We followed the intro SCITAS Course to connect to the Clusters Documentation is here: https://scitas-data.epfl.ch/public/training/using_the_clusters.pdf Structure of cluster `/home/username` your personal area, shared among all 3 clusters `/work/biop` where biop sofware will be installed, shared among all 3 cluster `/scratch/username` is a high performance file system where we put the data we need to work on, it is not shared and depends on the cluster you are connected to =How to connect= =How to install software= =How to install software at the BIOP account= =How to launch a job= =Example Ilastik Launch= =Example CellProfiler Launch= =Example Fiji Launch=

We followed the intro SCITAS Course to connect to the Clusters Documentation is here: https://scitas-data.epfl.ch/public/training/using_the_clusters.pdf =Structure of cluster = `/home/username` your personal area, shared among all 3 clusters `/work/biop` where biop sofware will be installed, shared among all 3 cluster `/scratch/username` is a high performance file system where we put the data we need to work on, it is not shared and depends on the cluster you are connected to =How to connect= =How to install software= =How to install software at the BIOP account= =How to launch a job= =Example Ilastik Launch= =Example CellProfiler Launch= =Example Fiji Launch=

We followed the intro SCITAS Course to connect to the Clusters Documentation is here: https://scitas-data.epfl.ch/public/training/using_the_clusters.pdf =Structure of cluster = `/home/username` your personal area, shared among all 3 clusters `/work/biop` where biop sofware will be installed, shared among all 3 cluster `/scratch/username` is a high performance file system where we put the data we need to work on, it is not shared and depends on the cluster you are connected to =How to connect= =How to install software= =How to install software at the BIOP account= =How to launch a job= =Example Ilastik Launch= =Example CellProfiler Launch= =Example Fiji Launch=