diff --git a/cmake/AkantuMacros.cmake b/cmake/AkantuMacros.cmake
index 365bd5cff..8ad1241ac 100644
--- a/cmake/AkantuMacros.cmake
+++ b/cmake/AkantuMacros.cmake
@@ -1,364 +1,363 @@
#===============================================================================
# @file AkantuMacros.cmake
#
# @author Guillaume Anciaux <guillaume.anciaux@epfl.ch>
# @author Nicolas Richart <nicolas.richart@epfl.ch>
#
# @date creation: Fri Oct 22 2010
# @date last modification: Fri Dec 11 2015
#
# @brief Set of macros used by akantu cmake files
#
# @section LICENSE
#
# Copyright (©) 2010-2012, 2014, 2015 EPFL (Ecole Polytechnique Fédérale de
# Lausanne) Laboratory (LSMS - Laboratoire de Simulation en Mécanique des
# Solides)
#
# Akantu is free software: you can redistribute it and/or modify it under the
# terms of the GNU Lesser General Public License as published by the Free
# Software Foundation, either version 3 of the License, or (at your option) any
# later version.
#
# Akantu is distributed in the hope that it will be useful, but WITHOUT ANY
# WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
# A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more
# details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with Akantu. If not, see <http://www.gnu.org/licenses/>.
#
#===============================================================================
#===============================================================================
function(set_third_party_shared_libirary_name _var _lib)
set(${_var}
${PROJECT_BINARY_DIR}/third-party/lib/${CMAKE_SHARED_LIBRARY_PREFIX}${_lib}${CMAKE_SHARED_LIBRARY_SUFFIX}
CACHE FILEPATH "" FORCE)
endfunction()
# ==============================================================================
function(get_target_list_of_associated_files tgt files)
get_target_property(_type ${tgt} TYPE)
if(_type STREQUAL "SHARED_LIBRARY"
OR _type STREQUAL "STATIC_LIBRARY"
OR _type STREQUAL "MODULE_LIBRARY"
OR _type STREQUAL "EXECUTABLE")
get_target_property(_srcs ${tgt} SOURCES)
set(_dep_ressources)
foreach(_file ${_srcs})
list(APPEND _dep_ressources ${CMAKE_CURRENT_SOURCE_DIR}/${_file})
endforeach()
else()
get_target_property(_dep_ressources ${tgt} RESSOURCES)
endif()
set(${files} ${_dep_ressources} PARENT_SCOPE)
endfunction()
#===============================================================================
# Generate the list of currently loaded materials
function(generate_material_list)
message(STATUS "Determining the list of recognized materials...")
package_get_all_include_directories(
AKANTU_LIBRARY_INCLUDE_DIRS
)
package_get_all_external_informations(
AKANTU_EXTERNAL_INCLUDE_DIR
AKANTU_EXTERNAL_LIBRARIES
)
set(_include_dirs ${AKANTU_INCLUDE_DIRS} ${AKANTU_EXTERNAL_INCLUDE_DIR})
try_run(_material_list_run _material_list_compile
${CMAKE_BINARY_DIR}
${PROJECT_SOURCE_DIR}/cmake/material_lister.cc
CMAKE_FLAGS "-DINCLUDE_DIRECTORIES:STRING=${_include_dirs}"
COMPILE_DEFINITIONS "-DAKANTU_CMAKE_LIST_MATERIALS"
COMPILE_OUTPUT_VARIABLE _compile_results
RUN_OUTPUT_VARIABLE _result_material_list)
if(_material_list_compile AND "${_material_list_run}" EQUAL 0)
message(STATUS "Materials included in Akantu:")
string(REPLACE "\n" ";" _material_list "${_result_material_list}")
foreach(_mat ${_material_list})
string(REPLACE ":" ";" _mat_key "${_mat}")
list(GET _mat_key 0 _key)
list(GET _mat_key 1 _class)
list(LENGTH _mat_key _l)
if("${_l}" GREATER 2)
list(REMOVE_AT _mat_key 0 1)
set(_opt " -- options: [")
foreach(_o ${_mat_key})
set(_opt "${_opt} ${_o}")
endforeach()
set(_opt "${_opt} ]")
else()
set(_opt "")
endif()
message(STATUS " ${_class} -- key: ${_key}${_opt}")
endforeach()
else()
message(STATUS "Could not determine the list of materials.")
message("${_compile_results}")
endif()
endfunction()
#===============================================================================
# Declare the options for the types and defines the approriate typedefs
function(declare_akantu_types)
include(CheckCXXCompilerFlag)
- check_cxx_compiler_flag (-std=c++0x HAVE_CPP_0X)
-
+ check_cxx_compiler_flag (-std=c++11 HAVE_CPP_11)
unset(_cpp_11_flag)
- if(HAVE_CPP_0X)
- set(_cpp_11_flag "-std=c++0x")
+ if(HAVE_CPP_11)
+ set(_cpp_11_flag "-std=c++11")
else()
- check_cxx_compiler_flag (-std=c++11 HAVE_CPP_11)
- if(HAVE_CPP_11)
- set(_cpp_11_flag "-std=c++11")
+ check_cxx_compiler_flag (-std=c++0x HAVE_CPP_0X)
+ if(HAVE_CPP_0X)
+ set(_cpp_11_flag "-std=c++0x")
endif()
endif()
set(AKANTU_CXX11_FLAGS "${_cpp_11_flag}" CACHE INTERNAL "")
set(AKANTU_TYPE_FLOAT "double (64bit)" CACHE STRING "Precision force floating point types")
mark_as_advanced(AKANTU_TYPE_FLOAT)
set_property(CACHE AKANTU_TYPE_FLOAT PROPERTY STRINGS
"quadruple (128bit)"
"double (64bit)"
"float (32bit)"
)
set(AKANTU_TYPE_INTEGER "int (32bit)" CACHE STRING "Size of the integer types")
mark_as_advanced(AKANTU_TYPE_INTEGER)
set_property(CACHE AKANTU_TYPE_INTEGER PROPERTY STRINGS
"int (32bit)"
"long int (64bit)"
)
include(CheckTypeSize)
# ----------------------------------------------------------------------------
# Floating point types
# ----------------------------------------------------------------------------
if(AKANTU_TYPE_FLOAT STREQUAL "float (32bit)")
set(AKANTU_FLOAT_TYPE "float" CACHE INTERNAL "")
set(AKANTU_FLOAT_SIZE 4 CACHE INTERNAL "")
elseif(AKANTU_TYPE_FLOAT STREQUAL "double (64bit)")
set(AKANTU_FLOAT_TYPE "double" CACHE INTERNAL "")
set(AKANTU_FLOAT_SIZE 8 CACHE INTERNAL "")
elseif(AKANTU_TYPE_FLOAT STREQUAL "quadruple (128bit)")
check_type_size("long double" LONG_DOUBLE)
if(HAVE_LONG_DOUBLE)
set(AKANTU_FLOAT_TYPE "long double" CACHE INTERNAL "")
set(AKANTU_FLOAT_SIZE 16 CACHE INTERNAL "")
message("This feature is not tested and will most probably not compile")
else()
message(FATAL_ERROR "The type long double is not defined on your system")
endif()
else()
message(FATAL_ERROR "The float type is not defined")
endif()
include(CheckIncludeFileCXX)
include(CheckCXXSourceCompiles)
# ----------------------------------------------------------------------------
# Integer types
# ----------------------------------------------------------------------------
check_include_file_cxx(cstdint HAVE_CSTDINT)
if(NOT HAVE_CSTDINT)
check_include_file_cxx(stdint.h HAVE_STDINT_H)
if(HAVE_STDINT_H)
list(APPEND _int_include stdint.h)
endif()
else()
list(APPEND _int_include cstdint)
endif()
check_include_file_cxx(cstddef HAVE_CSTDDEF)
if(NOT HAVE_CSTDINT)
check_include_file_cxx(stddef.h HAVE_STDDEF_H)
if(HAVE_STDINT_H)
list(APPEND _int_include stddef.h)
endif()
else()
list(APPEND _int_include cstddef)
endif()
if(AKANTU_TYPE_INTEGER STREQUAL "int (32bit)")
set(AKANTU_INTEGER_SIZE 4 CACHE INTERNAL "")
check_type_size("int" INT)
if(INT EQUAL 4)
set(AKANTU_SIGNED_INTEGER_TYPE "int" CACHE INTERNAL "")
set(AKANTU_UNSIGNED_INTEGER_TYPE "unsigned int" CACHE INTERNAL "")
else()
check_type_size("int32_t" INT32_T LANGUAGE CXX)
if(HAVE_INT32_T)
set(AKANTU_SIGNED_INTEGER_TYPE "int32_t" CACHE INTERNAL "")
set(AKANTU_UNSIGNED_INTEGER_TYPE "uint32_t" CACHE INTERNAL "")
list(APPEND _extra_includes ${_int_include})
endif()
endif()
elseif(AKANTU_TYPE_INTEGER STREQUAL "long int (64bit)")
set(AKANTU_INTEGER_SIZE 8 CACHE INTERNAL "")
check_type_size("long int" LONG_INT)
if(LONG_INT EQUAL 8)
set(AKANTU_SIGNED_INTEGER_TYPE "long int" CACHE INTERNAL "")
set(AKANTU_UNSIGNED_INTEGER_TYPE "unsigned long int" CACHE INTERNAL "")
else()
check_type_size("long long int" LONG_LONG_INT)
if(HAVE_LONG_LONG_INT AND LONG_LONG_INT EQUAL 8)
set(AKANTU_SIGNED_INTEGER_TYPE "long long int" CACHE INTERNAL "")
set(AKANTU_UNSIGNED_INTEGER_TYPE "unsigned long long int" CACHE INTERNAL "")
else()
check_type_size("int64_t" INT64_T)
if(HAVE_INT64_T)
set(AKANTU_SIGNED_INTEGER_TYPE "int64_t" CACHE INTERNAL "")
set(AKANTU_UNSIGNED_INTEGER_TYPE "uint64_t" CACHE INTERNAL "")
list(APPEND _extra_includes ${_int_include})
endif()
endif()
endif()
else()
message(FATAL_ERROR "The integer type is not defined")
endif()
# ----------------------------------------------------------------------------
# unordered map type
# ----------------------------------------------------------------------------
check_include_file_cxx(unordered_map HAVE_UNORDERED_MAP)
set(AKANTU_UNORDERED_MAP_IS_CXX11 TRUE CACHE INTERNAL "")
if(HAVE_UNORDERED_MAP)
list(APPEND _extra_includes unordered_map)
set(AKANTU_UNORDERED_MAP_TYPE "std::unordered_map" CACHE INTERNAL "")
set(AKANTU_UNORDERED_MAP_NAMESPACE_BEGIN "namespace std {" CACHE INTERNAL "")
set(AKANTU_UNORDERED_MAP_NAMESPACE_END "}" CACHE INTERNAL "")
else()
check_include_file_cxx(tr1/unordered_map HAVE_TR1_UNORDERED_MAP)
if(HAVE_TR1_UNORDERED_MAP)
list(APPEND _extra_includes tr1/unordered_map)
set(AKANTU_UNORDERED_MAP_TYPE "std::tr1::unordered_map" CACHE INTERNAL "")
set(AKANTU_UNORDERED_MAP_NAMESPACE_BEGIN "namespace std { namespace tr1 {" CACHE INTERNAL "")
set(AKANTU_UNORDERED_MAP_NAMESPACE_END "}}" CACHE INTERNAL "")
else()
list(APPEND _extra_includes map)
set(AKANTU_UNORDERED_MAP_TYPE "std::map" CACHE INTERNAL "")
set(AKANTU_UNORDERED_MAP_IS_CXX11 FALSE CACHE INTERNAL "")
endif()
endif()
# ----------------------------------------------------------------------------
# hash function
# ----------------------------------------------------------------------------
unset(AKANTU_HASH_TYPE CACHE)
check_include_file_cxx(functional HAVE_FUNCTIONAL)
set(AKANTU_HASH_IS_CXX11 TRUE CACHE INTERNAL "")
if(HAVE_FUNCTIONAL AND AKANTU_CXX11_FLAGS)
list(APPEND _extra_includes functional)
check_cxx_source_compiles("
#include <functional>
template<class T>
std::size_t hash(const T & t) {
typedef typename std::hash<T> hash_type;
return hash_type()(t);
};
int main() { return 0; }
" HAVE_HASH)
if(HAVE_HASH)
set(AKANTU_HASH_TYPE "std::hash" CACHE INTERNAL "")
endif()
endif()
if(NOT AKANTU_HASH_TYPE)
check_include_file_cxx(tr1/functional HAVE_TR1_HASH)
if(HAVE_TR1_HASH)
list(APPEND _extra_includes tr1/functional)
set(AKANTU_HASH_TYPE "std::tr1::hash" CACHE INTERNAL "")
else()
check_include_file_cxx(boost/functional/hash.hpp HAVE_BOOST_HASH)
list(APPEND _extra_includes boost/functional/hash.hpp)
set(AKANTU_HASH_TYPE "boost::hash" CACHE INTERNAL "")
set(AKANTU_HASH_IS_CXX11 FALSE CACHE INTERNAL "")
endif()
endif()
# ----------------------------------------------------------------------------
# includes
# ----------------------------------------------------------------------------
foreach(_inc ${_extra_includes})
set(_incs "#include <${_inc}>\n${_incs}")
endforeach()
set(AKANTU_TYPES_EXTRA_INCLUDES ${_incs} CACHE INTERNAL "")
endfunction()
#===============================================================================
if(__CMAKE_PARSE_ARGUMENTS_INCLUDED)
return()
endif()
set(__CMAKE_PARSE_ARGUMENTS_INCLUDED TRUE)
function(CMAKE_PARSE_ARGUMENTS prefix _optionNames _singleArgNames _multiArgNames)
# first set all result variables to empty/FALSE
foreach(arg_name ${_singleArgNames} ${_multiArgNames})
set(${prefix}_${arg_name})
endforeach(arg_name)
foreach(option ${_optionNames})
set(${prefix}_${option} FALSE)
endforeach(option)
set(${prefix}_UNPARSED_ARGUMENTS)
set(insideValues FALSE)
set(currentArgName)
# now iterate over all arguments and fill the result variables
foreach(currentArg ${ARGN})
list(FIND _optionNames "${currentArg}" optionIndex) # ... then this marks the end of the arguments belonging to this keyword
list(FIND _singleArgNames "${currentArg}" singleArgIndex) # ... then this marks the end of the arguments belonging to this keyword
list(FIND _multiArgNames "${currentArg}" multiArgIndex) # ... then this marks the end of the arguments belonging to this keyword
if(${optionIndex} EQUAL -1 AND ${singleArgIndex} EQUAL -1 AND ${multiArgIndex} EQUAL -1)
if(insideValues)
if("${insideValues}" STREQUAL "SINGLE")
set(${prefix}_${currentArgName} ${currentArg})
set(insideValues FALSE)
elseif("${insideValues}" STREQUAL "MULTI")
list(APPEND ${prefix}_${currentArgName} ${currentArg})
endif()
else(insideValues)
list(APPEND ${prefix}_UNPARSED_ARGUMENTS ${currentArg})
endif(insideValues)
else()
if(NOT ${optionIndex} EQUAL -1)
set(${prefix}_${currentArg} TRUE)
set(insideValues FALSE)
elseif(NOT ${singleArgIndex} EQUAL -1)
set(currentArgName ${currentArg})
set(${prefix}_${currentArgName})
set(insideValues "SINGLE")
elseif(NOT ${multiArgIndex} EQUAL -1)
set(currentArgName ${currentArg})
set(${prefix}_${currentArgName})
set(insideValues "MULTI")
endif()
endif()
endforeach(currentArg)
# propagate the result variables to the caller:
foreach(arg_name ${_singleArgNames} ${_multiArgNames} ${_optionNames})
set(${prefix}_${arg_name} ${${prefix}_${arg_name}} PARENT_SCOPE)
endforeach(arg_name)
set(${prefix}_UNPARSED_ARGUMENTS ${${prefix}_UNPARSED_ARGUMENTS} PARENT_SCOPE)
endfunction(CMAKE_PARSE_ARGUMENTS _options _singleArgs _multiArgs)
