% MyMetadata stores parameter-value pairs and can be saved in a readable % format. % % Metadata parameters can be strings, numerical values or cells, as well as % any arrays and structures of such with arbitrary nesting. Sub-indices are % automatically expanded when saving. classdef MyMetadata < dynamicprops & matlab.mixin.CustomDisplay & ... matlab.mixin.SetGet & matlab.mixin.Copyable properties (Access = public) % Header sections are separated by [hdr_spec, title, hdr_spec] title = '' hdr_spec = '==' % Columns are separated by this symbol (space-tab by default) column_sep = ' \t' % Comments start from this symbol comment_sep = '%' line_sep = '\r\n' % Limit for column padding. Variables which take more space than % this limit are ignored when calculating the padding length. pad_lim = 15 end properties (GetAccess = public, SetAccess = protected) ParamList = struct() end methods (Access = public) function this = MyMetadata(varargin) P = MyClassParser(this); processInputs(P, this, varargin{:}); end % Adds a new metadata parameter. function addParam(this, param_name, value, varargin) assert(isvarname(param_name), ['Parameter name must be a ' ... 'valid variable name.']); p = inputParser(); % Format specifier for printing the value addParameter(p, 'fmt_spec', '', @ischar); % Comment to be added to the line addParameter(p, 'comment', '', @ischar); addParameter(p, 'SubStruct', struct('type',{},'subs',{}),... @isstruct) parse(p, varargin{:}); % Add a dynamic property to store the parameter value H = addprop(this, param_name); H.Access = 'public'; % Hide the dynamic property from the output of display() % for beauty H.Hidden = true; % Initialize property with an empty variable of the same class % as value, this is important if SubStruct is an array index. this.(param_name) = feval([class(value),'.empty']); % Make sure that the comment does not contain new line or % carriage return characters, which would mess up formating % when saving the metadata [comment, is_mod] = toSingleLine(p.Results.comment); this.ParamList.(param_name).comment = comment; if is_mod warning(['Comment string for ''%s'' has been ' ... 'converted to single line.'], param_name); end this.ParamList.(param_name).fmt_spec = p.Results.fmt_spec; S = p.Results.SubStruct; if isempty(S) this.(param_name) = value; else % Construct full subscript reference with respect to 'this' S = [struct('type', '.', 'subs', param_name), ... p.Results.SubStruct]; % Assign the value of parameter this = subsasgn(this, S, value); %#ok end end function bool = isparam(this, param_name) bool = isfield(param_name, this.ParamList); end % Alias for addParam that is useful to ensure the correspondence % between metadata parameter names and object property names. function addObjProp(this, Obj, tag, varargin) addParam(this, tag, Obj.(tag), varargin{:}); end % Print metadata in a readable form function str = mdt2str(this) % Make the function spannable over arrays if isempty(this) str = ''; return elseif length(this) > 1 str_arr = arrayfun(@(x)mdt2str(x), this, ... 'UniformOutput', false); str = [str_arr{:}]; return end % Compose the list of parameter names expanded over subscripts % except for those which are already character arrays par_names = fieldnames(this.ParamList); % Expand parameters over subscripts, except for the arrays of % characters exp_par_names = cell(1, length(par_names)); max_nm_arr = zeros(1, length(par_names)); for i=1:length(par_names) % Expand parameter subscripts exp_par_names{i} = printSubs(this.(par_names{i}), ... 'own_name', par_names{i}, ... 'expansion_test', @(y) ~ischar(y)); % Max name length for this parameter including subscripts max_nm_arr(i) = max(cellfun(@(x) length(x), ... exp_par_names{i})); end % Calculate width of the name column name_pad_length = min(max(max_nm_arr), this.pad_lim); % Compose a list of parameter values converted to char strings val_strs = cell(1, length(par_names)); % Width of the values column will be the maximum parameter % string width val_pad_length = 0; for i=1:length(par_names) tmp_nm = par_names{i}; % Iterate over parameter indices for j=1:length(exp_par_names{i}) tmp_exp_nm = exp_par_names{i}{j}; TmpS = str2substruct(tmp_exp_nm); % Get the indexed value of parameter TmpS = [struct('type','.','subs', tmp_nm), TmpS]; %#ok tmp_val = subsref(this, TmpS); %Do the check to detect unsupported data type if ischar(tmp_val) && ~isvector(tmp_val) && ... ~isempty(tmp_val) warning(['Argument ''%s'' is a multi-dimensional ',... 'character array. It will be converted to ',... 'single string during saving. Use cell',... 'arrays to save data as a set of separate ',... 'strings.'], tmp_exp_nm) % Flatten tmp_val = tmp_val(:); end % Check for new line symbols in strings if (ischar(tmp_val) || isstring(tmp_val)) && ... any(ismember({newline, sprintf('\r')},tmp_val)) warning(['String values must not contain ' ... '''\\n'' and ''\\r'' symbols, replacing ' ... 'them with '' ''.']); tmp_val = replace(tmp_val, ... {newline, sprintf('\r')}, ' '); end fmt_spec = this.ParamList.