboxes composing the gui.
			title_h=40;
			equation_h=100;
			fitbox_h=3*button_h;
			savebox_h=100; %Only relevant when save_panel input argument is true
			slider_h=130;

			min_fig_width=560;

			%Finds the height in button heights of the user field panel. This
			%is used to calculate the height of the figure.
			n_user_pars = length(fieldnames(this.UserParamList));
			if n_user_pars>0
			userpanel_h = button_h*(n_user_pars+1);
			else
			% Skip the user panel completely
			userpanel_h = 0;
			end

			if enable_save_panel
			fig_h=title_h+equation_h+fitbox_h+slider_h+savebox_h+userpanel_h;
			else
			fig_h=title_h+equation_h+fitbox_h+slider_h+userpanel_h;
			end

			%Sets a minimum width
			if this.n_params < 4
			if this.n_params ~= 0
			edit_width=min_fig_width/this.n_params;
			else

			% Support the case of dummy fit with no parameters
			edit_width=min_fig_width;
			end
			end
			fig_width=edit_width*this.n_params;

			%% Create GUI elements

			%Name sets the title of the window, NumberTitle turns off the FigureN text
			%that would otherwise be before the title, MenuBar is the menu normally on
			%the figure, toolbar is the toolbar normally on the figure.
			%HandleVisibility refers to whether gcf, gca etc will grab this figure.
			this.Gui.Window = figure('Name', class(this), 'NumberTitle', 'off', ...
			'MenuBar', 'none', 'Toolbar', 'none', 'HandleVisibility', 'off',...
			'Units','Pixels','Position',[100,100,fig_width,fig_h]);

			%Place the figure in the center of the screen
			centerFigure(this.Gui.Window);

			%Sets the close function (runs when x is pressed) to be class function
			set(this.Gui.Window, 'CloseRequestFcn', @this.closeFigureCallback);

			%The main vertical box. The four main panes of the GUI are stacked in the
			%box. We create these four boxes first so that we do not need to redraw
			%them later
			this.Gui.MainVbox=uix.VBox('Parent',this.Gui.Window, ...
			'BackgroundColor',rgb_white);

			%The title box
			this.Gui.Title=annotation(this.Gui.MainVbox,'textbox',[0.5,0.5,0.3,0.3],...
			'String',fit_name,'Units','Normalized',...
			'HorizontalAlignment','center','VerticalAlignment','middle',...
			'FontSize',16,'BackgroundColor',rgb_white);

			%Displays the fitted equation
			this.Gui.Equation=annotation(this.Gui.MainVbox,'textbox',[0.5,0.5,0.3,0.3],...
			'String',this.fit_tex,...
			'Units','Normalized','Interpreter','LaTeX',...
			'HorizontalAlignment','center','VerticalAlignment','middle',...
			'FontSize',20,'BackgroundColor',rgb_white);

			%Creates an HBox for the buttons providing basic fit functionality
			this.Gui.FitHbox=uix.HBox('Parent',this.Gui.MainVbox,...
			'BackgroundColor',rgb_white);

			if ~isempty(fieldnames(this.UserParamList))
			%Creates an HBox for extracted parameters and user interactions with GUI
			this.Gui.UserHbox=uix.HBox('Parent',this.Gui.MainVbox,...
			'BackgroundColor',rgb_white);
			end

			%Sets the heights and minimum heights of the five vertical boxes. -1 means
			%it resizes with the window
			if enable_save_panel
			%Creates the HBox for saving parameters
			this.Gui.SaveHbox=uix.HBox('Parent', this.Gui.MainVbox,...
			'BackgroundColor',rgb_white);
			end

			%Creates the HBox for the fitting parameters
			this.Gui.SliderHbox=uix.HBox('Parent',this.Gui.MainVbox, ...
			'BackgroundColor',rgb_white);