diff --git a/doc/doxygen/akantu.dox.in b/doc/doxygen/akantu.dox.in
index 7577fc847..ca5cc4d45 100644
--- a/doc/doxygen/akantu.dox.in
+++ b/doc/doxygen/akantu.dox.in
@@ -1,1818 +1,1773 @@
# Doxyfile 1.7.6.1
# This file describes the settings to be used by the documentation system
# doxygen (www.doxygen.org) for a project
#
# All text after a hash (#) is considered a comment and will be ignored
# The format is:
# TAG = value [value, ...]
# For lists items can also be appended using:
# TAG += value [value, ...]
# Values that contain spaces should be placed between quotes (" ")
#---------------------------------------------------------------------------
# Project related configuration options
#---------------------------------------------------------------------------
# This tag specifies the encoding used for all characters in the config file
# that follow. The default is UTF-8 which is also the encoding used for all
# text before the first occurrence of this tag. Doxygen uses libiconv (or the
# iconv built into libc) for the transcoding. See
# http://www.gnu.org/software/libiconv for the list of possible encodings.
DOXYFILE_ENCODING = UTF-8
# The PROJECT_NAME tag is a single word (or sequence of words) that should
# identify the project. Note that if you do not use Doxywizard you need
# to put quotes around the project name if it contains spaces.
PROJECT_NAME = @CMAKE_PROJECT_NAME@
# The PROJECT_NUMBER tag can be used to enter a project or revision number.
# This could be handy for archiving the generated documentation or
# if some version control system is used.
PROJECT_NUMBER = @AKANTU_VERSION@
# Using the PROJECT_BRIEF tag one can provide an optional one line description
# for a project that appears at the top of each page and should give viewer
# a quick idea about the purpose of the project. Keep the description short.
PROJECT_BRIEF =
# With the PROJECT_LOGO tag one can specify an logo or icon that is
# included in the documentation. The maximum height of the logo should not
# exceed 55 pixels and the maximum width should not exceed 200 pixels.
# Doxygen will copy the logo to the output directory.
PROJECT_LOGO =
# The OUTPUT_DIRECTORY tag is used to specify the (relative or absolute)
# base path where the generated documentation will be put.
# If a relative path is entered, it will be relative to the location
# where doxygen was started. If left blank the current directory will be used.
OUTPUT_DIRECTORY = .