(tmp_nm).fmt_spec; if isempty(fmt_spec) % Convert to string with format specifier % extracted from the varaible calss val_strs{i}{j} = var2str(tmp_val); else val_strs{i}{j} = sprintf(fmt_spec, tmp_val); end % Find maximum length to determine the colum width, % but, for beauty, do not account for variables with % excessively long value strings tmplen = length(val_strs{i}{j}); if (val_pad_length else str = [str, sprintf([par_fmt_spec, ls],... exp_par_names{i}{j}, val_strs{i}{j})]; %#ok end end end % Prints an extra line separator at the end str = [str, sprintf(ls)]; end % Save metadata to a file function save(this, filename) fileID = fopen(filename,'a'); fprintf(fileID, mdt2str(this)); fclose(fileID); end % Create a structure from metadata array function MdtList = arrToStruct(this) MdtList = struct(); for i = 1:length(this) fn = matlab.lang.makeValidName(this(i).title); MdtList.(fn) = this(i); end end end methods (Access = public, Static = true) % Create metadata indicating the present moment of time function TimeMdt = time(varargin) TimeMdt = MyMetadata(varargin{:}); if isempty(TimeMdt.title) TimeMdt.title = 'Time'; end dv = datevec(datetime('now')); addParam(TimeMdt, 'Year', dv(1), 'fmt_spec','%i'); addParam(TimeMdt, 'Month', dv(2), 'fmt_spec','%i'); addParam(TimeMdt, 'Day', dv(3), 'fmt_spec','%i'); addParam(TimeMdt, 'Hour', dv(4), 'fmt_spec','%i'); addParam(TimeMdt, 'Minute', dv(5), 'fmt_spec','%i'); addParam(TimeMdt, 'Second', floor(dv(6)), 'fmt_spec','%i'); addParam(TimeMdt, 'Millisecond',... round(1000*(dv(6)-floor(dv(6)))),'fmt_spec','%i'); end % Load metadata from file. Return all the entries found and % the number of the last line read. function [MdtArr, n_end_line] = load(filename, varargin) fileID = fopen(filename,'r'); MasterMdt = MyMetadata(varargin{:}); % Loop initialization MdtArr = MyMetadata.empty(); line_no = 0; % Loop continues until we reach the next header or we reach % the end of the file while ~feof(fileID) % Grabs the current line curr_line = fgetl(fileID); % Give a warning if the file is empty, i.e. if fgetl % returns -1 if curr_line == -1 disp(['Read empty file ', filename, '.']); break end % Skips if the current line is empty if isempty(deblank(curr_line)) continue end S = parseLine(MasterMdt, curr_line); switch S.type case 'title' % Add new a new metadata to the output list TmpMdt = MyMetadata(varargin{:}, 'title', S.match); MdtArr = [MdtArr, TmpMdt]; %#ok case 'paramval' % Add a new parameter-value pair to the current % metadata [name, value, comment, Subs] = S.match{:}; if ~isparam(TmpMdt, name) % Add new parameter addParam(TmpMdt, name, value, ... 'SubStruct', Subs, 'comment', comment); else % Assign the value to a new subscript of % an existing parameter Subs = [struct('type','.','subs',name), Subs]; %#ok this = subsasgn(this, Subs, value); end otherwise % Exit break end % Increment the counter line_no = line_no+1; end n_end_line = line_no; fclose(fileID); end end methods (Access = protected) % Parse string and determine the type of string function S = parseLine(this, str) S = struct( ... 'type', '', ... % title, paramval, other 'match', []); % parsed output % Check if the line contains a parameter - value pair. % First separate the comment if present pv_token = regexp(str, this.comment_sep, 'split', 'once'); if length(pv_token)>1 comment = pv_token{2}; % There is a comment else comment = ''; % There is no comment end % Then process name-value pair. Regard everything after % the first column separator as value. pv_token = regexp(pv_token{1}, this.column_sep, 'split', ... 'once'); % Remove leading and trailing blanks pv_token = strtrim(pv_token); if length(pv_token)>=2 % A candidate for parameter-value pair is found. Infer % the variable name and subscript reference. [Subs, name] = str2substruct(pv_token{1}); if isvarname(name) % Attempt converting the value to a number value = str2doubleHedged(pv_token{2}); S.type = 'paramval'; S.match = {name, value, comment, Subs}; return end end % Check if the line contains a title title_exp = [this.hdr_spec, '(\w.*)', this.hdr_spec]; title_token = regexp(str, title_exp, 'once', 'tokens'); if ~isempty(title_token) % Title expression found S.type = 'title'; S.match = title_token{1}; return end % No match found S.type = 'other'; S.match = {}; end % Make custom footer for command line display % (see matlab.mixin.CustomDisplay) function str = getFooter(this) if length(this) == 1 % For a single object display its properties str = ['Content:', newline, newline, ... replace(mdt2str(this), sprintf(this.line_sep), newline)]; elseif length(this) > 1 % For a non-empty array of objects display titles str = sprintf('\tTitles:\n\n'); for i = 1:length(this) str = [str, sprintf('%i\t%s\n', i, this(i).title)]; %#ok end str = [str, newline]; else % For an empty array display nothing str = ''; end end function Cpy = copyElement(this) % Copy static properties Cpy = copyElement@matlab.mixin.Copyable(this); % Copy dynamic properties param_names = fieldnames(this.ParamList); for i = 1:length(param_names) H = addprop(Cpy, param_names{i}); H.Access = 'public'; H.Hidden = true; Cpy.(param_names{i}) = this.(param_names{i}); end end end end