			% Set the hights of the main box elements
			% -1 stands for the element that is resized with the window
			h_list = [title_h,-1,fitbox_h,slider_h];
			min_h_list = [title_h,equation_h,fitbox_h,slider_h];

			if ~isempty(fieldnames(this.UserParamList))
			% Add space for the panel with user parameters
			h_list = [h_list(1:end-1), userpanel_h, h_list(end)];
			min_h_list = [min_h_list(1:end-1), userpanel_h, min_h_list(end)];
			end

			if enable_save_panel
			% Add space for the save panel
			h_list = [h_list(1:end-1), savebox_h, h_list(end)];
			min_h_list = [min_h_list(1:end-1), savebox_h, min_h_list(end)];
			end

			set(this.Gui.MainVbox, 'Heights', h_list, 'MinimumHeights', min_h_list);

			%Here we create the fit panel in the GUI.
			this.Gui.FitPanel=uix.BoxPanel('Parent', this.Gui.FitHbox,...
			'Padding',0,'BackgroundColor', rgb_white,...
			'Title','Fit Panel','TitleColor',rgb_blue);
			this.Gui.FitInnerHbox = uix.HBox('Parent', this.Gui.FitPanel, ...
			'BackgroundColor', rgb_white);
			this.Gui.FitVbox1 = uix.VBox('Parent', this.Gui.FitInnerHbox, ...
			'BackgroundColor', rgb_white);
			this.Gui.FitVbox2 = uix.VBox('Parent', this.Gui.FitInnerHbox, ...
			'BackgroundColor', rgb_white);
			this.Gui.FitVbox3 = uix.VBox('Parent', this.Gui.FitInnerHbox, ...
			'BackgroundColor', rgb_white);

			%Creates the button for analysis inside the VBox
			this.Gui.AnalyzeButton=uicontrol('Parent',this.Gui.FitVbox1,...
			'style','pushbutton','Background','w','String','Analyze', ...
			'Callback', @this.analyzeCallback);
			%Creates button for generating new initial parameters
			this.Gui.InitButton=uicontrol('Parent',this.Gui.FitVbox1,...
			'style','pushbutton','Background','w',...
			'String','Generate initial parameters', ...
			'Callback', @this.initParamCallback);
			%Creates button for clearing fits
			this.Gui.ClearButton=uicontrol('Parent',this.Gui.FitVbox2,...
			'style','pushbutton','Background','w','String','Clear fit', ...
			'Callback', @this.clearFitCallback);
			%Button for triggering NewAcceptedFit event
			this.Gui.AcceptFitButton=uicontrol('Parent',this.Gui.FitVbox2,...
			'style','pushbutton','Background','w','String','Accept fit', ...
			'Callback', @this.acceptFitCallback);
			%Checkbox for enabling cursors
			this.Gui.CursorsCheckbox=uicontrol('Parent',this.Gui.FitVbox3,...
			'style','checkbox','Background','w', ...
			'String', 'Range selection cursors', ...
			'Units', 'normalized', ...
			'Position', [0.5,0.05,0.3,0.3], ...
			'Callback', @this.enableCursorsCallback);
			%Button for centering the range selection cursors
			this.Gui.CenterCursorsButton=uicontrol('Parent',this.Gui.FitVbox3,...
			'style','pushbutton','Background','w','String','Center cursors', ...
			'Enable', 'off', 'Callback', @(~,~)centerCursors(this));

			set(this.Gui.FitVbox1,...
			'Heights', button_h*ones(1,length(this.Gui.FitVbox1.Children)));
			set(this.Gui.FitVbox2,...
			'Heights', button_h*ones(1,length(this.Gui.FitVbox2.Children)));
			set(this.Gui.FitVbox3,...
			'Heights', button_h*ones(1,length(this.Gui.FitVbox3.Children)));

			if ~isempty(fieldnames(this.UserParamList))
			%Here we create the panel for the user parameters
			this.Gui.UserPanel=uix.BoxPanel( 'Parent', this.Gui.UserHbox,...
			'Padding',0,'BackgroundColor', 'w',...
			'Title','Calculated parameters','TitleColor',rgb_blue);