# If the CREATE_SUBDIRS tag is set to YES, then doxygen will create
# 4096 sub-directories (in 2 levels) under the output directory of each output
# format and will distribute the generated files over these directories.
# Enabling this option can be useful when feeding doxygen a huge amount of
# source files, where putting all generated files in the same directory would
# otherwise cause performance problems for the file system.
CREATE_SUBDIRS = NO
# The OUTPUT_LANGUAGE tag is used to specify the language in which all
# documentation generated by doxygen is written. Doxygen will use this
# information to generate all constant output in the proper language.
# The default language is English, other supported languages are:
# Afrikaans, Arabic, Brazilian, Catalan, Chinese, Chinese-Traditional,
# Croatian, Czech, Danish, Dutch, Esperanto, Farsi, Finnish, French, German,
# Greek, Hungarian, Italian, Japanese, Japanese-en (Japanese with English
# messages), Korean, Korean-en, Lithuanian, Norwegian, Macedonian, Persian,
# Polish, Portuguese, Romanian, Russian, Serbian, Serbian-Cyrillic, Slovak,
# Slovene, Spanish, Swedish, Ukrainian, and Vietnamese.
OUTPUT_LANGUAGE = English
# If the BRIEF_MEMBER_DESC tag is set to YES (the default) Doxygen will
# include brief member descriptions after the members that are listed in
# the file and class documentation (similar to JavaDoc).
# Set to NO to disable this.
BRIEF_MEMBER_DESC = YES
# If the REPEAT_BRIEF tag is set to YES (the default) Doxygen will prepend
# the brief description of a member or function before the detailed description.
# Note: if both HIDE_UNDOC_MEMBERS and BRIEF_MEMBER_DESC are set to NO, the
# brief descriptions will be completely suppressed.
REPEAT_BRIEF = YES
# This tag implements a quasi-intelligent brief description abbreviator
# that is used to form the text in various listings. Each string
# in this list, if found as the leading text of the brief description, will be
# stripped from the text and the result after processing the whole list, is
# used as the annotated text. Otherwise, the brief description is used as-is.
# If left blank, the following values are used ("$name" is automatically
# replaced with the name of the entity): "The $name class" "The $name widget"
# "The $name file" "is" "provides" "specifies" "contains"
# "represents" "a" "an" "the"
ABBREVIATE_BRIEF = "The $name class" \
"The $name widget" \
"The $name file" \
is \
provides \
specifies \
contains \
represents \
a \
an \
the
# If the ALWAYS_DETAILED_SEC and REPEAT_BRIEF tags are both set to YES then
# Doxygen will generate a detailed section even if there is only a brief
# description.
ALWAYS_DETAILED_SEC = NO
# If the INLINE_INHERITED_MEMB tag is set to YES, doxygen will show all
# inherited members of a class in the documentation of that class as if those
# members were ordinary class members. Constructors, destructors and assignment
# operators of the base classes will not be shown.
INLINE_INHERITED_MEMB = NO
# If the FULL_PATH_NAMES tag is set to YES then Doxygen will prepend the full
# path before files name in the file list and in the header files. If set
# to NO the shortest path that makes the file name unique will be used.
FULL_PATH_NAMES = YES
# If the FULL_PATH_NAMES tag is set to YES then the STRIP_FROM_PATH tag
# can be used to strip a user-defined part of the path. Stripping is
# only done if one of the specified strings matches the left-hand part of
# the path. The tag can be used to show relative paths in the file list.
# If left blank the directory from which doxygen is run is used as the
# path to strip.
STRIP_FROM_PATH = @CMAKE_SOURCE_DIR@
# The STRIP_FROM_INC_PATH tag can be used to strip a user-defined part of
# the path mentioned in the documentation of a class, which tells
# the reader which header file to include in order to use a class.
# If left blank only the name of the header file containing the class
# definition is used. Otherwise one should specify the include paths that
# are normally passed to the compiler using the -I flag.
STRIP_FROM_INC_PATH = @CMAKE_SOURCE_DIR@
# If the SHORT_NAMES tag is set to YES, doxygen will generate much shorter
# (but less readable) file names. This can be useful if your file system
# doesn't support long names like on DOS, Mac, or CD-ROM.
SHORT_NAMES = NO
# If the JAVADOC_AUTOBRIEF tag is set to YES then Doxygen
# will interpret the first line (until the first dot) of a JavaDoc-style
# comment as the brief description. If set to NO, the JavaDoc
# comments will behave just like regular Qt-style comments
# (thus requiring an explicit @brief command for a brief description.)
JAVADOC_AUTOBRIEF = NO
# If the QT_AUTOBRIEF tag is set to YES then Doxygen will
# interpret the first line (until the first dot) of a Qt-style
# comment as the brief description. If set to NO, the comments
# will behave just like regular Qt-style comments (thus requiring
# an explicit \brief command for a brief description.)
QT_AUTOBRIEF = NO
# The MULTILINE_CPP_IS_BRIEF tag can be set to YES to make Doxygen
# treat a multi-line C++ special comment block (i.e. a block of //! or ///
# comments) as a brief description. This used to be the default behaviour.
# The new default is to treat a multi-line C++ comment block as a detailed
# description. Set this tag to YES if you prefer the old behaviour instead.
MULTILINE_CPP_IS_BRIEF = NO
# If the INHERIT_DOCS tag is set to YES (the default) then an undocumented
# member inherits the documentation from any documented member that it
# re-implements.
INHERIT_DOCS = YES
# If the SEPARATE_MEMBER_PAGES tag is set to YES, then doxygen will produce
# a new page for each member. If set to NO, the documentation of a member will
# be part of the file/class/namespace that contains it.
SEPARATE_MEMBER_PAGES = NO
# The TAB_SIZE tag can be used to set the number of spaces in a tab.
# Doxygen uses this value to replace tabs by spaces in code fragments.
TAB_SIZE = 4
# This tag can be used to specify a number of aliases that acts
# as commands in the documentation. An alias has the form "name=value".
# For example adding "sideeffect=\par Side Effects:\n" will allow you to
# put the command \sideeffect (or @sideeffect) in the documentation, which
# will result in a user-defined paragraph with heading "Side Effects:".
# You can put \n's in the value part of an alias to insert newlines.
ALIASES =
# This tag can be used to specify a number of word-keyword mappings (TCL only).
# A mapping has the form "name=value". For example adding
# "class=itcl::class" will allow you to use the command class in the
# itcl::class meaning.
TCL_SUBST =
# Set the OPTIMIZE_OUTPUT_FOR_C tag to YES if your project consists of C
# sources only. Doxygen will then generate output that is more tailored for C.
# For instance, some of the names that are used will be different. The list
# of all members will be omitted, etc.
OPTIMIZE_OUTPUT_FOR_C = NO
# Set the OPTIMIZE_OUTPUT_JAVA tag to YES if your project consists of Java
# sources only. Doxygen will then generate output that is more tailored for
# Java. For instance, namespaces will be presented as packages, qualified
# scopes will look different, etc.
OPTIMIZE_OUTPUT_JAVA = NO
# Set the OPTIMIZE_FOR_FORTRAN tag to YES if your project consists of Fortran
# sources only. Doxygen will then generate output that is more tailored for
# Fortran.
OPTIMIZE_FOR_FORTRAN = NO
# Set the OPTIMIZE_OUTPUT_VHDL tag to YES if your project consists of VHDL
# sources. Doxygen will then generate output that is tailored for
# VHDL.
OPTIMIZE_OUTPUT_VHDL = NO
# Doxygen selects the parser to use depending on the extension of the files it
# parses. With this tag you can assign which parser to use for a given extension.
# Doxygen has a built-in mapping, but you can override or extend it using this
# tag. The format is ext=language, where ext is a file extension, and language
# is one of the parsers supported by doxygen: IDL, Java, Javascript, CSharp, C,
# C++, D, PHP, Objective-C, Python, Fortran, VHDL, C, C++. For instance to make
# doxygen treat .inc files as Fortran files (default is PHP), and .f files as C
# (default is Fortran), use: inc=Fortran f=C. Note that for custom extensions
# you also need to set FILE_PATTERNS otherwise the files are not read by doxygen.
EXTENSION_MAPPING =
# If you use STL classes (i.e. std::string, std::vector, etc.) but do not want
# to include (a tag file for) the STL sources as input, then you should
# set this tag to YES in order to let doxygen match functions declarations and
# definitions whose arguments contain STL classes (e.g. func(std::string); v.s.
# func(std::string) {}). This also makes the inheritance and collaboration
# diagrams that involve STL classes more complete and accurate.
BUILTIN_STL_SUPPORT = NO
# If you use Microsoft's C++/CLI language, you should set this option to YES to
# enable parsing support.
CPP_CLI_SUPPORT = NO
# Set the SIP_SUPPORT tag to YES if your project consists of sip sources only.
# Doxygen will parse them like normal C++ but will assume all classes use public
# instead of private inheritance when no explicit protection keyword is present.
SIP_SUPPORT = NO
# For Microsoft's IDL there are propget and propput attributes to indicate getter
# and setter methods for a property. Setting this option to YES (the default)
# will make doxygen replace the get and set methods by a property in the
# documentation. This will only work if the methods are indeed getting or
# setting a simple type. If this is not the case, or you want to show the
# methods anyway, you should set this option to NO.
IDL_PROPERTY_SUPPORT = YES
# If member grouping is used in the documentation and the DISTRIBUTE_GROUP_DOC
# tag is set to YES, then doxygen will reuse the documentation of the first
# member in the group (if any) for the other members of the group. By default
# all members of a group must be documented explicitly.
DISTRIBUTE_GROUP_DOC = NO
# Set the SUBGROUPING tag to YES (the default) to allow class member groups of
# the same type (for instance a group of public functions) to be put as a
# subgroup of that type (e.g. under the Public Functions section). Set it to
# NO to prevent subgrouping. Alternatively, this can be done per class using
# the \nosubgrouping command.
SUBGROUPING = YES
# When the INLINE_GROUPED_CLASSES tag is set to YES, classes, structs and
# unions are shown inside the group in which they are included (e.g. using
# @ingroup) instead of on a separate page (for HTML and Man pages) or
# section (for LaTeX and RTF).
INLINE_GROUPED_CLASSES = NO
# When the INLINE_SIMPLE_STRUCTS tag is set to YES, structs, classes, and
# unions with only public data fields will be shown inline in the documentation
# of the scope in which they are defined (i.e. file, namespace, or group
# documentation), provided this scope is documented. If set to NO (the default),
# structs, classes, and unions are shown on a separate page (for HTML and Man
# pages) or section (for LaTeX and RTF).
INLINE_SIMPLE_STRUCTS = NO
# When TYPEDEF_HIDES_STRUCT is enabled, a typedef of a struct, union, or enum
# is documented as struct, union, or enum with the name of the typedef. So
# typedef struct TypeS {} TypeT, will appear in the documentation as a struct
# with name TypeT. When disabled the typedef will appear as a member of a file,
# namespace, or class. And the struct will be named TypeS. This can typically
# be useful for C code in case the coding convention dictates that all compound
# types are typedef'ed and only the typedef is referenced, never the tag name.
TYPEDEF_HIDES_STRUCT = NO
-# The SYMBOL_CACHE_SIZE determines the size of the internal cache use to
-# determine which symbols to keep in memory and which to flush to disk.
-# When the cache is full, less often used symbols will be written to disk.
-# For small to medium size projects (<1000 input files) the default value is
-# probably good enough. For larger projects a too small cache size can cause
-# doxygen to be busy swapping symbols to and from disk most of the time
-# causing a significant performance penalty.
-# If the system has enough physical memory increasing the cache will improve the
-# performance by keeping more symbols in memory. Note that the value works on
-# a logarithmic scale so increasing the size by one will roughly double the
-# memory usage. The cache size is given by this formula:
-# 2^(16+SYMBOL_CACHE_SIZE). The valid range is 0..9, the default is 0,
-# corresponding to a cache size of 2^16 = 65536 symbols.
-
-SYMBOL_CACHE_SIZE = 0
-
# Similar to the SYMBOL_CACHE_SIZE the size of the symbol lookup cache can be
# set using LOOKUP_CACHE_SIZE. This cache is used to resolve symbols given
# their name and scope. Since this can be an expensive process and often the
# same symbol appear multiple times in the code, doxygen keeps a cache of
# pre-resolved symbols. If the cache is too small doxygen will become slower.
# If the cache is too large, memory is wasted. The cache size is given by this
# formula: 2^(16+LOOKUP_CACHE_SIZE). The valid range is 0..9, the default is 0,
# corresponding to a cache size of 2^16 = 65536 symbols.
LOOKUP_CACHE_SIZE = 0
#---------------------------------------------------------------------------
# Build related configuration options
#---------------------------------------------------------------------------
# If the EXTRACT_ALL tag is set to YES doxygen will assume all entities in
# documentation are documented, even if no documentation was available.
# Private class members and static file members will be hidden unless
# the EXTRACT_PRIVATE and EXTRACT_STATIC tags are set to YES
EXTRACT_ALL = NO
# If the EXTRACT_PRIVATE tag is set to YES all private members of a class
# will be included in the documentation.
EXTRACT_PRIVATE = NO
# If the EXTRACT_STATIC tag is set to YES all static members of a file
# will be included in the documentation.
EXTRACT_STATIC = NO
# If the EXTRACT_LOCAL_CLASSES tag is set to YES classes (and structs)
# defined locally in source files will be included in the documentation.
# If set to NO only classes defined in header files are included.
EXTRACT_LOCAL_CLASSES = YES
# This flag is only useful for Objective-C code. When set to YES local
# methods, which are defined in the implementation section but not in
# the interface are included in the documentation.
# If set to NO (the default) only methods in the interface are included.
EXTRACT_LOCAL_METHODS = NO
# If this flag is set to YES, the members of anonymous namespaces will be
# extracted and appear in the documentation as a namespace called
# 'anonymous_namespace{file}', where file will be replaced with the base
# name of the file that contains the anonymous namespace. By default
# anonymous namespaces are hidden.
EXTRACT_ANON_NSPACES = NO
# If the HIDE_UNDOC_MEMBERS tag is set to YES, Doxygen will hide all
# undocumented members of documented classes, files or namespaces.
# If set to NO (the default) these members will be included in the
# various overviews, but no documentation section is generated.
# This option has no effect if EXTRACT_ALL is enabled.
HIDE_UNDOC_MEMBERS = NO
# If the HIDE_UNDOC_CLASSES tag is set to YES, Doxygen will hide all
# undocumented classes that are normally visible in the class hierarchy.
# If set to NO (the default) these classes will be included in the various
# overviews. This option has no effect if EXTRACT_ALL is enabled.
HIDE_UNDOC_CLASSES = NO
# If the HIDE_FRIEND_COMPOUNDS tag is set to YES, Doxygen will hide all
# friend (class|struct|union) declarations.
# If set to NO (the default) these declarations will be included in the
# documentation.
HIDE_FRIEND_COMPOUNDS = NO
# If the HIDE_IN_BODY_DOCS tag is set to YES, Doxygen will hide any
# documentation blocks found inside the body of a function.
# If set to NO (the default) these blocks will be appended to the
# function's detailed documentation block.
HIDE_IN_BODY_DOCS = NO
# The INTERNAL_DOCS tag determines if documentation
# that is typed after a \internal command is included. If the tag is set
# to NO (the default) then the documentation will be excluded.
# Set it to YES to include the internal documentation.
INTERNAL_DOCS = NO
# If the CASE_SENSE_NAMES tag is set to NO then Doxygen will only generate
# file names in lower-case letters. If set to YES upper-case letters are also
# allowed. This is useful if you have classes or files whose names only differ
# in case and if your file system supports case sensitive file names. Windows
# and Mac users are advised to set this option to NO.
CASE_SENSE_NAMES = NO
# If the HIDE_SCOPE_NAMES tag is set to NO (the default) then Doxygen
# will show members with their full class and namespace scopes in the
# documentation. If set to YES the scope will be hidden.
HIDE_SCOPE_NAMES = NO
# If the SHOW_INCLUDE_FILES tag is set to YES (the default) then Doxygen
# will put a list of the files that are included by a file in the documentation
# of that file.
SHOW_INCLUDE_FILES = YES
# If the FORCE_LOCAL_INCLUDES tag is set to YES then Doxygen
# will list include files with double quotes in the documentation
# rather than with sharp brackets.
FORCE_LOCAL_INCLUDES = NO
# If the INLINE_INFO tag is set to YES (the default) then a tag [inline]
# is inserted in the documentation for inline members.
INLINE_INFO = YES
# If the SORT_MEMBER_DOCS tag is set to YES (the default) then doxygen
# will sort the (detailed) documentation of file and class members
# alphabetically by member name. If set to NO the members will appear in
# declaration order.
SORT_MEMBER_DOCS = YES
# If the SORT_BRIEF_DOCS tag is set to YES then doxygen will sort the
# brief documentation of file, namespace and class members alphabetically
# by member name. If set to NO (the default) the members will appear in
# declaration order.
SORT_BRIEF_DOCS = NO
# If the SORT_MEMBERS_CTORS_1ST tag is set to YES then doxygen
# will sort the (brief and detailed) documentation of class members so that
# constructors and destructors are listed first. If set to NO (the default)
# the constructors will appear in the respective orders defined by
# SORT_MEMBER_DOCS and SORT_BRIEF_DOCS.
# This tag will be ignored for brief docs if SORT_BRIEF_DOCS is set to NO
# and ignored for detailed docs if SORT_MEMBER_DOCS is set to NO.
SORT_MEMBERS_CTORS_1ST = NO
# If the SORT_GROUP_NAMES tag is set to YES then doxygen will sort the
# hierarchy of group names into alphabetical order. If set to NO (the default)
# the group names will appear in their defined order.
SORT_GROUP_NAMES = NO
# If the SORT_BY_SCOPE_NAME tag is set to YES, the class list will be
# sorted by fully-qualified names, including namespaces. If set to
# NO (the default), the class list will be sorted only by class name,
# not including the namespace part.
# Note: This option is not very useful if HIDE_SCOPE_NAMES is set to YES.
# Note: This option applies only to the class list, not to the
# alphabetical list.
SORT_BY_SCOPE_NAME = NO
# If the STRICT_PROTO_MATCHING option is enabled and doxygen fails to
# do proper type resolution of all parameters of a function it will reject a
# match between the prototype and the implementation of a member function even
# if there is only one candidate or it is obvious which candidate to choose
# by doing a simple string match. By disabling STRICT_PROTO_MATCHING doxygen
# will still accept a match between prototype and implementation in such cases.
STRICT_PROTO_MATCHING = NO
# The GENERATE_TODOLIST tag can be used to enable (YES) or
# disable (NO) the todo list. This list is created by putting \todo
# commands in the documentation.
GENERATE_TODOLIST = YES
# The GENERATE_TESTLIST tag can be used to enable (YES) or
# disable (NO) the test list. This list is created by putting \test
# commands in the documentation.
GENERATE_TESTLIST = YES
# The GENERATE_BUGLIST tag can be used to enable (YES) or
# disable (NO) the bug list. This list is created by putting \bug
# commands in the documentation.
GENERATE_BUGLIST = YES
# The GENERATE_DEPRECATEDLIST tag can be used to enable (YES) or
# disable (NO) the deprecated list. This list is created by putting
# \deprecated commands in the documentation.
GENERATE_DEPRECATEDLIST= YES
# The ENABLED_SECTIONS tag can be used to enable conditional
# documentation sections, marked by \if sectionname ... \endif.
ENABLED_SECTIONS =
# The MAX_INITIALIZER_LINES tag determines the maximum number of lines
# the initial value of a variable or macro consists of for it to appear in
# the documentation. If the initializer consists of more lines than specified
# here it will be hidden. Use a value of 0 to hide initializers completely.
# The appearance of the initializer of individual variables and macros in the
# documentation can be controlled using \showinitializer or \hideinitializer
# command in the documentation regardless of this setting.
MAX_INITIALIZER_LINES = 30
# Set the SHOW_USED_FILES tag to NO to disable the list of files generated
# at the bottom of the documentation of classes and structs. If set to YES the
# list will mention the files that were used to generate the documentation.
SHOW_USED_FILES = YES
-# If the sources in your project are distributed over multiple directories
-# then setting the SHOW_DIRECTORIES tag to YES will show the directory hierarchy
-# in the documentation. The default is NO.
