User Details
User Details
- User Since
- Oct 18 2016, 15:01 (427 w, 6 d)
- Availability
- Available
- Organization
- epfl.ch (university)
Jan 25 2018
Jan 25 2018
Jan 24 2018
Jan 24 2018
Close bar plot for histograms
Jan 18 2018
Jan 18 2018
Changed README
Jan 17 2018
Jan 17 2018
Changed README
Dec 21 2017
Dec 21 2017
Fine tuning of scheduler
Fix integer multiple check
Crazy bug fix
andrea committed rMYLIBe64d00485a15: Strange bug of code not exectued after prange (authored by andrea).
Strange bug of code not exectued after prange
Dec 20 2017
Dec 20 2017
Minor change
Dec 19 2017
Dec 19 2017
Bin also distances
Minor changes
Remove compiler flags
Return bin count
Added binned variogram
Dec 18 2017
Dec 18 2017
Added comment
Avoid repetitions
Corrected computation
Cython variogram
Faster version of the variogram
Oct 20 2017
Oct 20 2017
Updated readme
Updated readme
Updated readme
Sep 15 2017
Sep 15 2017
andrea committed rCTRACKER3b69c029b018: Updated _ijkseed to deal with corner cases (authored by andrea).
Updated _ijkseed to deal with corner cases
Sep 8 2017
Sep 8 2017
Added comment.
Minor changes
andrea committed rLYAPUNOVbcf91a5a3465: Added option for computing non-isotropic FSLE (authored by andrea).
Added option for computing non-isotropic FSLE
andrea committed rLYAPUNOV0e7b2e34bcfd: Compute FSLE, checked with results by Artale 1997 (authored by andrea).
Compute FSLE, checked with results by Artale 1997
Sep 7 2017
Sep 7 2017
Initial commit
Aug 28 2017
Aug 28 2017
Do enforce maximum lengths of queues
Several bug fixes
Aug 24 2017
Aug 24 2017
andrea committed rCTRACKERbbe726519a95: Reproduce trajectories. Move unneeded stuff from self in particleContainer. (authored by andrea).
Reproduce trajectories. Move unneeded stuff from self in particleContainer.
andrea committed rCTRACKERb000821f6799: Bug fix, we don't want to finish the queue at each iteration (authored by andrea).
Bug fix, we don't want to finish the queue at each iteration
More correct output at each iteration
Aug 16 2017
Aug 16 2017
andrea committed R3351:a6a0a482f479: Merge branch 'master' of ssh://c4science.ch/diffusion/3351/c-tracker (authored by andrea).
Merge branch 'master' of ssh://c4science.ch/diffusion/3351/c-tracker
andrea committed R3351:7d764723a233: Use corner array and make sure we do not search beyond array borders (authored by andrea).
Use corner array and make sure we do not search beyond array borders
Aug 10 2017
Aug 10 2017
andrea committed R3351:156e32b17e69: Add check to remove invalid seeding points. Related to deviations from… (authored by andrea).
Add check to remove invalid seeding points. Related to deviations from…
andrea committed R3351:c85815686742: Added check for pathological cases of particles starting from land (authored by andrea).
Added check for pathological cases of particles starting from land
Aug 7 2017
Aug 7 2017
andrea committed R3351:f88982f7fa06: Changed algorithm for identification of seeding points. Slightly faster, more… (authored by andrea).
Changed algorithm for identification of seeding points. Slightly faster, more…
andrea committed R3351:7b9a3a7947f3: Removed compilation file, added file with conda installed list. (authored by andrea).
Removed compilation file, added file with conda installed list.
Ignore .pyd files
Make output queue larger
Aug 2 2017
Aug 2 2017
Bug fix for multithreading
Jul 26 2017
Jul 26 2017
andrea committed R3351:2e5389cde246: Actually start threads also for curvilinear grid (authored by andrea).
Actually start threads also for curvilinear grid
andrea committed R3351:01f24ff2a1e4: Added option for workin on rectangular cartesian grid (authored by andrea).
Added option for workin on rectangular cartesian grid
Separate cartesian module
May 18 2017
May 18 2017
Store info on kill area
andrea committed R3351:4acc733a4b9d: No need for large output codes (minor change) (authored by andrea).