			%Fill the user panel with controls
			createUserControls(this, 'field_hight', button_h, ...
			'background_color', 'w');
			end

			if enable_save_panel
			%This creates the boxes for saving files and for specifying file saving
			%properties
			this.Gui.SavePanel=uix.BoxPanel( 'Parent', this.Gui.SaveHbox,...
			'Padding',0,'BackgroundColor', rgb_white,...
			'Title','Save Panel','TitleColor',rgb_blue);
			this.Gui.DirPanel=uix.BoxPanel('Parent',this.Gui.SaveHbox,...
			'Padding',0,'BackgroundColor',rgb_white,...
			'Title','Directory Panel','TitleColor',rgb_blue);

			set(this.Gui.SaveHbox,'Widths',[-1,-2],'MinimumWidths',[0,375]);

			%Here we create the buttons and edit boxes inside the save box
			this.Gui.SaveButtonBox=uix.VBox('Parent',this.Gui.SavePanel,...
			'BackgroundColor',rgb_white);
			this.Gui.DirHbox=uix.HBox('Parent',this.Gui.DirPanel,...
			'BackgroundColor',rgb_white);
			this.Gui.FileNameLabelBox=uix.VBox('Parent',this.Gui.DirHbox,...
			'BackgroundColor',rgb_white);
			this.Gui.FileNameBox=uix.VBox('Parent',this.Gui.DirHbox,...
			'BackgroundColor',rgb_white);
			set(this.Gui.DirHbox,'Widths',[-1,-2]);

			%Buttons for saving the fit and parameters
			this.Gui.SaveFitButton=uicontrol('Parent',this.Gui.SaveButtonBox,...
			'style','pushbutton','Background','w','String','Save Fit',...
			'Callback', @(hObject, eventdata) saveFitCallback(this, hObject, eventdata));
			set(this.Gui.SaveButtonBox,'Heights',button_h* ...
			ones(1,length(this.Gui.SaveButtonBox.Children)));

			%Labels for the edit boxes
			this.Gui.BaseDirLabel=annotation(this.Gui.FileNameLabelBox,...
			'textbox',[0.5,0.5,0.3,0.3],...
			'String','Save Directory','Units','Normalized',...
			'HorizontalAlignment','Left','VerticalAlignment','middle',...
			'FontSize',10,'BackgroundColor',rgb_white);
			this.Gui.SessionNameLabel=annotation(this.Gui.FileNameLabelBox,...
			'textbox',[0.5,0.5,0.3,0.3],...
			'String','Session Name','Units','Normalized',...
			'HorizontalAlignment','Left','VerticalAlignment','middle',...
			'FontSize',10,'BackgroundColor',rgb_white);
			this.Gui.FileNameLabel=annotation(this.Gui.FileNameLabelBox,...
			'textbox',[0.5,0.5,0.3,0.3],...
			'String','File Name','Units','Normalized',...
			'HorizontalAlignment','Left','VerticalAlignment','middle',...
			'FontSize',10,'BackgroundColor',rgb_white);
			set(this.Gui.FileNameLabelBox,'Heights',button_h*ones(1,3));

			%Boxes for editing the path and filename
			this.Gui.BaseDir=uicontrol('Parent',this.Gui.FileNameBox,...
			'style','edit','HorizontalAlignment','Left',...
			'FontSize',10);
			this.Gui.SessionName=uicontrol('Parent',this.Gui.FileNameBox,...
			'style','edit','HorizontalAlignment','Left',...
			'FontSize',10);
			this.Gui.FileName=uicontrol('Parent',this.Gui.FileNameBox,...
			'style','edit','HorizontalAlignment','Left',...
			'FontSize',10);
			set(this.Gui.FileNameBox,'Heights',button_h*ones(1,3));
			end

			%We first make the BoxPanels to speed up the process. Otherwise everything
			%in the BoxPanel must be redrawn every time we make a new one.
			panel_str=cell(1,this.n_params);
			for i=1:this.n_params
			%Generates the string for the panel handle
			panel_str{i}=sprintf('Panel_%s',this.fit_params{i});
			%Creates the panels
			this.Gui.(panel_str{i})=uix.BoxPanel( 'Parent', this.Gui.SliderHbox ,...
			'Padding',0,'BackgroundColor', 'w',...
			'Title',sprintf('%s (%s)',this.fit_param_names{i},this.fit_params{i}),...
			'TitleColor',rgb_blue,...
			'Position',[1+edit_width*(i-1),1,edit_width,slider_h],...
			'Visible','off');
			end