-
-SHOW_DIRECTORIES = NO
-
# Set the SHOW_FILES tag to NO to disable the generation of the Files page.
# This will remove the Files entry from the Quick Index and from the
# Folder Tree View (if specified). The default is YES.
SHOW_FILES = YES
# Set the SHOW_NAMESPACES tag to NO to disable the generation of the
# Namespaces page. This will remove the Namespaces entry from the Quick Index
# and from the Folder Tree View (if specified). The default is YES.
SHOW_NAMESPACES = YES
# The FILE_VERSION_FILTER tag can be used to specify a program or script that
# doxygen should invoke to get the current version for each file (typically from
# the version control system). Doxygen will invoke the program by executing (via
# popen()) the command <command> <input-file>, where <command> is the value of
# the FILE_VERSION_FILTER tag, and <input-file> is the name of an input file
# provided by doxygen. Whatever the program writes to standard output
# is used as the file version. See the manual for examples.
FILE_VERSION_FILTER =
# The LAYOUT_FILE tag can be used to specify a layout file which will be parsed
# by doxygen. The layout file controls the global structure of the generated
# output files in an output format independent way. The create the layout file
# that represents doxygen's defaults, run doxygen with the -l option.
# You can optionally specify a file name after the option, if omitted
# DoxygenLayout.xml will be used as the name of the layout file.
LAYOUT_FILE =
# The CITE_BIB_FILES tag can be used to specify one or more bib files
# containing the references data. This must be a list of .bib files. The
# .bib extension is automatically appended if omitted. Using this command
# requires the bibtex tool to be installed. See also
# http://en.wikipedia.org/wiki/BibTeX for more info. For LaTeX the style
# of the bibliography can be controlled using LATEX_BIB_STYLE. To use this
# feature you need bibtex and perl available in the search path.
CITE_BIB_FILES =
#---------------------------------------------------------------------------
# configuration options related to warning and progress messages
#---------------------------------------------------------------------------
# The QUIET tag can be used to turn on/off the messages that are generated
# by doxygen. Possible values are YES and NO. If left blank NO is used.
QUIET = YES
# The WARNINGS tag can be used to turn on/off the warning messages that are
# generated by doxygen. Possible values are YES and NO. If left blank
# NO is used.
WARNINGS = NO
# If WARN_IF_UNDOCUMENTED is set to YES, then doxygen will generate warnings
# for undocumented members. If EXTRACT_ALL is set to YES then this flag will
# automatically be disabled.
WARN_IF_UNDOCUMENTED = NO
# If WARN_IF_DOC_ERROR is set to YES, doxygen will generate warnings for
# potential errors in the documentation, such as not documenting some
# parameters in a documented function, or documenting parameters that
# don't exist or using markup commands wrongly.
WARN_IF_DOC_ERROR = NO
# The WARN_NO_PARAMDOC option can be enabled to get warnings for
# functions that are documented, but have no documentation for their parameters
# or return value. If set to NO (the default) doxygen will only warn about
# wrong or incomplete parameter documentation, but not about the absence of
# documentation.
WARN_NO_PARAMDOC = NO
# The WARN_FORMAT tag determines the format of the warning messages that
# doxygen can produce. The string should contain the $file, $line, and $text
# tags, which will be replaced by the file and line number from which the
# warning originated and the warning text. Optionally the format may contain
# $version, which will be replaced by the version of the file (if it could
# be obtained via FILE_VERSION_FILTER)
WARN_FORMAT = "$file:$line: $text"
# The WARN_LOGFILE tag can be used to specify a file to which warning
# and error messages should be written. If left blank the output is written
# to stderr.
WARN_LOGFILE =
#---------------------------------------------------------------------------
# configuration options related to the input files
#---------------------------------------------------------------------------
# The INPUT tag can be used to specify the files and/or directories that contain
# documented source files. You may enter file names like "myfile.cpp" or
# directories like "/usr/src/myproject". Separate the files or directories
# with spaces.
INPUT = @CMAKE_SOURCE_DIR@/src
# This tag can be used to specify the character encoding of the source files
# that doxygen parses. Internally doxygen uses the UTF-8 encoding, which is
# also the default input encoding. Doxygen uses libiconv (or the iconv built
# into libc) for the transcoding. See http://www.gnu.org/software/libiconv for
# the list of possible encodings.
INPUT_ENCODING = UTF-8
# If the value of the INPUT tag contains directories, you can use the
# FILE_PATTERNS tag to specify one or more wildcard pattern (like *.cpp
# and *.h) to filter out the source-files in the directories. If left
# blank the following patterns are tested:
# *.c *.cc *.cxx *.cpp *.c++ *.d *.java *.ii *.ixx *.ipp *.i++ *.inl *.h *.hh
# *.hxx *.hpp *.h++ *.idl *.odl *.cs *.php *.php3 *.inc *.m *.mm *.dox *.py
# *.f90 *.f *.for *.vhd *.vhdl
FILE_PATTERNS = *.c \
*.cc \
*.cxx \
*.cpp \
*.c++ \
*.d \
*.java \
*.ii \
*.ixx \
*.ipp \
*.i++ \
*.inl \
*.h \
*.hh \
*.hxx \
*.hpp \
*.h++ \
*.idl \
*.odl \
*.cs \
*.php \
*.php3 \
*.inc \
*.m \
*.mm \
*.dox \
*.py \
*.f90 \
*.f \
*.for \
*.vhd \
*.vhdl
# The RECURSIVE tag can be used to turn specify whether or not subdirectories
# should be searched for input files as well. Possible values are YES and NO.
# If left blank NO is used.
RECURSIVE = YES
# The EXCLUDE tag can be used to specify files and/or directories that should be
# excluded from the INPUT source files. This way you can easily exclude a
# subdirectory from a directory tree whose root is specified with the INPUT tag.
# Note that relative paths are relative to the directory from which doxygen is
# run.
EXCLUDE = @CMAKE_SOURCE_DIR@/src/aka_fwd.hh
# The EXCLUDE_SYMLINKS tag can be used to select whether or not files or
# directories that are symbolic links (a Unix file system feature) are excluded
# from the input.
EXCLUDE_SYMLINKS = NO
# If the value of the INPUT tag contains directories, you can use the
# EXCLUDE_PATTERNS tag to specify one or more wildcard patterns to exclude
# certain files from those directories. Note that the wildcards are matched
# against the file with absolute path, so to exclude all test directories
# for example use the pattern */test/*
EXCLUDE_PATTERNS =
# The EXCLUDE_SYMBOLS tag can be used to specify one or more symbol names
# (namespaces, classes, functions, etc.) that should be excluded from the
# output. The symbol name can be a fully qualified name, a word, or if the
# wildcard * is used, a substring. Examples: ANamespace, AClass,
# AClass::ANamespace, ANamespace::*Test
EXCLUDE_SYMBOLS =
# The EXAMPLE_PATH tag can be used to specify one or more files or
# directories that contain example code fragments that are included (see
# the \include command).
EXAMPLE_PATH = @CMAKE_SOURCE_DIR@/test
# If the value of the EXAMPLE_PATH tag contains directories, you can use the
# EXAMPLE_PATTERNS tag to specify one or more wildcard pattern (like *.cpp
# and *.h) to filter out the source-files in the directories. If left
# blank all files are included.
EXAMPLE_PATTERNS = *
# If the EXAMPLE_RECURSIVE tag is set to YES then subdirectories will be
# searched for input files to be used with the \include or \dontinclude
# commands irrespective of the value of the RECURSIVE tag.
# Possible values are YES and NO. If left blank NO is used.
EXAMPLE_RECURSIVE = NO
# The IMAGE_PATH tag can be used to specify one or more files or
# directories that contain image that are included in the documentation (see
# the \image command).
IMAGE_PATH =
# The INPUT_FILTER tag can be used to specify a program that doxygen should
# invoke to filter for each input file. Doxygen will invoke the filter program
# by executing (via popen()) the command <filter> <input-file>, where <filter>
# is the value of the INPUT_FILTER tag, and <input-file> is the name of an
# input file. Doxygen will then use the output that the filter program writes
# to standard output. If FILTER_PATTERNS is specified, this tag will be
# ignored.
INPUT_FILTER =
# The FILTER_PATTERNS tag can be used to specify filters on a per file pattern
# basis. Doxygen will compare the file name with each pattern and apply the
# filter if there is a match. The filters are a list of the form:
# pattern=filter (like *.cpp=my_cpp_filter). See INPUT_FILTER for further
# info on how filters are used. If FILTER_PATTERNS is empty or if
# non of the patterns match the file name, INPUT_FILTER is applied.
FILTER_PATTERNS =
# If the FILTER_SOURCE_FILES tag is set to YES, the input filter (if set using
# INPUT_FILTER) will be used to filter the input files when producing source
# files to browse (i.e. when SOURCE_BROWSER is set to YES).
FILTER_SOURCE_FILES = NO
# The FILTER_SOURCE_PATTERNS tag can be used to specify source filters per file
# pattern. A pattern will override the setting for FILTER_PATTERN (if any)
# and it is also possible to disable source filtering for a specific pattern
# using *.ext= (so without naming a filter). This option only has effect when
# FILTER_SOURCE_FILES is enabled.
FILTER_SOURCE_PATTERNS =
#---------------------------------------------------------------------------
# configuration options related to source browsing
#---------------------------------------------------------------------------
# If the SOURCE_BROWSER tag is set to YES then a list of source files will
# be generated. Documented entities will be cross-referenced with these sources.
# Note: To get rid of all source code in the generated output, make sure also
# VERBATIM_HEADERS is set to NO.
SOURCE_BROWSER = YES
# Setting the INLINE_SOURCES tag to YES will include the body
# of functions and classes directly in the documentation.
INLINE_SOURCES = NO
# Setting the STRIP_CODE_COMMENTS tag to YES (the default) will instruct
# doxygen to hide any special comment blocks from generated source code
# fragments. Normal C and C++ comments will always remain visible.
STRIP_CODE_COMMENTS = YES
# If the REFERENCED_BY_RELATION tag is set to YES
# then for each documented function all documented
# functions referencing it will be listed.
REFERENCED_BY_RELATION = NO
# If the REFERENCES_RELATION tag is set to YES
# then for each documented function all documented entities
# called/used by that function will be listed.
REFERENCES_RELATION = NO
# If the REFERENCES_LINK_SOURCE tag is set to YES (the default)
# and SOURCE_BROWSER tag is set to YES, then the hyperlinks from
# functions in REFERENCES_RELATION and REFERENCED_BY_RELATION lists will
# link to the source code. Otherwise they will link to the documentation.
REFERENCES_LINK_SOURCE = YES
# If the USE_HTAGS tag is set to YES then the references to source code
# will point to the HTML generated by the htags(1) tool instead of doxygen
# built-in source browser. The htags tool is part of GNU's global source
# tagging system (see http://www.gnu.org/software/global/global.html). You
# will need version 4.8.6 or higher.
USE_HTAGS = NO
# If the VERBATIM_HEADERS tag is set to YES (the default) then Doxygen
# will generate a verbatim copy of the header file for each class for
# which an include is specified. Set to NO to disable this.
VERBATIM_HEADERS = YES
#---------------------------------------------------------------------------
# configuration options related to the alphabetical class index
#---------------------------------------------------------------------------
# If the ALPHABETICAL_INDEX tag is set to YES, an alphabetical index
# of all compounds will be generated. Enable this if the project
# contains a lot of classes, structs, unions or interfaces.
ALPHABETICAL_INDEX = YES
# If the alphabetical index is enabled (see ALPHABETICAL_INDEX) then
# the COLS_IN_ALPHA_INDEX tag can be used to specify the number of columns
# in which this list will be split (can be a number in the range [1..20])
COLS_IN_ALPHA_INDEX = 5
# In case all classes in a project start with a common prefix, all
# classes will be put under the same header in the alphabetical index.
# The IGNORE_PREFIX tag can be used to specify one or more prefixes that
# should be ignored while generating the index headers.
IGNORE_PREFIX =
#---------------------------------------------------------------------------
# configuration options related to the HTML output
#---------------------------------------------------------------------------
# If the GENERATE_HTML tag is set to YES (the default) Doxygen will
# generate HTML output.
GENERATE_HTML = YES
# The HTML_OUTPUT tag is used to specify where the HTML docs will be put.
# If a relative path is entered the value of OUTPUT_DIRECTORY will be
# put in front of it. If left blank `html' will be used as the default path.
HTML_OUTPUT = html
# The HTML_FILE_EXTENSION tag can be used to specify the file extension for
# each generated HTML page (for example: .htm,.php,.asp). If it is left blank
# doxygen will generate files with .html extension.
HTML_FILE_EXTENSION = .html
# The HTML_HEADER tag can be used to specify a personal HTML header for
# each generated HTML page. If it is left blank doxygen will generate a
# standard header. Note that when using a custom header you are responsible
# for the proper inclusion of any scripts and style sheets that doxygen
# needs, which is dependent on the configuration options used.
# It is advised to generate a default header using "doxygen -w html
# header.html footer.html stylesheet.css YourConfigFile" and then modify
# that header. Note that the header is subject to change so you typically
# have to redo this when upgrading to a newer version of doxygen or when
# changing the value of configuration settings such as GENERATE_TREEVIEW!
HTML_HEADER =
# The HTML_FOOTER tag can be used to specify a personal HTML footer for
# each generated HTML page. If it is left blank doxygen will generate a
# standard footer.
HTML_FOOTER =
# The HTML_STYLESHEET tag can be used to specify a user-defined cascading
# style sheet that is used by each HTML page. It can be used to
# fine-tune the look of the HTML output. If the tag is left blank doxygen
# will generate a default style sheet. Note that doxygen will try to copy
# the style sheet file to the HTML output directory, so don't put your own
# style sheet in the HTML output directory as well, or it will be erased!
HTML_STYLESHEET =
# The HTML_EXTRA_FILES tag can be used to specify one or more extra images or
# other source files which should be copied to the HTML output directory. Note
# that these files will be copied to the base HTML output directory. Use the
# $relpath$ marker in the HTML_HEADER and/or HTML_FOOTER files to load these
# files. In the HTML_STYLESHEET file, use the file name only. Also note that
# the files will be copied as-is; there are no commands or markers available.
HTML_EXTRA_FILES =
# The HTML_COLORSTYLE_HUE tag controls the color of the HTML output.
# Doxygen will adjust the colors in the style sheet and background images
# according to this color. Hue is specified as an angle on a colorwheel,
# see http://en.wikipedia.org/wiki/Hue for more information.
# For instance the value 0 represents red, 60 is yellow, 120 is green,
# 180 is cyan, 240 is blue, 300 purple, and 360 is red again.
# The allowed range is 0 to 359.
HTML_COLORSTYLE_HUE = 220
# The HTML_COLORSTYLE_SAT tag controls the purity (or saturation) of
# the colors in the HTML output. For a value of 0 the output will use
# grayscales only. A value of 255 will produce the most vivid colors.
HTML_COLORSTYLE_SAT = 100
# The HTML_COLORSTYLE_GAMMA tag controls the gamma correction applied to
# the luminance component of the colors in the HTML output. Values below
# 100 gradually make the output lighter, whereas values above 100 make
# the output darker. The value divided by 100 is the actual gamma applied,
# so 80 represents a gamma of 0.8, The value 220 represents a gamma of 2.2,
# and 100 does not change the gamma.
HTML_COLORSTYLE_GAMMA = 80
# If the HTML_TIMESTAMP tag is set to YES then the footer of each generated HTML
# page will contain the date and time when the page was generated. Setting
# this to NO can help when comparing the output of multiple runs.
HTML_TIMESTAMP = YES
-# If the HTML_ALIGN_MEMBERS tag is set to YES, the members of classes,
-# files or namespaces will be aligned in HTML using tables. If set to
-# NO a bullet list will be used.