No need for large output codes (minor change)
Split output to two files
Keep grid info of MITgcm in run file
andrea committed R3351:83a2e7bcfe45: Write exit position to _end variables, not tracks (authored by andrea).
Write exit position to _end variables, not tracks
May 16 2017
May 16 2017
andrea committed R3351:0219850194cc: Make double sure we store copies in the input queue (authored by andrea).
Make double sure we store copies in the input queue
Put file sync at the right loop level
Bug fix in the output of indices
andrea committed R3351:e5e437be95b2: Also the output from the seeding phase must be done through the separate… (authored by andrea).
Also the output from the seeding phase must be done through the separate…
andrea committed R3351:53def60d7971: Do not join the input queue, otherwise the program hangs just before ending… (authored by andrea).
Do not join the input queue, otherwise the program hangs just before ending…
May 15 2017
May 15 2017
andrea committed R3351:470b18b7f734: Use a queue for the input too (not fully tested yet) (authored by andrea).
Use a queue for the input too (not fully tested yet)
May 5 2017
May 5 2017
andrea committed R3351:3d1c238f6dff: Avoiding a function call, a very minor performance benefit. (authored by andrea).
Avoiding a function call, a very minor performance benefit.
andrea committed R3351:f53816f6a8a5: Put in the queue the starting time of the output (authored by andrea).
Put in the queue the starting time of the output
Added warning
Do netcdf output on a separate thread
Check land at the beginning of the loop
andrea committed R3351:fe08660d91eb: Check if on land after checking if it exited the domain (otherwise we read… (authored by andrea).
Check if on land after checking if it exited the domain (otherwise we read…
May 4 2017
May 4 2017
Avoid IO unless necessary
andrea committed R3351:7effdc3acd4c: Enable to experiment with different HDF5 chunk sizes for optimizing IO (authored by andrea).
Enable to experiment with different HDF5 chunk sizes for optimizing IO
Fix variable name
andrea committed R3351:1565d05d325a: Pass relevant array size, initialize array at full C speed (authored by andrea).
Pass relevant array size, initialize array at full C speed
Minor changes to configuration file
andrea committed R3351:f1d3764301b5: Deal with corner cases decently, fix bug in kill area writing (authored by andrea).
Deal with corner cases decently, fix bug in kill area writing
Added reminder of compiler flags
Change metadata on out code
Store exit time of particle
Do not mask unreleased particles code
andrea committed R3351:c29a09b2ff3a: Store IJK indexes of particles to deal with corner cases (authored by andrea).
Store IJK indexes of particles to deal with corner cases
May 3 2017
May 3 2017
PEP8-ified source
Initialise array faster
andrea committed R3351:9afc1985a90b: Small clean up, don't do stuff at every iteration if not needed, enable choice… (authored by andrea).
Small clean up, don't do stuff at every iteration if not needed, enable choice…
PEP8-ified the source
andrea committed R3351:26f446362613: Remove corner error, does not make any sense to me (it was from tracmass). (authored by andrea).
Remove corner error, does not make any sense to me (it was from tracmass).
andrea committed R3351:244b7a996d8a: Fix chunksize in netcdf output, sync file once in a while to make it easier to… (authored by andrea).
Fix chunksize in netcdf output, sync file once in a while to make it easier to…
andrea committed R3351:41b1c5cadd8c: Change chunksize, otherwise IO takes forever with large ensembles of particles (authored by andrea).
Change chunksize, otherwise IO takes forever with large ensembles of particles
andrea committed R3351:2f144fbb74ca: Don't sync the file, we use with statement to avoid it! (authored by andrea).
Don't sync the file, we use with statement to avoid it!
Don't waste time on multiple prints
Move stuff to initialization
Added example script to run.
andrea committed R3351:c1d317692295: Minor changes to stdout formatting. Fix airborne condition. (authored by andrea).
Minor changes to stdout formatting. Fix airborne condition.
andrea committed R3351:16bd100ac8e0: Enable output at submultiples of the GCM output step (authored by andrea).
Enable output at submultiples of the GCM output step
Fuck the GIL
May 2 2017
May 2 2017
Updated readme
Minor changes
Bug fixes, now we can reproduce tracmass
May 1 2017
May 1 2017
Moved single particle loop to cython
Added files to ignore