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write_fort90.m
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Mon, Mar 3, 05:17

write_fort90.m
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function [INPUT] = write_fort90(OUTPUTS,GRID,MODEL,INITIAL,TIME_INTEGRATION,BASIC)
% Write the input script "fort.90" with desired parameters
INPUT = 'fort.90';
fid = fopen(INPUT,'wt');
fprintf(fid,'&BASIC\n');
fprintf(fid,[' nrun = ', num2str(BASIC.nrun),'\n']);
fprintf(fid,[' dt = ', num2str(BASIC.dt),'\n']);
fprintf(fid,[' tmax = ', num2str(BASIC.tmax),'\n']);
fprintf(fid,[' RESTART = ', BASIC.RESTART,'\n']);
fprintf(fid,[' maxruntime = ', num2str(BASIC.maxruntime),'\n']);
fprintf(fid,'/\n');
fprintf(fid,'&GRID\n');
fprintf(fid,[' pmaxe =', num2str(GRID.pmaxe),'\n']);
fprintf(fid,[' jmaxe = ', num2str(GRID.jmaxe),'\n']);
fprintf(fid,[' pmaxi = ', num2str(GRID.pmaxi),'\n']);
fprintf(fid,[' jmaxi = ', num2str(GRID.jmaxi),'\n']);
fprintf(fid,[' Nr = ', num2str(GRID.Nr),'\n']);
fprintf(fid,[' Lr = ', num2str(GRID.Lr),'\n']);
fprintf(fid,[' Nz = ', num2str(GRID.Nz),'\n']);
fprintf(fid,[' Lz = ', num2str(GRID.Lz),'\n']);
fprintf(fid,[' kpar = ', num2str(GRID.kpar),'\n']);
fprintf(fid,'/\n');
fprintf(fid,'&OUTPUT_PAR\n');
fprintf(fid,[' nsave_0d = ', num2str(OUTPUTS.nsave_0d),'\n']);
fprintf(fid,[' nsave_1d = ', num2str(OUTPUTS.nsave_1d),'\n']);
fprintf(fid,[' nsave_2d = ', num2str(OUTPUTS.nsave_2d),'\n']);
fprintf(fid,[' nsave_5d = ', num2str(OUTPUTS.nsave_5d),'\n']);
fprintf(fid,[' nsave_cp = ', num2str(OUTPUTS.nsave_cp),'\n']);
fprintf(fid,[' write_doubleprecision = ', OUTPUTS.write_doubleprecision,'\n']);
fprintf(fid,[' resfile0 = ', OUTPUTS.resfile0,'\n']);
fprintf(fid,[' rstfile0 = ', OUTPUTS.rstfile0,'\n']);
fprintf(fid,[' job2load = ', num2str(OUTPUTS.job2load),'\n']);
fprintf(fid,'/\n');
fprintf(fid,'&MODEL_PAR\n');
fprintf(fid,' ! Collisionality\n');
fprintf(fid,[' CO = ', num2str(MODEL.CO),'\n']);
fprintf(fid,[' CLOS = ', num2str(MODEL.CLOS),'\n']);
fprintf(fid,[' NON_LIN = ', MODEL.NON_LIN,'\n']);
fprintf(fid,[' mu = ', num2str(MODEL.mu),'\n']);
fprintf(fid,[' mu_p = ', num2str(MODEL.mu_p),'\n']);
fprintf(fid,[' mu_j = ', num2str(MODEL.mu_j),'\n']);
fprintf(fid,[' nu = ', num2str(MODEL.nu),'\n']);
fprintf(fid,[' tau_e = ', num2str(MODEL.tau_e),'\n']);
fprintf(fid,[' tau_i = ', num2str(MODEL.tau_i),'\n']);
fprintf(fid,[' sigma_e = ', num2str(MODEL.sigma_e),'\n']);
fprintf(fid,[' sigma_i = ', num2str(MODEL.sigma_i),'\n']);
fprintf(fid,[' q_e = ', num2str(MODEL.q_e),'\n']);
fprintf(fid,[' q_i = ', num2str(MODEL.q_i),'\n']);
fprintf(fid,[' eta_n = ', num2str(MODEL.eta_n),'\n']);
fprintf(fid,[' eta_T = ', num2str(MODEL.eta_T),'\n']);
fprintf(fid,[' eta_B = ', num2str(MODEL.eta_B),'\n']);
fprintf(fid,[' lambdaD = ', num2str(MODEL.lambdaD),'\n']);
fprintf(fid,'/\n');
fprintf(fid,'&INITIAL_CON\n');
fprintf(fid,[' INIT_NOISY_PHI =', INITIAL.init_noisy_phi,'\n']);
% fprintf(fid,[' only_Na00 =', '.false.','\n']);
fprintf(fid,[' initback_moments =', num2str(INITIAL.initback_moments),'\n']);
fprintf(fid,[' initnoise_moments =', num2str(INITIAL.initnoise_moments),'\n']);
fprintf(fid,[' iseed =', num2str(INITIAL.iseed),'\n']);
fprintf(fid,[' selfmat_file =', INITIAL.selfmat_file,'\n']);
fprintf(fid,[' eimat_file =', INITIAL.eimat_file,'\n']);
fprintf(fid,[' iemat_file =', INITIAL.iemat_file,'\n']);
fprintf(fid,'/\n');
fprintf(fid,'&TIME_INTEGRATION_PAR\n');
fprintf(fid,[' numerical_scheme=', TIME_INTEGRATION.numerical_scheme,'\n']);
fprintf(fid,'/');
fclose(fid);
system(['cp fort.90 ',BASIC.RESDIR,'/.']);
end

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