-
-HTML_ALIGN_MEMBERS = YES
-
# If the HTML_DYNAMIC_SECTIONS tag is set to YES then the generated HTML
# documentation will contain sections that can be hidden and shown after the
# page has loaded. For this to work a browser that supports
# JavaScript and DHTML is required (for instance Mozilla 1.0+, Firefox
# Netscape 6.0+, Internet explorer 5.0+, Konqueror, or Safari).
HTML_DYNAMIC_SECTIONS = NO
# If the GENERATE_DOCSET tag is set to YES, additional index files
# will be generated that can be used as input for Apple's Xcode 3
# integrated development environment, introduced with OSX 10.5 (Leopard).
# To create a documentation set, doxygen will generate a Makefile in the
# HTML output directory. Running make will produce the docset in that
# directory and running "make install" will install the docset in
# ~/Library/Developer/Shared/Documentation/DocSets so that Xcode will find
# it at startup.
# See http://developer.apple.com/tools/creatingdocsetswithdoxygen.html
# for more information.
GENERATE_DOCSET = NO
# When GENERATE_DOCSET tag is set to YES, this tag determines the name of the
# feed. A documentation feed provides an umbrella under which multiple
# documentation sets from a single provider (such as a company or product suite)
# can be grouped.
DOCSET_FEEDNAME = "Doxygen generated docs"
# When GENERATE_DOCSET tag is set to YES, this tag specifies a string that
# should uniquely identify the documentation set bundle. This should be a
# reverse domain-name style string, e.g. com.mycompany.MyDocSet. Doxygen
# will append .docset to the name.
DOCSET_BUNDLE_ID = org.doxygen.Project
# When GENERATE_PUBLISHER_ID tag specifies a string that should uniquely identify
# the documentation publisher. This should be a reverse domain-name style
# string, e.g. com.mycompany.MyDocSet.documentation.
DOCSET_PUBLISHER_ID = org.doxygen.Publisher
# The GENERATE_PUBLISHER_NAME tag identifies the documentation publisher.
DOCSET_PUBLISHER_NAME = Publisher
# If the GENERATE_HTMLHELP tag is set to YES, additional index files
# will be generated that can be used as input for tools like the
# Microsoft HTML help workshop to generate a compiled HTML help file (.chm)
# of the generated HTML documentation.
GENERATE_HTMLHELP = NO
# If the GENERATE_HTMLHELP tag is set to YES, the CHM_FILE tag can
# be used to specify the file name of the resulting .chm file. You
# can add a path in front of the file if the result should not be
# written to the html output directory.
CHM_FILE =
# If the GENERATE_HTMLHELP tag is set to YES, the HHC_LOCATION tag can
# be used to specify the location (absolute path including file name) of
# the HTML help compiler (hhc.exe). If non-empty doxygen will try to run
# the HTML help compiler on the generated index.hhp.
HHC_LOCATION =
# If the GENERATE_HTMLHELP tag is set to YES, the GENERATE_CHI flag
# controls if a separate .chi index file is generated (YES) or that
# it should be included in the master .chm file (NO).
GENERATE_CHI = NO
# If the GENERATE_HTMLHELP tag is set to YES, the CHM_INDEX_ENCODING
# is used to encode HtmlHelp index (hhk), content (hhc) and project file
# content.
CHM_INDEX_ENCODING =
# If the GENERATE_HTMLHELP tag is set to YES, the BINARY_TOC flag
# controls whether a binary table of contents is generated (YES) or a
# normal table of contents (NO) in the .chm file.
BINARY_TOC = NO
# The TOC_EXPAND flag can be set to YES to add extra items for group members
# to the contents of the HTML help documentation and to the tree view.
TOC_EXPAND = NO
# If the GENERATE_QHP tag is set to YES and both QHP_NAMESPACE and
# QHP_VIRTUAL_FOLDER are set, an additional index file will be generated
# that can be used as input for Qt's qhelpgenerator to generate a
# Qt Compressed Help (.qch) of the generated HTML documentation.
GENERATE_QHP = NO
# If the QHG_LOCATION tag is specified, the QCH_FILE tag can
# be used to specify the file name of the resulting .qch file.
# The path specified is relative to the HTML output folder.
QCH_FILE =
# The QHP_NAMESPACE tag specifies the namespace to use when generating
# Qt Help Project output. For more information please see
# http://doc.trolltech.com/qthelpproject.html#namespace
QHP_NAMESPACE = org.doxygen.Project
# The QHP_VIRTUAL_FOLDER tag specifies the namespace to use when generating
# Qt Help Project output. For more information please see
# http://doc.trolltech.com/qthelpproject.html#virtual-folders
QHP_VIRTUAL_FOLDER = doc
# If QHP_CUST_FILTER_NAME is set, it specifies the name of a custom filter to
# add. For more information please see
# http://doc.trolltech.com/qthelpproject.html#custom-filters
QHP_CUST_FILTER_NAME =
# The QHP_CUST_FILT_ATTRS tag specifies the list of the attributes of the
# custom filter to add. For more information please see
# <a href="http://doc.trolltech.com/qthelpproject.html#custom-filters">
# Qt Help Project / Custom Filters</a>.
QHP_CUST_FILTER_ATTRS =
# The QHP_SECT_FILTER_ATTRS tag specifies the list of the attributes this
# project's
# filter section matches.
# <a href="http://doc.trolltech.com/qthelpproject.html#filter-attributes">
# Qt Help Project / Filter Attributes</a>.
QHP_SECT_FILTER_ATTRS =
# If the GENERATE_QHP tag is set to YES, the QHG_LOCATION tag can
# be used to specify the location of Qt's qhelpgenerator.
# If non-empty doxygen will try to run qhelpgenerator on the generated
# .qhp file.
QHG_LOCATION =
# If the GENERATE_ECLIPSEHELP tag is set to YES, additional index files
# will be generated, which together with the HTML files, form an Eclipse help
# plugin. To install this plugin and make it available under the help contents
# menu in Eclipse, the contents of the directory containing the HTML and XML
# files needs to be copied into the plugins directory of eclipse. The name of
# the directory within the plugins directory should be the same as
# the ECLIPSE_DOC_ID value. After copying Eclipse needs to be restarted before
# the help appears.
GENERATE_ECLIPSEHELP = NO
# A unique identifier for the eclipse help plugin. When installing the plugin
# the directory name containing the HTML and XML files should also have
# this name.
ECLIPSE_DOC_ID = org.doxygen.Project
# The DISABLE_INDEX tag can be used to turn on/off the condensed index (tabs)
# at top of each HTML page. The value NO (the default) enables the index and
# the value YES disables it. Since the tabs have the same information as the
# navigation tree you can set this option to NO if you already set
# GENERATE_TREEVIEW to YES.
DISABLE_INDEX = NO
# The GENERATE_TREEVIEW tag is used to specify whether a tree-like index
# structure should be generated to display hierarchical information.
# If the tag value is set to YES, a side panel will be generated
# containing a tree-like index structure (just like the one that
# is generated for HTML Help). For this to work a browser that supports
# JavaScript, DHTML, CSS and frames is required (i.e. any modern browser).
# Windows users are probably better off using the HTML help feature.
# Since the tree basically has the same information as the tab index you
# could consider to set DISABLE_INDEX to NO when enabling this option.
GENERATE_TREEVIEW = NO
# The ENUM_VALUES_PER_LINE tag can be used to set the number of enum values
# (range [0,1..20]) that doxygen will group on one line in the generated HTML
# documentation. Note that a value of 0 will completely suppress the enum
# values from appearing in the overview section.
ENUM_VALUES_PER_LINE = 4
-# By enabling USE_INLINE_TREES, doxygen will generate the Groups, Directories,
-# and Class Hierarchy pages using a tree view instead of an ordered list.