			%Loops over number of parameters to create a fit panel for each one
			for i=1:this.n_params
			%Generates the string for the vbox handle
			vbox_str=sprintf('Vbox_%s',this.fit_params{i});
			%Generates the string for the slider handle
			slider_str=sprintf('Slider_%s',this.fit_params{i});
			%Generates string for edit panels
			edit_str=sprintf('Edit_%s',this.fit_params{i});
			%Generates a string for the limit boxes
			lim_str=sprintf('Lim_%s',this.fit_params{i});

			%Creates the vbox inside the panel that allows stacking
			this.Gui.(vbox_str) =uix.VBox( 'Parent', ...
			this.Gui.(panel_str{i}),'Padding',0,'BackgroundColor', 'w');

			%Generates edit box for fit parameters
			this.Gui.(edit_str)=uicontrol('Parent',this.Gui.(vbox_str),...
			'Style','edit','String',sprintf('%3.3e',this.param_vals(i)),...
			'FontSize',14,'HorizontalAlignment','Right',...
			'Position',[1,48,edit_width-4,30],'Units','Pixels', ...
			'Callback', createParamFieldEditedCallback(this, i));

			%Sets up HBox for the lower and upper limits
			this.Gui.(lim_str)=uix.HBox('Parent',this.Gui.(vbox_str),...
			'Padding',0,'BackgroundColor','w');

			%Generates edit box for limits
			this.Gui.([lim_str,'_lower'])=uicontrol('Parent',this.Gui.(lim_str),...
			'Style','edit','String',sprintf('%3.3e',this.lim_lower(i)),...
			'FontSize',10,'HorizontalAlignment','Right',...
			'Position',[1,1,edit_width-4,30],'Units','Pixels', ...
			'Tooltip', 'Lower limit', ...
			'Callback', createLowerLimEditCallback(this, i));

			this.Gui.([lim_str,'_upper'])=uicontrol('Parent',this.Gui.(lim_str),...
			'Style','edit','String',sprintf('%3.3e',this.lim_upper(i)),...
			'FontSize',10,'HorizontalAlignment','Right',...
			'Position',[1,1,edit_width-4,30],'Units','Pixels', ...
			'Tooltip', 'Upper limit', ...
			'Callback', createUpperLimEditCallback(this, i));

			%Generates java-based slider. Looks nicer than MATLAB slider
			this.Gui.(slider_str)=uicomponent('Parent',this.Gui.(vbox_str),...
			'style','jslider','Value',50,'Orientation',0,...
			'MajorTickSpacing',20,'MinorTickSpacing',5,'Paintlabels',0,...
			'PaintTicks',1,'Background',java.awt.Color.white,...
			'pos',[1,-7,edit_width-4,55]);
			%Sets up callbacks for the slider
			this.Gui.([slider_str,'_callback'])=handle(this.Gui.(slider_str),...
			'CallbackProperties');
			%Note that this is triggered whenever the state changes, even if it is
			%programatically
			this.Gui.([slider_str,'_callback']).StateChangedCallback = ....
			createSliderStateChangedCallback(this, i);
			this.Gui.([slider_str,'_callback']).MouseReleasedCallback = ....
			createSliderMouseReleasedCallback(this, i);

			%Sets heights and minimum heights for the elements in the fit vbox
			set(this.Gui.(vbox_str),'Heights',[30,30,55],'MinimumHeights',[30,30,55])
			end

			%Makes all the panels at the bottom visible at the same time
			cellfun(@(x) set(this.Gui.(x),'Visible','on'),panel_str);

			end

rINSTCONTROL/@MyFit/createGui.m86613780ea80confint-fix

createGui.mView Options

rINSTCONTROL/@MyFit/createGui.m
86613780ea80confint-fix

createGui.m
View Options