Phriction Projects Wikis Bioimaging And Optics Platform Image Processing OMERO Viewing Data History Version 1 vs 3
Version 1 vs 3
Version 1 vs 3
Content Changes
Content Changes
= Viewing Data from the web using the OMERO.iviewer web app =
= Viewing High Content Screening (HCS) Data =
OMERO allows the importing, storing and viewing of screening data. Many common formats are supported as standard, although some screens benefit from custom handling of their metadata before or after import.
A demonstration server showing published screening and other high volume data is available for public viewing at:
http://idr-demo.openmicroscopy.org
# In OMERO.web, screens are represented in the data tree by dark grey folders.
Expand the Screen folder, expand the Plate container and select a Run.
Click on a well in the plate shown on the centre pane to view the data in that well.
Double-click on a well to open the image in the full viewer.
= More documentation on this topic... =
To learn more about viewing data with the OMERO.iviewer, we recommend you to visit the [[ https://omero-guides.readthedocs.io/en/latest/iviewer/docs/index.html | dedicated page from the official OMERO guide ]].
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{icon hand-o-right} [[ https://c4science.ch/w/bioimaging_and_optics_platform_biop/image-processing/omero/annotating-data/ | NEXT STEP: Annotating data ]]
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https://wiki-biop.epfl.ch/en/Image_Storage/OMERO/Viewing_Data
= Viewing Data from the web using the OMERO.iviewer web app =
= Viewing High Content Screening (HCS) Data =
OMERO allows the importing, storing and viewing of screening data. Many common formats are supported as standard, although some screens benefit from custom handling of their metadata before or after import.
A demonstration server showing published screening and other high volume data is available for public viewing at:
http://idr-demo.openmicroscopy.org
# In OMERO.web, screens are represented in the data tree by dark grey folders.
Expand the Screen folder, expand the Plate container and select a Run.
Click on a well in the plate shown on the centre pane to view the data in that well.
Double-click on a well to open the image in the full viewer.
= More documentation on this topic... =
To learn more about viewing data with the OMERO.iviewer, we recommend you to visit the [[ https://omero-guides.readthedocs.io/en/latest/iviewer/docs/index.html | dedicated page from the official OMERO guide ]].
---
{icon hand-o-right} [[ https://c4science.ch/w/bioimaging_and_optics_platform_biop/image-processing/omero/annotating-data/ | NEXT STEP: Annotating data ]]
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https://wiki-biop.epfl.ch/en/Image_Storage/OMERO/Viewing_Data
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