-
-USE_INLINE_TREES = NO
-
# If the treeview is enabled (see GENERATE_TREEVIEW) then this tag can be
# used to set the initial width (in pixels) of the frame in which the tree
# is shown.
TREEVIEW_WIDTH = 250
# When the EXT_LINKS_IN_WINDOW option is set to YES doxygen will open
# links to external symbols imported via tag files in a separate window.
EXT_LINKS_IN_WINDOW = NO
# Use this tag to change the font size of Latex formulas included
# as images in the HTML documentation. The default is 10. Note that
# when you change the font size after a successful doxygen run you need
# to manually remove any form_*.png images from the HTML output directory
# to force them to be regenerated.
FORMULA_FONTSIZE = 10
# Use the FORMULA_TRANPARENT tag to determine whether or not the images
# generated for formulas are transparent PNGs. Transparent PNGs are
# not supported properly for IE 6.0, but are supported on all modern browsers.
# Note that when changing this option you need to delete any form_*.png files
# in the HTML output before the changes have effect.
FORMULA_TRANSPARENT = YES
# Enable the USE_MATHJAX option to render LaTeX formulas using MathJax
# (see http://www.mathjax.org) which uses client side Javascript for the
# rendering instead of using prerendered bitmaps. Use this if you do not
# have LaTeX installed or if you want to formulas look prettier in the HTML
# output. When enabled you also need to install MathJax separately and
# configure the path to it using the MATHJAX_RELPATH option.
USE_MATHJAX = NO
# When MathJax is enabled you need to specify the location relative to the
# HTML output directory using the MATHJAX_RELPATH option. The destination
# directory should contain the MathJax.js script. For instance, if the mathjax
# directory is located at the same level as the HTML output directory, then
# MATHJAX_RELPATH should be ../mathjax. The default value points to the
# mathjax.org site, so you can quickly see the result without installing
# MathJax, but it is strongly recommended to install a local copy of MathJax
# before deployment.
MATHJAX_RELPATH = http://www.mathjax.org/mathjax
# The MATHJAX_EXTENSIONS tag can be used to specify one or MathJax extension
# names that should be enabled during MathJax rendering.
MATHJAX_EXTENSIONS =
# When the SEARCHENGINE tag is enabled doxygen will generate a search box
# for the HTML output. The underlying search engine uses javascript
# and DHTML and should work on any modern browser. Note that when using
# HTML help (GENERATE_HTMLHELP), Qt help (GENERATE_QHP), or docsets
# (GENERATE_DOCSET) there is already a search function so this one should
# typically be disabled. For large projects the javascript based search engine
# can be slow, then enabling SERVER_BASED_SEARCH may provide a better solution.
SEARCHENGINE = YES
# When the SERVER_BASED_SEARCH tag is enabled the search engine will be
# implemented using a PHP enabled web server instead of at the web client
# using Javascript. Doxygen will generate the search PHP script and index
# file to put on the web server. The advantage of the server
# based approach is that it scales better to large projects and allows
# full text search. The disadvantages are that it is more difficult to setup
# and does not have live searching capabilities.
SERVER_BASED_SEARCH = NO
#---------------------------------------------------------------------------
# configuration options related to the LaTeX output
#---------------------------------------------------------------------------
# If the GENERATE_LATEX tag is set to YES (the default) Doxygen will
# generate Latex output.
GENERATE_LATEX = NO
# The LATEX_OUTPUT tag is used to specify where the LaTeX docs will be put.
# If a relative path is entered the value of OUTPUT_DIRECTORY will be
# put in front of it. If left blank `latex' will be used as the default path.
LATEX_OUTPUT = latex
# The LATEX_CMD_NAME tag can be used to specify the LaTeX command name to be
# invoked. If left blank `latex' will be used as the default command name.
# Note that when enabling USE_PDFLATEX this option is only used for
# generating bitmaps for formulas in the HTML output, but not in the
# Makefile that is written to the output directory.
LATEX_CMD_NAME = latex
# The MAKEINDEX_CMD_NAME tag can be used to specify the command name to
# generate index for LaTeX. If left blank `makeindex' will be used as the
# default command name.
MAKEINDEX_CMD_NAME = makeindex
# If the COMPACT_LATEX tag is set to YES Doxygen generates more compact
# LaTeX documents. This may be useful for small projects and may help to
# save some trees in general.
COMPACT_LATEX = NO
# The PAPER_TYPE tag can be used to set the paper type that is used
# by the printer. Possible values are: a4, letter, legal and
# executive. If left blank a4wide will be used.
PAPER_TYPE = a4
# The EXTRA_PACKAGES tag can be to specify one or more names of LaTeX
# packages that should be included in the LaTeX output.
-EXTRA_PACKAGES =
+EXTRA_PACKAGES = amsmath
# The LATEX_HEADER tag can be used to specify a personal LaTeX header for
# the generated latex document. The header should contain everything until
# the first chapter. If it is left blank doxygen will generate a
# standard header. Notice: only use this tag if you know what you are doing!
LATEX_HEADER =
# The LATEX_FOOTER tag can be used to specify a personal LaTeX footer for
# the generated latex document. The footer should contain everything after
# the last chapter. If it is left blank doxygen will generate a
# standard footer. Notice: only use this tag if you know what you are doing!
LATEX_FOOTER =
# If the PDF_HYPERLINKS tag is set to YES, the LaTeX that is generated
# is prepared for conversion to pdf (using ps2pdf). The pdf file will
# contain links (just like the HTML output) instead of page references
# This makes the output suitable for online browsing using a pdf viewer.
PDF_HYPERLINKS = YES
# If the USE_PDFLATEX tag is set to YES, pdflatex will be used instead of
# plain latex in the generated Makefile. Set this option to YES to get a
# higher quality PDF documentation.
USE_PDFLATEX = YES
# If the LATEX_BATCHMODE tag is set to YES, doxygen will add the \\batchmode.
# command to the generated LaTeX files. This will instruct LaTeX to keep
# running if errors occur, instead of asking the user for help.
# This option is also used when generating formulas in HTML.
-LATEX_BATCHMODE = NO
+LATEX_BATCHMODE = YES
# If LATEX_HIDE_INDICES is set to YES then doxygen will not
# include the index chapters (such as File Index, Compound Index, etc.)
# in the output.
LATEX_HIDE_INDICES = NO
# If LATEX_SOURCE_CODE is set to YES then doxygen will include
# source code with syntax highlighting in the LaTeX output.
# Note that which sources are shown also depends on other settings
# such as SOURCE_BROWSER.
LATEX_SOURCE_CODE = YES
# The LATEX_BIB_STYLE tag can be used to specify the style to use for the
# bibliography, e.g. plainnat, or ieeetr. The default style is "plain". See
# http://en.wikipedia.org/wiki/BibTeX for more info.
LATEX_BIB_STYLE = plain
#---------------------------------------------------------------------------
# configuration options related to the RTF output
#---------------------------------------------------------------------------
# If the GENERATE_RTF tag is set to YES Doxygen will generate RTF output
# The RTF output is optimized for Word 97 and may not look very pretty with
# other RTF readers or editors.
GENERATE_RTF = NO
# The RTF_OUTPUT tag is used to specify where the RTF docs will be put.
# If a relative path is entered the value of OUTPUT_DIRECTORY will be
# put in front of it. If left blank `rtf' will be used as the default path.
RTF_OUTPUT = rtf
# If the COMPACT_RTF tag is set to YES Doxygen generates more compact
# RTF documents. This may be useful for small projects and may help to
# save some trees in general.
COMPACT_RTF = NO
# If the RTF_HYPERLINKS tag is set to YES, the RTF that is generated
# will contain hyperlink fields. The RTF file will
# contain links (just like the HTML output) instead of page references.
# This makes the output suitable for online browsing using WORD or other
# programs which support those fields.
# Note: wordpad (write) and others do not support links.
RTF_HYPERLINKS = NO
# Load style sheet definitions from file. Syntax is similar to doxygen's
# config file, i.e. a series of assignments. You only have to provide
# replacements, missing definitions are set to their default value.
RTF_STYLESHEET_FILE =
# Set optional variables used in the generation of an rtf document.
# Syntax is similar to doxygen's config file.
RTF_EXTENSIONS_FILE =
#---------------------------------------------------------------------------
# configuration options related to the man page output
#---------------------------------------------------------------------------
# If the GENERATE_MAN tag is set to YES (the default) Doxygen will
# generate man pages
GENERATE_MAN = YES
# The MAN_OUTPUT tag is used to specify where the man pages will be put.
# If a relative path is entered the value of OUTPUT_DIRECTORY will be
# put in front of it. If left blank `man' will be used as the default path.
MAN_OUTPUT = man
# The MAN_EXTENSION tag determines the extension that is added to
# the generated man pages (default is the subroutine's section .3)
MAN_EXTENSION = .3
# If the MAN_LINKS tag is set to YES and Doxygen generates man output,
# then it will generate one additional man file for each entity
# documented in the real man page(s). These additional files
# only source the real man page, but without them the man command
# would be unable to find the correct page. The default is NO.
MAN_LINKS = NO
#---------------------------------------------------------------------------
# configuration options related to the XML output
#---------------------------------------------------------------------------
# If the GENERATE_XML tag is set to YES Doxygen will
# generate an XML file that captures the structure of
# the code including all documentation.
GENERATE_XML = NO
# The XML_OUTPUT tag is used to specify where the XML pages will be put.
# If a relative path is entered the value of OUTPUT_DIRECTORY will be
# put in front of it. If left blank `xml' will be used as the default path.
XML_OUTPUT = xml
-# The XML_SCHEMA tag can be used to specify an XML schema,
-# which can be used by a validating XML parser to check the
-# syntax of the XML files.
-
-XML_SCHEMA =
-
-# The XML_DTD tag can be used to specify an XML DTD,
-# which can be used by a validating XML parser to check the
-# syntax of the XML files.
