= Rationale = In order to simplify the installation and update of our plugins and macros to our end users, Oli has set up an Update Site for Fiji that is hosted by the BIOP website = Initial Configuration for Uploader = To be able to upload to our Update Site, we need to configure the Fiji Updater as follows Go to {nav Help > Update > Manage Update Sites} and locate the **PTBIOP** line {F1430548, width=500} Fill the columns | Host | Directory on Host | |------|----------------------| |sftp://biop@biop.epfl.ch | /biop/Fiji Update/| == Details == The `biop.epfl.ch` server is manged by the SV-IT department and is configured as follows: SFTP only connection using the `biop` username. When connected via SFTP, we access our website from the `/biop` folder. Oli created the `Fiji-Update` folder and the very first time the update site was initialized through the Fiji Updater, fiji uploaded some configuration files. = Uploading to PTBIOP Update Site = To upload simply go to {nav Help > Update > Advanced Mode} {F1430761, width=500} Select the file you want to upload and on the **Status/Action** column select **Upload to PTBIOP** from the dropdown menu/ NOTE: If you cannot see the **Upload to PTBIOP** option, either you did not configure your Fiji properly as per above or that you have pending updates. **The updater will not upload until your Fiji is up to date** {F1430913, width=500} Hit {nav Apply Changes} You will be prompted for the password {F1430947, width=500} {F1430980} Afterwards you should be informed that your files was uploaded successfully Share and Enjoy = In Progress Update Site = We are hosting the experimental plugins and features on an update site called "In Progress" Simply add the URL `https://biop.epfl.ch/InProgress` to your list of update sites. {F3882976, width=600}

= Activating our PTBIOP Fiji Update Site = Our Macros and Plugins make strong use of [[http://imagejdocu.tudor.lu/doku.php?id=plugin:utilities:action_bar:start| ActionBar]] and sometimes [[ http://imagej.net/ImageScience | ImageScience ]] In order to use it, you can go to {nav Help > Update...} Select {nav Manage Update Sites} and locate the following sites from the list (Alphabelical order) - **IBMP-CNRS** - ActionBar and others - **ImageScience **- Laplacian Filter (It used to be bundled with Fiji, but no longer) - **PTBIOP** - Our update site https://biop.epfl.ch/Fiji-Update/ **Check the box** on the left of each of these. {F3883165, width=100%} = Plugins in Development = Use the button "Add update site", specify a name and the adress as below. | **Name** | **URL** | | BIOP-Dev | https://biop.epfl.ch/Fiji-Update-Dev/ |

= Rationale = In order to simplify the installation and update of our plugins and macros to our end users, Oli has set up an Update Site for Fiji that is hosted by the BIOP website = Initial Configuration for Uploader = To be able to upload to our Update Site, we need to configure the Fiji Updater as follows Go to {nav Help > Update > Manage Update Sites} and locate the **PTBIOP** line {F1430548, width=500}Activating our PTBIOP Fiji Update Site = Fill the columns | Host | Directory on Host | |------|----------------------| |sftp://biop@biop.epfl.ch | /biop/Fiji Update/|Our Macros and Plugins make strong use of [[http://imagejdocu.tudor.lu/doku.php?id=plugin:utilities:action_bar:start| ActionBar]] and sometimes [[ http://imagej.net/ImageScience | ImageScience ]] == Details ==In order to use it, you can go to {nav Help > Update...} The `biop.epfl.ch` server is manged by the SV-IT department and is configured as follows: SFTP only connection using the `biop` username.Select {nav Manage Update Sites} and locate the following sites from the list (Alphabelical order) When connected via SFTP, we access our website from the `/biop` folder.- **IBMP-CNRS** - ActionBar and others Oli created the `Fiji-Update` folder and the very first time the update site was initialized through the Fiji Updater, fiji uploaded some configuration files. = Uploading to PTBIOP Update Site = To upload simply go to {nav Help > Update > Advanced Mode} {F1430761, width=500} Select the file you want to upload and on the **Status/Action** column select **Upload to PTBIOP** from the dropdown menu/ NOTE: If you cannot see the **Upload to PTBIOP** option, either you did not configure your Fiji properly as per above or that you have pending updates. **The updater will not upload until your Fiji is up to date** {F1430913- **ImageScience **- Laplacian Filter (It used to be bundled with Fiji, width=500} Hit {nav Apply Changes}but no longer) You will be prompted for- **PTBIOP** - Our update site https://biop.epfl.ch/Fiji-Update/ **Check the password {F1430947, width=500}box** on the left of each of these. {F1430980}{F3883165, width=100%} Afterwards you should be informed that your files was uploaded successfully= Plugins in Development = SharUse the button "Add update site", specify a name and Enjoyd the adress as below. = In Progress Update Site = We are hosting the experimental plugins and features on an update site called "In Progress" | **Name** | **URL** | Simply add the URL ` | BIOP-Dev | https://biop.epfl.ch/InProgress` to your list of uFiji-Update sites. {F3882976, width=600}-Dev/ |