-
-XML_DTD =
-
# If the XML_PROGRAMLISTING tag is set to YES Doxygen will
# dump the program listings (including syntax highlighting
# and cross-referencing information) to the XML output. Note that
# enabling this will significantly increase the size of the XML output.
XML_PROGRAMLISTING = YES
#---------------------------------------------------------------------------
# configuration options for the AutoGen Definitions output
#---------------------------------------------------------------------------
# If the GENERATE_AUTOGEN_DEF tag is set to YES Doxygen will
# generate an AutoGen Definitions (see autogen.sf.net) file
# that captures the structure of the code including all
# documentation. Note that this feature is still experimental
# and incomplete at the moment.
GENERATE_AUTOGEN_DEF = NO
#---------------------------------------------------------------------------
# configuration options related to the Perl module output
#---------------------------------------------------------------------------
# If the GENERATE_PERLMOD tag is set to YES Doxygen will
# generate a Perl module file that captures the structure of
# the code including all documentation. Note that this
# feature is still experimental and incomplete at the
# moment.
GENERATE_PERLMOD = NO
# If the PERLMOD_LATEX tag is set to YES Doxygen will generate
# the necessary Makefile rules, Perl scripts and LaTeX code to be able
# to generate PDF and DVI output from the Perl module output.
PERLMOD_LATEX = NO
# If the PERLMOD_PRETTY tag is set to YES the Perl module output will be
# nicely formatted so it can be parsed by a human reader. This is useful
# if you want to understand what is going on. On the other hand, if this
# tag is set to NO the size of the Perl module output will be much smaller
# and Perl will parse it just the same.
PERLMOD_PRETTY = YES
# The names of the make variables in the generated doxyrules.make file
# are prefixed with the string contained in PERLMOD_MAKEVAR_PREFIX.
# This is useful so different doxyrules.make files included by the same
# Makefile don't overwrite each other's variables.
PERLMOD_MAKEVAR_PREFIX =
#---------------------------------------------------------------------------
# Configuration options related to the preprocessor
#---------------------------------------------------------------------------
# If the ENABLE_PREPROCESSING tag is set to YES (the default) Doxygen will
# evaluate all C-preprocessor directives found in the sources and include
# files.
ENABLE_PREPROCESSING = YES
# If the MACRO_EXPANSION tag is set to YES Doxygen will expand all macro
# names in the source code. If set to NO (the default) only conditional
# compilation will be performed. Macro expansion can be done in a controlled
# way by setting EXPAND_ONLY_PREDEF to YES.
MACRO_EXPANSION = YES
# If the EXPAND_ONLY_PREDEF and MACRO_EXPANSION tags are both set to YES
# then the macro expansion is limited to the macros specified with the
# PREDEFINED and EXPAND_AS_DEFINED tags.
EXPAND_ONLY_PREDEF = NO
# If the SEARCH_INCLUDES tag is set to YES (the default) the includes files
# pointed to by INCLUDE_PATH will be searched when a #include is found.
SEARCH_INCLUDES = YES
# The INCLUDE_PATH tag can be used to specify one or more directories that
# contain include files that are not input files but should be processed by
# the preprocessor.
INCLUDE_PATH = @AKANTU_DOXYGEN_INCLUDE_DIRS@
# You can use the INCLUDE_FILE_PATTERNS tag to specify one or more wildcard
# patterns (like *.h and *.hpp) to filter out the header-files in the
# directories. If left blank, the patterns specified with FILE_PATTERNS will
# be used.
INCLUDE_FILE_PATTERNS = *.hh
# The PREDEFINED tag can be used to specify one or more macro names that
# are defined before the preprocessor is started (similar to the -D option of
# gcc). The argument of the tag is a list of macros of the form: name
# or name=definition (no spaces). If the definition and the = are
# omitted =1 is assumed. To prevent a macro definition from being
# undefined via #undef or recursively expanded use the := operator
# instead of the = operator.
PREDEFINED = @AKANTU_DOXYGEN_DEFINTIONS@
# If the MACRO_EXPANSION and EXPAND_ONLY_PREDEF tags are set to YES then
# this tag can be used to specify a list of macro names that should be expanded.
# The macro definition that is found in the sources will be used.
# Use the PREDEFINED tag if you want to use a different macro definition that
# overrules the definition found in the source code.
EXPAND_AS_DEFINED = __BEGIN_AKANTU__ \
__END_AKANTU__ \
AKANTU_GET_MACRO \
AKANTU_SET_MACRO \
AKANTU_GET_MACRO_NOT_CONST \
AKANTU_GET_MACRO_BY_ELEMENT_TYPE
# If the SKIP_FUNCTION_MACROS tag is set to YES (the default) then
# doxygen's preprocessor will remove all references to function-like macros
# that are alone on a line, have an all uppercase name, and do not end with a
# semicolon, because these will confuse the parser if not removed.
SKIP_FUNCTION_MACROS = YES
#---------------------------------------------------------------------------
# Configuration::additions related to external references
#---------------------------------------------------------------------------
# The TAGFILES option can be used to specify one or more tagfiles.
# Optionally an initial location of the external documentation
# can be added for each tagfile. The format of a tag file without
# this location is as follows:
# TAGFILES = file1 file2 ...
# Adding location for the tag files is done as follows:
# TAGFILES = file1=loc1 "file2 = loc2" ...
# where "loc1" and "loc2" can be relative or absolute paths or
# URLs. If a location is present for each tag, the installdox tool
# does not have to be run to correct the links.
# Note that each tag file must have a unique name
# (where the name does NOT include the path)
# If a tag file is not located in the directory in which doxygen
# is run, you must also specify the path to the tagfile here.
TAGFILES =
# When a file name is specified after GENERATE_TAGFILE, doxygen will create
# a tag file that is based on the input files it reads.
GENERATE_TAGFILE =
# If the ALLEXTERNALS tag is set to YES all external classes will be listed
# in the class index. If set to NO only the inherited external classes
# will be listed.
ALLEXTERNALS = NO
# If the EXTERNAL_GROUPS tag is set to YES all external groups will be listed
# in the modules index. If set to NO, only the current project's groups will
# be listed.
EXTERNAL_GROUPS = YES
# The PERL_PATH should be the absolute path and name of the perl script
# interpreter (i.e. the result of `which perl').
PERL_PATH = /usr/bin/perl
#---------------------------------------------------------------------------
# Configuration options related to the dot tool
#---------------------------------------------------------------------------
# If the CLASS_DIAGRAMS tag is set to YES (the default) Doxygen will
# generate a inheritance diagram (in HTML, RTF and LaTeX) for classes with base
# or super classes. Setting the tag to NO turns the diagrams off. Note that
# this option also works with HAVE_DOT disabled, but it is recommended to
# install and use dot, since it yields more powerful graphs.
CLASS_DIAGRAMS = YES
# You can define message sequence charts within doxygen comments using the \msc
# command. Doxygen will then run the mscgen tool (see
# http://www.mcternan.me.uk/mscgen/) to produce the chart and insert it in the
# documentation. The MSCGEN_PATH tag allows you to specify the directory where
# the mscgen tool resides. If left empty the tool is assumed to be found in the
# default search path.
MSCGEN_PATH =
# If set to YES, the inheritance and collaboration graphs will hide
# inheritance and usage relations if the target is undocumented
# or is not a class.
HIDE_UNDOC_RELATIONS = YES
# If you set the HAVE_DOT tag to YES then doxygen will assume the dot tool is
# available from the path. This tool is part of Graphviz, a graph visualization
# toolkit from AT&T and Lucent Bell Labs. The other options in this section
# have no effect if this option is set to NO (the default)
HAVE_DOT = YES
# The DOT_NUM_THREADS specifies the number of dot invocations doxygen is
# allowed to run in parallel. When set to 0 (the default) doxygen will
# base this on the number of processors available in the system. You can set it
# explicitly to a value larger than 0 to get control over the balance
# between CPU load and processing speed.
DOT_NUM_THREADS = 0
# By default doxygen will use the Helvetica font for all dot files that
# doxygen generates. When you want a differently looking font you can specify
# the font name using DOT_FONTNAME. You need to make sure dot is able to find
# the font, which can be done by putting it in a standard location or by setting
# the DOTFONTPATH environment variable or by setting DOT_FONTPATH to the
# directory containing the font.
DOT_FONTNAME = Helvetica
# The DOT_FONTSIZE tag can be used to set the size of the font of dot graphs.
# The default size is 10pt.
DOT_FONTSIZE = 10
# By default doxygen will tell dot to use the Helvetica font.
# If you specify a different font using DOT_FONTNAME you can use DOT_FONTPATH to
# set the path where dot can find it.
DOT_FONTPATH =
# If the CLASS_GRAPH and HAVE_DOT tags are set to YES then doxygen
# will generate a graph for each documented class showing the direct and
# indirect inheritance relations. Setting this tag to YES will force the
# CLASS_DIAGRAMS tag to NO.
CLASS_GRAPH = YES
# If the COLLABORATION_GRAPH and HAVE_DOT tags are set to YES then doxygen
# will generate a graph for each documented class showing the direct and
# indirect implementation dependencies (inheritance, containment, and
# class references variables) of the class with other documented classes.
COLLABORATION_GRAPH = NO
# If the GROUP_GRAPHS and HAVE_DOT tags are set to YES then doxygen
# will generate a graph for groups, showing the direct groups dependencies
GROUP_GRAPHS = YES
# If the UML_LOOK tag is set to YES doxygen will generate inheritance and
# collaboration diagrams in a style similar to the OMG's Unified Modeling
# Language.
UML_LOOK = YES
# If set to YES, the inheritance and collaboration graphs will show the
# relations between templates and their instances.
TEMPLATE_RELATIONS = NO
# If the ENABLE_PREPROCESSING, SEARCH_INCLUDES, INCLUDE_GRAPH, and HAVE_DOT
# tags are set to YES then doxygen will generate a graph for each documented
# file showing the direct and indirect include dependencies of the file with
# other documented files.
INCLUDE_GRAPH = YES
# If the ENABLE_PREPROCESSING, SEARCH_INCLUDES, INCLUDED_BY_GRAPH, and
# HAVE_DOT tags are set to YES then doxygen will generate a graph for each
# documented header file showing the documented files that directly or
# indirectly include this file.
INCLUDED_BY_GRAPH = YES
# If the CALL_GRAPH and HAVE_DOT options are set to YES then
# doxygen will generate a call dependency graph for every global function
# or class method. Note that enabling this option will significantly increase
# the time of a run. So in most cases it will be better to enable call graphs
# for selected functions only using the \callgraph command.
CALL_GRAPH = YES
# If the CALLER_GRAPH and HAVE_DOT tags are set to YES then
# doxygen will generate a caller dependency graph for every global function
# or class method. Note that enabling this option will significantly increase
# the time of a run. So in most cases it will be better to enable caller
# graphs for selected functions only using the \callergraph command.
CALLER_GRAPH = YES
# If the GRAPHICAL_HIERARCHY and HAVE_DOT tags are set to YES then doxygen
# will generate a graphical hierarchy of all classes instead of a textual one.
GRAPHICAL_HIERARCHY = YES
# If the DIRECTORY_GRAPH, SHOW_DIRECTORIES and HAVE_DOT tags are set to YES
# then doxygen will show the dependencies a directory has on other directories
# in a graphical way. The dependency relations are determined by the #include
# relations between the files in the directories.
DIRECTORY_GRAPH = YES
# The DOT_IMAGE_FORMAT tag can be used to set the image format of the images
# generated by dot. Possible values are svg, png, jpg, or gif.
# If left blank png will be used. If you choose svg you need to set
# HTML_FILE_EXTENSION to xhtml in order to make the SVG files
# visible in IE 9+ (other browsers do not have this requirement).
DOT_IMAGE_FORMAT = png
# If DOT_IMAGE_FORMAT is set to svg, then this option can be set to YES to
# enable generation of interactive SVG images that allow zooming and panning.
# Note that this requires a modern browser other than Internet Explorer.
# Tested and working are Firefox, Chrome, Safari, and Opera. For IE 9+ you
# need to set HTML_FILE_EXTENSION to xhtml in order to make the SVG files
# visible. Older versions of IE do not have SVG support.
INTERACTIVE_SVG = NO
# The tag DOT_PATH can be used to specify the path where the dot tool can be
# found. If left blank, it is assumed the dot tool can be found in the path.
DOT_PATH = @DOXYGEN_DOT_PATH@
# The DOTFILE_DIRS tag can be used to specify one or more directories that
# contain dot files that are included in the documentation (see the
# \dotfile command).
DOTFILE_DIRS =
# The MSCFILE_DIRS tag can be used to specify one or more directories that
# contain msc files that are included in the documentation (see the
# \mscfile command).
MSCFILE_DIRS =
# The DOT_GRAPH_MAX_NODES tag can be used to set the maximum number of
# nodes that will be shown in the graph. If the number of nodes in a graph
# becomes larger than this value, doxygen will truncate the graph, which is
# visualized by representing a node as a red box. Note that doxygen if the
# number of direct children of the root node in a graph is already larger than
# DOT_GRAPH_MAX_NODES then the graph will not be shown at all. Also note
# that the size of a graph can be further restricted by MAX_DOT_GRAPH_DEPTH.
DOT_GRAPH_MAX_NODES = 600
# The MAX_DOT_GRAPH_DEPTH tag can be used to set the maximum depth of the
# graphs generated by dot. A depth value of 3 means that only nodes reachable
# from the root by following a path via at most 3 edges will be shown. Nodes
# that lay further from the root node will be omitted. Note that setting this
# option to 1 or 2 may greatly reduce the computation time needed for large
# code bases. Also note that the size of a graph can be further restricted by
# DOT_GRAPH_MAX_NODES. Using a depth of 0 means no depth restriction.
MAX_DOT_GRAPH_DEPTH = 2
# Set the DOT_TRANSPARENT tag to YES to generate images with a transparent
# background. This is disabled by default, because dot on Windows does not
# seem to support this out of the box. Warning: Depending on the platform used,
# enabling this option may lead to badly anti-aliased labels on the edges of
# a graph (i.e. they become hard to read).
DOT_TRANSPARENT = NO
# Set the DOT_MULTI_TARGETS tag to YES allow dot to generate multiple output
# files in one run (i.e. multiple -o and -T options on the command line). This
# makes dot run faster, but since only newer versions of dot (>1.8.10)
# support this, this feature is disabled by default.
DOT_MULTI_TARGETS = NO
# If the GENERATE_LEGEND tag is set to YES (the default) Doxygen will
# generate a legend page explaining the meaning of the various boxes and
# arrows in the dot generated graphs.
GENERATE_LEGEND = YES
# If the DOT_CLEANUP tag is set to YES (the default) Doxygen will
# remove the intermediate dot files that are used to generate
# the various graphs.
DOT_CLEANUP = YES
diff --git a/doc/manual/CMakeLists.txt b/doc/manual/CMakeLists.txt
index 925e85394..e6d32bd39 100644
--- a/doc/manual/CMakeLists.txt
+++ b/doc/manual/CMakeLists.txt
@@ -1,157 +1,163 @@
#===============================================================================
# @file CMakeLists.txt
#
# @author Guillaume Anciaux <guillaume.anciaux@epfl.ch>
# @author Nicolas Richart <nicolas.richart@epfl.ch>
#
# @date creation: Fri Sep 03 2010
# @date last modification: Wed Jan 06 2016
#
# @brief Build the documentation
#
# @section LICENSE
#
# Copyright (©) 2010-2012, 2014, 2015 EPFL (Ecole Polytechnique Fédérale de
# Lausanne) Laboratory (LSMS - Laboratoire de Simulation en Mécanique des
# Solides)
#
# Akantu is free software: you can redistribute it and/or modify it under the
# terms of the GNU Lesser General Public License as published by the Free
# Software Foundation, either version 3 of the License, or (at your option) any
# later version.
#
# Akantu is distributed in the hope that it will be useful, but WITHOUT ANY
# WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
# A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more
# details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with Akantu. If not, see <http://www.gnu.org/licenses/>.
#
#===============================================================================
#------------------------------------------------------------------------------#
function(get_doc_label pkg_name label)
string(REPLACE "_" "-" _pkg_tex_label_dash ${pkg_name})
string(TOLOWER "${_pkg_tex_label_dash}" _pkg_tex_label)
set(TOLOWER "${_pkg_tex_label_dash}" _pkg_tex_label)
set(${label} "pkg:${_pkg_tex_label}" PARENT_SCOPE)
endfunction()
function(get_doc_package_name pkg_name pkg_tex)
_package_get_option_name(${pkg_name} _opt_name)
string(REPLACE "_" "\\_" _pkg_tex "${_opt_name}")
set(${pkg_tex} ${_pkg_tex} PARENT_SCOPE)
endfunction()
#------------------------------------------------------------------------------#
function(generate_package_dependency_tex_doc pkg_name FILENAME LEVEL)
_package_get_option_name(${pkg_name} _opt_name)
string(REPLACE "_" "\\_" _pkg_tex "${_opt_name}")
get_doc_label(${pkg_name} _pkg_tex_label)
file(APPEND ${FILENAME} "\\AkantuPackageNameWithLabel{${_pkg_tex}}{${_pkg_tex_label}}{${LEVEL}}\\allowbreak\\xspace")
math(EXPR _sub_level "${LEVEL}+1")
_package_get_dependencies(${pkg_name} _dependencies)
foreach(_dep_pkg_name ${_dependencies})
generate_package_dependency_tex_doc(${_dep_pkg_name} ${FILENAME} ${_sub_level})
endforeach()
endfunction()
#------------------------------------------------------------------------------#
function(generate_package_tex_doc pkg_name FILENAME)
get_doc_package_name(${pkg_name} _pkg_tex)
get_doc_label(${pkg_name} _pkg_tex_label)
file(APPEND ${FILENAME} "\n\\begin{AkantuPackage}{${_pkg_tex}}{${_pkg_tex_label}}")
_package_get_documentation(${pkg_name} _doc)
if (_doc)
file(APPEND ${FILENAME} "${_doc}")
else()
_package_get_filename(${pkg_name} _file_path)
_package_get_real_name(${pkg_name} _pkg)
get_filename_component(_file ${_file_path} NAME)
string(REPLACE "_" "\\_" _escaped_file "${_file}")
string(REPLACE "_" "\\_" _escaped_pkg "${_pkg}")
set(_missing_doc
"{\\color{red} TODO}: No Documentation in {\\color{blue} \\href{${_file_path}}{${_escaped_file}}}"
""
"looking for the sequence: "
"\\begin{cmake}"
"\\package_declare_documentation("
" ${_escaped_pkg}"
" \"documentation text\""
" )"
"\\end{cmake}")
set(_missing_doc_str "")
foreach(_str ${_missing_doc})
set(_missing_doc_str "${_missing_doc_str}\n${_str}")
endforeach()
file(APPEND ${FILENAME} "${_missing_doc_str}")
endif()
_package_get_dependencies(${pkg_name} _dependencies)
if(_dependencies)
file(APPEND ${FILENAME} "\n\\begin{AkantuPackageDependencies}")
foreach(_dep_pkg_name ${_dependencies})
generate_package_dependency_tex_doc(${_dep_pkg_name} ${FILENAME} 1)
endforeach()
file(APPEND ${FILENAME} "\n\\end{AkantuPackageDependencies}")
endif()
file(APPEND ${FILENAME} "\n\\end{AkantuPackage}
")
endfunction()
#------------------------------------------------------------------------------#
#------------------------------------------------------------------------------#
-set(DOC_DEPS_TEX_FILENAME "${CMAKE_CURRENT_BINARY_DIR}/manual-packages-doc.tex")
+set(AKANTU_MANUAL_SOURCE_FOLDER ${CMAKE_CURRENT_BINARY_DIR}/latex)
+
+set(DOC_DEPS_TEX_FILENAME "${AKANTU_MANUAL_SOURCE_FOLDER}/manual-packages-doc.tex")
file(WRITE ${DOC_DEPS_TEX_FILENAME} "")
find_program(RUBBER_EXECUTABLE rubber)
if (NOT RUBBER_EXECUTABLE)
message(ERROR "Manual cannot be built without rubber latex compiler")
endif()
mark_as_advanced(RUBBER_EXECUTABLE)
package_get_all_documentation_files(_manual_files)
set(AKANTU_MANUAL_FILES_DEPEND)
set(AKANTU_MANUAL_FILES_COPY_COMMAND)
+
+file(MAKE_DIRECTORY ${AKANTU_MANUAL_SOURCE_FOLDER})
foreach(_f ${_manual_files})
file(RELATIVE_PATH _rel_f ${CMAKE_CURRENT_SOURCE_DIR} "${_f}")
list(APPEND AKANTU_MANUAL_FILES_DEPEND ${_f})
list(APPEND AKANTU_MANUAL_FILES_COPY_COMMAND
- COMMAND ${CMAKE_COMMAND} -E copy_if_different ${CMAKE_CURRENT_SOURCE_DIR}/${_rel_f} ${_rel_f})
+ COMMAND ${CMAKE_COMMAND} -E copy_if_different "${CMAKE_CURRENT_SOURCE_DIR}/${_rel_f}" "${_rel_f}")
endforeach()
set(MANUAL_OUTPUT ${CMAKE_CURRENT_BINARY_DIR}/akantu_ug.pdf)
add_custom_command(
OUTPUT ${MANUAL_OUTPUT}
DEPENDS ${AKANTU_MANUAL_FILES_DEPEND} ${DOC_DEPS_TEX_FILENAME}
${AKANTU_MANUAL_FILES_COPY_COMMAND}
COMMAND ${RUBBER_EXECUTABLE} -dfq manual
- COMMAND ${CMAKE_COMMAND} -E rename ${CMAKE_CURRENT_BINARY_DIR}/manual.pdf ${MANUAL_OUTPUT}
- WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
+ COMMAND ${CMAKE_COMMAND} -E copy manual.pdf ${MANUAL_OUTPUT}
+ WORKING_DIRECTORY ${AKANTU_MANUAL_SOURCE_FOLDER}
COMMENT "Compiling the user's manual"
)
+set_directory_properties(latex/$)
+
add_custom_target(manual ALL DEPENDS ${MANUAL_OUTPUT})
install(FILES ${MANUAL_OUTPUT} DESTINATION share/akantu-${AKANTU_VERSION}/doc)
package_get_all_activated_packages(_package_list)
foreach (_pkg_name ${_package_list})
generate_package_tex_doc(${_pkg_name} ${DOC_DEPS_TEX_FILENAME})
endforeach()
-configure_file(version-definition.tex.in "${CMAKE_CURRENT_BINARY_DIR}/version-definition.tex" @ONLY)
+configure_file(version-definition.tex.in "${AKANTU_MANUAL_SOURCE_FOLDER}/version-definition.tex" @ONLY)
diff --git a/python/CMakeLists.txt b/python/CMakeLists.txt
index dd8275dc9..586806c13 100644
--- a/python/CMakeLists.txt
+++ b/python/CMakeLists.txt
@@ -1,289 +1,300 @@
#===============================================================================
# @file CMakeLists.txt
#
# @author Nicolas Richart <nicolas.richart@epfl.ch>
#
# @date creation: Fri Dec 12 2014
# @date last modification: Mon Jan 18 2016
#
# @brief CMake file for the python wrapping of akantu
#
# @section LICENSE
#
# Copyright (©) 2015 EPFL (Ecole Polytechnique Fédérale de Lausanne) Laboratory
# (LSMS - Laboratoire de Simulation en Mécanique des Solides)
#
# Akantu is free software: you can redistribute it and/or modify it under the
# terms of the GNU Lesser General Public License as published by the Free
# Software Foundation, either version 3 of the License, or (at your option) any
# later version.
#
# Akantu is distributed in the hope that it will be useful, but WITHOUT ANY
# WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
# A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more
# details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with Akantu. If not, see <http://www.gnu.org/licenses/>.
#
#===============================================================================
#===============================================================================
# Configuration
#===============================================================================
package_get_all_definitions(AKANTU_DEFS)
list(REMOVE_ITEM AKANTU_DEFS AKANTU_CORE_CXX11)
#message(${AKANTU_DEFS})
set(AKA_DEFS "")
foreach (def ${AKANTU_DEFS})
list(APPEND AKA_DEFS "-D${def}")
endforeach()
set(AKANTU_SWIG_FLAGS -w309,325,401,317,509,503,383,384 ${AKA_DEFS})
set(AKANTU_SWIG_OUTDIR ${CMAKE_CURRENT_SOURCE_DIR})
set(AKANTU_SWIG_MODULES swig/akantu.i)
#===============================================================================
# Swig wrapper
#===============================================================================
set(SWIG_REQURIED_VERISON 3.0)
find_package(SWIG ${SWIG_REQURIED_VERISON})
find_package(PythonInterp 2.7 REQUIRED)
mark_as_advanced(SWIG_EXECUTABLE)
package_get_all_include_directories(
AKANTU_LIBRARY_INCLUDE_DIRS
)
package_get_all_external_informations(
AKANTU_EXTERNAL_INCLUDE_DIR
AKANTU_EXTERNAL_LIBRARIES
)
set(_swig_include_dirs
${CMAKE_CURRENT_SOURCE_DIR}/swig
${AKANTU_LIBRARY_INCLUDE_DIRS}
${PROJECT_BINARY_DIR}/src
${AKANTU_EXTERNAL_INCLUDE_DIR}
)
include(CMakeParseArguments)
function(swig_generate_dependencies _module _depedencies _depedencies_out)
set(_dependencies_script "${CMAKE_CURRENT_BINARY_DIR}${CMAKE_FILES_DIRECTORY}/_swig_generate_dependencies.cmake")
file(WRITE ${_dependencies_script} "
set(_include_directories ${_include_directories})
list(APPEND _include_directories \"./\")
set(_dep)
set(_files_to_process \${_module})
while(_files_to_process)
list(GET _files_to_process 0 _file)
list(REMOVE_AT _files_to_process 0)
file(STRINGS \${_file} _file_content REGEX \"^%include *\\\"(.*)\\\"\")
set(_includes)
foreach(_line \${_file_content})
string(REGEX REPLACE \"^%include *\\\"(.*)\\\"\" \"\\\\1\" _inc \${_line})
if(_inc)
list(APPEND _includes \${_inc})
endif()
endforeach()
foreach(_include \${_includes})
unset(_found)
foreach(_inc_dir \${_include_directories})
if(EXISTS \${_inc_dir}/\${_include})
set(_found \${_inc_dir}/\${_include})
break()
endif()
endforeach()
if(_found)
list(APPEND _files_to_process \${_found})
list(APPEND _dep \${_found})
endif()
endforeach()
endwhile()
get_filename_component(_module_we \"\${_module}\" NAME_WE)
set(_dependencies_file \${CMAKE_CURRENT_BINARY_DIR}\${CMAKE_FILES_DIRECTORY}/_swig_\${_module_we}_depends.cmake)
file(WRITE \"\${_dependencies_file}\"
\"set(_swig_\${_module_we}_depends\")
foreach(_d \${_dep})
file(APPEND \"\${_dependencies_file}\" \"
\${_d}\")
endforeach()
file(APPEND \"\${_dependencies_file}\" \"
)\")
")
get_filename_component(_module_absolute "${_module}" ABSOLUTE)
get_filename_component(_module_we "${_module}" NAME_WE)
set(_dependencies_file ${CMAKE_CURRENT_BINARY_DIR}${CMAKE_FILES_DIRECTORY}/_swig_${_module_we}_depends.cmake)
if(EXISTS ${_dependencies_file})
include(${_dependencies_file})
else()
execute_process(COMMAND ${CMAKE_COMMAND}
-D_module=${_module_absolute}
-P ${_dependencies_script}
WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR})
include(${_dependencies_file})
endif()
set(${_depedencies_out} ${_swig_${_module_we}_depends} PARENT_SCOPE)
add_custom_command(OUTPUT ${_dependencies_file}
COMMAND ${CMAKE_COMMAND}
-D_module=${_module_absolute}
-P ${_dependencies_script}
COMMENT "Scanning dependencies for swig module ${_module_we}"
WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
MAIN_DEPENDENCY ${_module_absolute}
DEPENDS ${_swig_${_module_we}_depends}
)
set(${_depedencies} ${_dependencies_file} PARENT_SCOPE)
endfunction()
function(swig_generate_wrappers project _wrappers_cpp _wrappers_py)
cmake_parse_arguments(_swig_opt "" "OUTPUT_DIR;DEPENDENCIES" "EXTRA_FLAGS;INCLUDE_DIRECTORIES" ${ARGN})
if(_swig_opt_OUTPUT_DIR)
set(_output_dir ${_swig_opt_OUTPUT_DIR})
else()
set(_output_dir ${CMAKE_CURRENT_BINARY_DIR})
endif()
set(_swig_wrappers)
get_directory_property(_include_directories INCLUDE_DIRECTORIES)
list(APPEND _include_directories ${_swig_opt_INCLUDE_DIRECTORIES})
if(_include_directories)
string(REPLACE ";" ";-I" _swig_include_directories "${_include_directories}")
endif()
foreach(_module ${_swig_opt_UNPARSED_ARGUMENTS})
swig_generate_dependencies(${_module} _module_dependencies _depends_out)
if(_swig_opt_DEPENDENCIES)
set(${_swig_opt_DEPENDENCIES} ${_depends_out} PARENT_SCOPE)
endif()
get_filename_component(_module_absolute "${_module}" ABSOLUTE)
get_filename_component(_module_path "${_module_absolute}" PATH)
get_filename_component(_module_name "${_module}" NAME)
get_filename_component(_module_we "${_module}" NAME_WE)
- set(_wrapper "${_output_dir}/${_module_we}_wrapper.cc")
+ set(_wrapper "${_output_dir}/${_module_we}_wrapper.cpp")
set(_extra_wrapper "${_output_dir}/${_module_we}.py")
set(_extra_wrapper_bin "${CMAKE_CURRENT_BINARY_DIR}/${_module_we}.py")
if(SWIG_FOUND)
set_source_files_properties("${_wrapper}" PROPERTIES GENERATED 1)
set_source_files_properties("${_extra_wrapper}" PROPERTIES GENERATED 1)
set(_dependencies_file ${CMAKE_CURRENT_BINARY_DIR}${CMAKE_FILES_DIRECTORY}/_swig_${_module_we}_depends.cmake)
set(_ouput "${_wrapper}" "${_extra_wrapper}")
add_custom_command(
OUTPUT ${_ouput}
COMMAND "${SWIG_EXECUTABLE}"
ARGS -python -c++
${_swig_opt_EXTRA_FLAGS}
-outdir ${_output_dir}
-I${_swig_include_directories} -I${_module_path}
-o "${_wrapper}"
"${_module_absolute}"
COMMAND ${CMAKE_COMMAND} -E copy_if_different ${_extra_wrapper} ${_extra_wrapper_bin}
# MAIN_DEPENDENCY "${_module_absolute}"
DEPENDS ${_module_dependencies}
COMMENT "Generating swig wrapper ${_module} -> ${_wrapper}"
)
list(APPEND _swig_wrappers ${_wrapper})
list(APPEND _swig_wrappers_py "${_extra_wrapper_bin}")
else()
if(NOT EXISTS ${_wrapper} OR NOT EXISTS "${_extra_wrapper}")
message(FATAL_ERROR "The file ${_wrapper} and/or ${_extra_wrapper} does "
"not exists and they cannot be generated. Install swig ${SWIG_REQURIED_VERISON} "
" in order to generate them. Or get them from a different machine, "
"in order to be able to compile the python interface")
else()
list(APPEND _swig_wrappers "${_wrapper}")
list(APPEND _swig_wrappers_py "${_extra_wrapper_bin}")
endif()
endif()
endforeach()
add_custom_target(${project}_generate_swig_wrappers DEPENDS ${_swig_wrappers})
set(${_wrappers_cpp} ${_swig_wrappers} PARENT_SCOPE)
set(${_wrappers_py} ${_swig_wrappers_py} PARENT_SCOPE)
endfunction()
swig_generate_wrappers(akantu AKANTU_SWIG_WRAPPERS_CPP AKANTU_WRAPPERS_PYTHON
${AKANTU_SWIG_MODULES}
EXTRA_FLAGS ${AKANTU_SWIG_FLAGS}
DEPENDENCIES _deps
INCLUDE_DIRECTORIES ${_swig_include_dirs})
if(AKANTU_SWIG_WRAPPERS_CPP)
- string(REPLACE ";" "\", \"" _ext_files "${AKANTU_SWIG_WRAPPERS_CPP}")
- string(REPLACE ";" "\", \"" _inc_dirs "${_swig_include_dirs}")
- string(REPLACE " " "\", \"" _flags "${CMAKE_CXX_FLAGS} -Wmaybe-uninitialized")
+ string(REPLACE ";" "', '" _ext_files "${AKANTU_SWIG_WRAPPERS_CPP}")
+ string(REPLACE ";" "', '" _inc_dirs "${_swig_include_dirs}")
+ string(STRIP "${CMAKE_CXX_FLAGS}" _tmp_flags)
+ string(REGEX REPLACE " +" "', '" _flags "${_tmp_flags} -Wmaybe-uninitialized")
+
+ if(CMAKE_VERBOSE_MAKEFILE)
+ set(_quiet)
+ else()
+ set(_quiet --quiet)
+ endif()
file(WRITE ${CMAKE_CURRENT_BINARY_DIR}/setup.py "
from distutils.core import setup
from distutils.core import setup, Extension
import os
-os.environ[\"CC\"] = \"${CMAKE_CXX_COMPILER}\"
-os.environ[\"CXX\"] = \"${CMAKE_CXX_COMPILER}\"
-setup(name=\"akantu\",
- license=\"LGPLv3\",
- version=\"${AKANTU_VERSION}\",
- py_modules=[\"akantu\"],
- ext_modules=[Extension(\"_akantu\", [\"${_ext_files}\"],
- include_dirs=[\"${_inc_dirs}\"],
- language=\"c++\",
- libraries=[\"akantu\"],
- library_dirs=[\"${PROJECT_BINARY_DIR}/src\"],
- extra_compile_args=[\"${_flags}\"])],
+
+os.environ['CC'] = '${CMAKE_CXX_COMPILER}'
+os.environ['CXX'] = '${CMAKE_CXX_COMPILER}'
+setup(name='akantu',
+ license='LGPLv3',
+ version='${AKANTU_VERSION}',
+ py_modules=['akantu'],
+ ext_modules=[Extension('_akantu', ['${_ext_files}'],
+ include_dirs=['${_inc_dirs}'],
+ language='c++',
+ libraries=['akantu'],
+ library_dirs=['${PROJECT_BINARY_DIR}/src'],
+ extra_compile_args=['${_flags}'])],
)
")
add_custom_target(_akantu ALL
- COMMAND ${PYTHON_EXECUTABLE} ./setup.py --quiet --no-user-cfg build_ext
+ COMMAND ${PYTHON_EXECUTABLE} ./setup.py ${_quiet} --no-user-cfg build_ext -b build
WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
DEPENDS ${AKANTU_SWIG_WRAPPERS_CPP} akantu
COMMENT "Building akantu's python interface"
)
+ set_directory_properties(PROPERTIES
+ ADDITIONAL_MAKE_CLEAN_FILES ${CMAKE_CURRENT_BINARY_DIR}/build)
+
# add_library(_akantu MODULE ${AKANTU_SWIG_WRAPPERS_CPP})
# target_link_libraries(_akantu akantu)
# set_target_properties(_akantu PROPERTIES PREFIX "")
# list(APPEND AKANTU_EXPORT_LIST _akantu)
# install(TARGETS _akantu
# EXPORT ${AKANTU_TARGETS_EXPORT}
# LIBRARY DESTINATION lib COMPONENT python NAMELINK_SKIP # for real systems
# ARCHIVE DESTINATION lib COMPONENT python
# RUNTIME DESTINATION bin COMPONENT python # for windows ...
# )
# install(FILES ${AKANTU_WRAPPERS_PYTHON}
# DESTINATION lib COMPONENT python
# )
install(CODE "execute_process(
- COMMAND ${PYTHON_EXECUTABLE} ./setup.py --quiet install --prefix=${AKANTU_PYTHON_INSTALL_PREFIX}
+ COMMAND ${PYTHON_EXECUTABLE} ./setup.py ${_quiet} install --prefix=${AKANTU_PYTHON_INSTALL_PREFIX}
WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
)"
COMPONENT python)
package_declare_extra_files_to_package(python_interface ${_deps} ${PROJECT_SOURCE_DIR}/python/${AKANTU_SWIG_MODULES})
endif()